Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03- 21] 17 sequences; 11,929,789 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq5 134 2e-26 >seq5 Length=1007496 Score = 134 bits (148), Expect = 2e-26 Identities = 770/1221 (63%), Gaps = 26/1221 (2%) Strand=Plus/Minus Query 109918 TCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTAC 109977 ||||||||||| ||||||| ||| | || ||| |||||||| | ||| | ||||| Sbjct 297446 TCCCACATATCGAACTGAAGTATACCTTGAGAAGCTGGAGAACCTTGGAAGGTTTCGTAT 297387 Query 109978 GACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCA 110037 | || || | || || || | ||||| || | | |||||||| || || ||| Sbjct 297386 GGGCCGTCCTTTTGAGCTAATTCACAAGAAGCTTCCATGGAGGCATGATAAATTGTTTCA 297327 Query 110038 AAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATA 110097 || || || ||| | | || | ||||||| | || ||||| | || | ||| Sbjct 297326 AAGATTTGGATATTTAGTAAACGGGCCTCTTCAGAATCAAAGGGTAAACGTAGCAACATA 297267 Query 110098 AACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGT 110157 || || || | ||| |||||||| | |||| || | ||| |||| || || | | Sbjct 297266 AAAGTGTCAGCCAAACCTTGAACACCCAAGGCAATTGGCCTATGTCTCATATTGGATCTT 297207 Query 110158 CGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACA 110217 | || ||| | |||||| | || || || || || | || | ||| || ||| Sbjct 297206 CTCGCTTCTTCAATGGGGTAGTAATTACGATCAATAACTCTGTTTAAATTACGAGTAACA 297147 Query 110218 GTCTTCGTGATTTCATGGAGTTT------GTCGTAA-TCGAACGTTTT--CGTCTCCTTA 110268 || | ||||| || | ||| || |||| | ||| |||| |||| || | Sbjct 297146 ACTTTGGCAATTTCGTGTAATTTTTTGAAGTTGTAAGTAGAA-GTTTGGCCGTCCTCTGA 297088 Query 110269 --TTGACATATTTG--GGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTT 110324 || || | || | |||| || || | || || |||| ||| ||||| Sbjct 297087 CGTTTCAATGAACGCTGGCAAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCGTCCGG 297028 Query 110325 GTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTT 110384 | | ||| || | |||||| || ||||| || ||| || ||||||||||| || Sbjct 297027 AGCTGAGTACTCAACAATTTCACAGCATAAGTTCGATGACTTGATAACACCCAAGTTTTT 296968 Query 110385 CTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGT 110444 || || || || |||||| ||||||||||| | || | || ||||||||||| || Sbjct 296967 TTGGTTAGACTTTCTGTTGCAAGCATCCTTATAAACCACAAAAGGTGTACCAGTTTCAGT 296908 Query 110445 CTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACC 110504 |||| | | ||||| | ||||| | || | || ||| | |||| Sbjct 296907 TTGTGCTTCCAAAATGGAATACCATAATTTTTGAGCTTTAATGGTC---TTACCACGACC 296851 Query 110505 TTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACA-TCAGAAAGAC 110563 ||| | ||||| ||| || | | ||||| || | ||||| ||| || |||| Sbjct 296850 TTCTTTTTCGTAGCGGGTATATAGAGCTTCAAAATCGTCACCGTA-ACAGTCGCTTAGAC 296792 Query 110564 CCTTCGCCT-TGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATG 110622 | || ||| || | |||| | | |||| | ||| || || || | |||||| Sbjct 296791 CGGGAGCTGCTGTTGG-AGAGAACAAAGTCCAAGTCCCATTTTCTTCGACACGTTTCATG 296733 Query 110623 AACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCT 110682 || || ||||||||||||| || | || | || | |||| ||||| | ||| Sbjct 296732 AAAAGATCAGGAATCCACAGAGCAGGAAACAAATCTCTTGCACGAATTTCTTCTTTACCG 296673 Query 110683 TGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACA 110742 ||||| | | || | ||| || | |||||| | ||||||||||| || || | | Sbjct 296672 TGGTTCTTTCTGATATCAATAAAATCAAAGATATCAGCATGCCATGGTTCCAGGTACAGA 296613 Query 110743 GCGATGGATCC----CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAA 110798 || | || || ||| | ||| |||||| ||||| || || || ||| || Sbjct 296612 GCAAAGGCACCAGGTCTTTTG-TTACCACCCTGGTCGACATAACGGGCGGTATTATTAAA 296554 Query 110799 GACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTT 110858 || | | ||| ||||| | || | || |||||||||||| ||| || Sbjct 296553 AACACGAATCATGGGAATTAACCCGTTAGAAGTACCATTTGTACCAGCAATGTAAGAACC 296494 Query 110859 ATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGC 110918 | | | |||||||| || ||||| | |||||||||||| || || ||| || Sbjct 296493 AGTTGAACGAATGTTATGAATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGC 296434 Query 110919 ACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAA 110978 ||| ||| | | || | |||||||| || || || || |||| |||| | | || Sbjct 296433 ACATTCTTTCAAAGTGTCGTAAATACCCTCGATAGAGTCCTCCTTCATGGCGACCAAGAA 296374 Query 110979 GCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAAT 111038 ||||| ||||| ||||| || || || ||||| || | || || | |||||| | Sbjct 296373 ACAAGAGGACATTTGAGGTTTTGGAGTACCAGCATTAAACAAAGTTGGAGAGGCATGAGT 296314 Query 111039 GAACAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTG 111098 || | | ||||| ||| ||||| || || || | | ||| ||||||| Sbjct 296313 AAAGTATTTTAGAGACATTAAGTTATATGTTTCTAGAGCAGCTTCGATGTCTCTACCGTG 296254 Query 111099 AATACCAATGGCAACTCGCAT 111119 || || | || |||| ||| Sbjct 296253 GATGCCCAGTGCGACTCTCAT 296233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975874842600