Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03- 21] 17 sequences; 11,929,789 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq5 244 1e-59 seq9 141 1e-28 >seq5 Length=1007496 Score = 244 bits (270), Expect = 1e-59 Identities = 847/1301 (65%), Gaps = 54/1301 (4%) Strand=Plus/Plus Query 111720 CCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCA 111779 ||||| | || || |||||||| |||| ||| ||||||||| ||||||| | | || Sbjct 296326 CCAACTTTGTTTAATGCTGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTGGTCGCC 296385 Query 111780 AACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCA 111839 | |||||||| || ||| | || ||||||| |||| | | |||||||| || || Sbjct 296386 ATGAAGGAGGACTCTATCGAGGGTATTTACGACACTTTGAAAGAATGTGCTTTGATTTCC 296445 Query 111840 AAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAG-TCTCGTAT 111898 || ||||||||||| || | || || ||| | | | |||| | ||| || Sbjct 296446 AAAACTGCTGGTGGTATTGGTCTACATATTCATAACATTCG-TTCAACTGGTTCTTACAT 296504 Query 111899 TAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCAC 111958 | |||||||||||| || | || | ||||| ||| |||| || ||||| || Sbjct 296505 TGCTGGTACAAATGGTACTTCTAACGGGTTAATTCCCATGATTCGTGTTTTTAATAATAC 296564 Query 111959 AGCGCGCTATGTAAACCAAGCTGGGCGTCGCAAGGGATCT------ATCGCAGTCTATCT 112012 || || ||||| |||| | || || ||| || || | || | || || Sbjct 296565 CGCCCGTTATGTCGACCAGGGTG---GTAACAAAAGACCTGGTGCCTTTGCTCTGTACCT 296621 Query 112013 TGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGA 112072 || |||||||| || |||||| | || || |||| | | ||||| ||| | || Sbjct 296622 GGAACCATGGCATGCTGATATCTTTGATTTTATTGATATCAGAAAGAACCACGGTAAAGA 296681 Query 112073 GGAGGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGA 112131 || | |||| | ||| | || | ||||| |||||||| ||||| |||||||| Sbjct 296682 AGAAATTC-GTGCAAGAGATTTGTTTCCTGCTCTGTGGATTCCTGATCTTTTCATGAAAC 296740 Query 112132 GAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACA-AGGCACCCGGTCTCTCC 112190 | || || || | ||| | |||| || | || | |||| ||| || |||||||| | Sbjct 296741 GTGTCGAAGAAAATGGGACTTGGACTTTGTTCTCTCCA-ACAGCAGCTCCCGGTCTAAGC 296799 Query 112191 GATGCCGT--GGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGG 112248 || | || ||||| || |||||||| || || || ||||| ||||| |||| | Sbjct 296800 GA--CTGTTACGGTGACGATTTTGAAGCTCTATATACCCGCTACGAAAAAGAAGGTCGTG 296857 Query 112249 CGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGA 112308 | ||| | |||| | | ||| | | ||| | | | ||||| || | Sbjct 296858 ---GTAAGACCATTAAAGCTCAAAAATTATGGTATTCCATTTTGGAAGCACAAACTGAAA 296914 Query 112309 CTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATT 112368 |||||||||| | | || |||| || || || || ||| |||| ||| ||||| || | Sbjct 296915 CTGGTACACCTTTTGTGGTTTATAAGGATGCTTGCAACAGAAAGTCTAACCAAAAAAACT 296974 Query 112369 TGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATG 112428 ||||||| |||||| || ||| | || ||||| | || | ||| || | Sbjct 296975 TGGGTGTTATCAAGTCATCGAACTTATGCTGTGAAATTGTTGAGTACTCAGCTCCGGACG 297034 Query 112429 AGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGT--ATGTGGATC--CAGA- 112483 | || ||||| |||||| | || || | || | || || || || | | |||| Sbjct 297035 AAACTGCTGTTTGTAACTTGGCTTCCGTTGCCTTGCCAGCGTTCAT-TGAAACGTCAGAG 297093 Query 112484 ----GACAAA----GACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACA 112535 | |||| || | | | ||||| | |||||| || | ||| ||| || Sbjct 297094 GACGGCCAAACTTCTACTTACAACTTCAAAAAATTACACGAAATTGCCAAAGTTGTTACT 297153 Query 112536 AAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCT 112595 || ||||||||||||||||| | |||| |||||| |||| || | | ||| Sbjct 297154 CGTAATTTAAACAGAGTTATTGATCGTAATTACTACCCCATTGAAGAAGCGAGAAGATCC 297213 Query 112596 AATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCA-TTCT 112654 ||||||||||| | ||||||| | ||||| |||||| | || || || || | Sbjct 297214 AATATGAGACATAGGCCAATTGCCTTGGGTGTTCAAGGTTTGGCTGA------CACTTTT 297267 Query 112655 TTGTCGCCACG-----CATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTT 112709 ||| || ||| | |||||||| || || || | | ||| | || ||| Sbjct 297268 ATGTTGCTACGTTTACCCTTTGATTCTGAAGAGGCCCGTTTACTAAATATCCAAATCTTT 297327 Query 112710 GAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCA 112769 || ||||| ||||| ||| | | || || || || || || | || || ||| Sbjct 297328 GAAACAATTTATCATGCCTCCATGGAAGCTTCTTGTGAATTAGCTCAAAAGGACGGCCCA 297387 Query 112770 TATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAA 112829 || |||||||| | |||||||||||||| ||||| | ||||| || |||||||||| | Sbjct 297388 TACGAAACCTTCCAAGGTTCTCCAGCTTCTCAAGGTATACTTCAGTTCGATATGTGGG-A 297446 Query 112830 GGTGAGACCAAGCTTCA-CTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGG 112888 | ||| | || | || |||||| || | | | || ||| | | | || Sbjct 297447 CCAAAAACCCTACGGCATGTGGGATTGGGACACTTTGAGGAAAGATGTCATGAAACATGG 297506 Query 112889 TCTTCGTAACAGTCTTT--TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTG 112946 | || | ||| ||||| |||||||||||||| || || ||||| | ||||| ||| Sbjct 297507 TATTAGAAAC--TCTTTGACCATGGCACCAATGCCTACTGCATCCACATCCCAAATATTG 297564 Query 112947 GGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA 112987 ||| |||||||||| |||||||| ||| | ||||| || Sbjct 297565 GGTTATAATGAATGTTTTGAACCAGTCACCTCTAACATGTA 297605 >seq9 Length=439147 Score = 141 bits (156), Expect = 1e-28 Identities = 559/866 (65%), Gaps = 24/866 (3%) Strand=Plus/Minus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 |||||| || || | ||||| || ||| | |||||||| || ||||| || ||||| Sbjct 235862 CCACAGCACTTGGTTATGCGTGTGGCGCTGGGTATCCACGGTAGTGATATCGAGTCTGTG 235803 Query 111672 TTGGAGACATACGACAAGATGTCCCGT---GGTATGTTCATCCACGCAACACCAACCCTC 111728 || |||| ||| | |||||| || | ||| |||| ||||| | |||||| | Sbjct 235802 CTGAAGACCTACAATTTGATGTC--GTTAAGATAT-TTCACTCACGCTTCCCCAACCTTA 235746 Query 111729 TTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAG 111788 |||||||||||||| ||| ||||||||||| |||||||| ||||| | ||||| Sbjct 235745 TTCAACGCTGGTACTCCACATCCCCAAATGTCTTCATGTTTCCTAATTGCCATGAAGGAT 235686 Query 111789 GATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCT 111848 || || || | |||||||| | ||| | | |||||||| || || ||| || Sbjct 235685 GACTCTATTGAAGGCATTTATGATACTTTGAAAGAATGTGCTATGATTTCTAAGACTGCA 235626 Query 111849 GGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAG-TCTCGTATTAGAGGTAC 111907 |||||| | || | || || | | || | || ||| | ||| ||| ||||| Sbjct 235625 GGTGGTGTTGGTCTTCATATTAACAACATCCGTTCC-ACAGGTTCTTATATCGCCGGTAC 235567 Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967 || ||| || |||| | ||||| ||| |||| || || ||| || || || || Sbjct 235566 TAACGGTACTTCGAATGGGTTGATTCCTATGATTCGTGTTTTCAACAATACTGCTCGTTA 235507 Query 111968 TGTAAACCAAGCTGGGCGTCGCAAGGGATCTATCGC-----AGTCTATCTT-GAGCCATG 112021 ||| ||||| || || |||| || || || | | |||| || ||||| Sbjct 235506 TGTGGACCAA---GGAGGTAACAAGAGACCTGGTGCCTTTGCGCTTTTCTTGGAACCATG 235450 Query 112022 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCG 112081 ||| || |||||| | || || | || | | | ||| ||| | || || | Sbjct 235449 GCATGCAGATATCTTCGACTTTGTCGATATTAGAAAAACCCATGGTAAAGAAGA-AATCC 235391 Query 112082 GTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 112140 |||| | ||| | ||| | ||||| |||||||| || || || ||||| | ||| | | Sbjct 235390 GTGCAAGGGATTTGTTCCCTGCTCTGTGGATTCCTGACCTTTTTATGAAACGTGTTCAAG 235331 Query 112141 AGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGG 112200 || ||| ||| || | |||| ||| || || ||| | |||| | || Sbjct 235330 AGGATGGGCCCTGGACTTTATTTTCTCCCAGTGCTGCCCCAGGTTTAGATGATGTCTGGG 235271 Query 112201 GTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGG 112260 |||| || ||||||| || || || ||||| ||| |||| | | || Sbjct 235270 GTGATGAATTTGAAGAGCTATATACCCGTTACGAAAGGGAAGGTCGTG---GTAAAACCA 235214 Query 112261 TGCCAGCTGCCGATGTGTGGAAAGCTAT-TCTCAAGTCTCAAACCGAGACTGGTACACCA 112319 | ||| | | ||| | || || | |||| | ||||| || || |||||||| Sbjct 235213 TTAAAGCCCAAAAGTTATGGTATGCAATCTTACAAG-CACAAACAGAAACAGGTACACCT 235155 Query 112320 TATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 112379 | ||| ||||||| ||| | ||||| ||||| || ||| |||| |||||| || Sbjct 235154 TTCATGGTTTACAAGGACTCATGTAATAGAAAGACAAACCAACAGAACTTGGGTACCATT 235095 Query 112380 AAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 112439 || ||||| | ||| |||||| | || | | | | |||||| || || || Sbjct 235094 AAATCATCCAATTTGTGTTGTGAAATCGTCGAGTATTCTTCCCCAGATGAAACTGCCGTT 235035 Query 112440 TGTAACCTCGCATCAATCGCTCTCCC 112465 ||||| || || || || |||||||| Sbjct 235034 TGTAATCTAGCCTCTATTGCTCTCCC 235009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742268092240