Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03- 21] 17 sequences; 11,929,789 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq5 295 8e-75 seq9 219 5e-52 >seq5 Length=1007496 Score = 295 bits (326), Expect = 8e-75 Identities = 913/1399 (65%), Gaps = 34/1399 (2%) Strand=Plus/Minus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 || ||||| | ||| |||||||| |||||||||| |||||| ||||| | ||||| Sbjct 297605 TACATGTTAGAGGTGACTGGTTCAAAACATTCATTATAACCCAATATTTGGGATGTGGAT 297546 Query 105995 GCTGTTGGCATTGGTGCCATCA--AAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTT 106052 || || |||||||||||||| ||||| ||| | || ||| | || | ||| || Sbjct 297545 GCAGTAGGCATTGGTGCCATGGTCAAAGA--GTTTCTAATACCATGTTTCATGACATCTT 297488 Query 106053 CCTTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAA 106112 | | | | ||||| || | || | || || ||||||||||| || |||| Sbjct 297487 TCCTCAAAGTGTCCCAATCCCACATGCCGTAGGGTTTTTGGTCCCACATATCGAACTGAA 297428 Query 106113 GCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCA 106172 | | ||||| || | |||||||| | || || || || | || | || ||| | Sbjct 297427 GTATACCTTGAGAAGCTGGAGAACCTTGGAAGGTTTCGTATGGGCCGTCCTTTTGAGCTA 297368 Query 106173 ATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCT 106232 ||||||| || |||| ||| || ||||| || ||||||||||| | ||| | Sbjct 297367 ATTCACAAGAAGCTTCCATGGAGGCATGATAAATTGTTTCAAAGATTTGGATATTTAGTA 297308 Query 106233 CCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTT 106292 ||| || || |||||||| | | || ||| ||||| || || | ||||| Sbjct 297307 AACGGGCCTCTTCAGAATCAAAGGGTAAACGTAGCAACATAAAAGTGTCAGCCAAACCTT 297248 Query 106293 GAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGAT 106352 |||||||||| |||| || || |||| |||||| || ||| ||| |||| ||| | Sbjct 297247 GAACACCCAAGGCAATTGGCCTATGTCTCATATTGGATCTTCTCGCTTCTTCAATGGGGT 297188 Query 106353 AAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATG-A 106411 | |||| | ||||| |||| ||||| ||| ||||||| || | ||||| || | Sbjct 297187 AGTAATTACGATCAATAACTCTGTTTAAATTACGAGTAACAACTTTGGCAATTTCGTGTA 297128 Query 106412 AGTTTTTCA-----TAATCAAAAGTGCGA--GTC-TCT------TCATTGACATACTTTG 106457 | ||||| | ||| | |||| | ||| ||| ||| ||| || || Sbjct 297127 ATTTTTTGAAGTTGTAAGTAGAAGTTTGGCCGTCCTCTGACGTTTCAATGA---ACGCTG 297071 Query 106458 GAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAA 106517 | | ||| | || ||||| || |||||||| || || ||| | ||| |||||| | || Sbjct 297070 GCAAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCGTCCGGAGCTGAGTACTCAACAA 297011 Query 106518 TTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGT 106577 |||| || ||||| || ||| || ||||| || ||||||||| |||| ||| Sbjct 297010 TTTCACAGCATAAGTTCGATGACTTGATAACACCCAAGTTTTTTTGGTTAGACTTTCTGT 296951 Query 106578 TGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTG 106637 |||| |||||||| || | || | || || || || || || |||| | | ||| | Sbjct 296950 TGCAAGCATCCTTATAAACCACAAAAGGTGTACCAGTTTCAGTTTGTGCTTCCAAAATGG 296891 Query 106638 CCTTCCACACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTG 106697 | ||| | | ||| ||||| || | || || || ||||| | Sbjct 296890 AATACCATAATTTTTGAGCTTT---AATGGTCTTACCACGACCTTCTTTTTCGTAGCGGG 296834 Query 106698 TGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCT-TGTCTGGA 106756 | || || |||||||| || ||||| |||| ||||| || || ||| |||| Sbjct 296833 TATATAGAGCTTCAAAATCGTCACCGTAACAGTCGCTTAGACCGGGAGCTGCTGT-TGGA 296775 Query 106757 CAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCAC 106816 |||| | || ||| ||| || || || || ||||||||||| || ||||||||| Sbjct 296774 GAGAACAAAGTCCAAGTCCCATTTTCTTCGACACGTTTCATGAAAAGATCAGGAATCCAC 296715 Query 106817 AGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCA 106876 || | | ||| | |||||| ||| ||||| | ||| ||||| || | ||| Sbjct 296714 AGAGCAGGAAACAAATCTCTTGCACGAATTTCTTCTTTACCGTGGTTCTTTCTGATATCA 296655 Query 106877 AGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTT 106932 | || || | |||||| || |||||||| || || || | || | | || ||| Sbjct 296654 ATAAAATCAAAGATATCAGCATGCCATGGTTCCAGGTACAGAGCAAAGGCACCAGGTCTT 296595 Query 106933 TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAAT 106992 | | || | | || | ||||| || || || ||||| || |||| ||| ||||| Sbjct 296594 TTGTTACC-ACCCTGGTCGACATAACGGGCGGTATTATTAAAAACACGAATCATGGGAAT 296536 Query 106993 AATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATG 107052 | || | || ||||||||| || ||| ||| | | | | | | ||| Sbjct 296535 TAACCCGTTAGAAGTACCATTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATG 296476 Query 107053 GATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCC 107112 || || | |||||||| ||||| || || || ||||| || | | ||| | Sbjct 296475 AATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTGTC 296416 Query 107113 ATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGG 107172 || ||||| | ||| ||||||||||| |||||| | ||| ||| |||||| || || Sbjct 296415 GTAAATACCCTCGATAGAGTCCTCCTTCATGGCGACCAAGAAACAAGAGGACATTTGAGG 296356 Query 107173 TCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG-GACA 107231 | |||| ||||||||||| || | ||||| | || ||| | || || || | |||| Sbjct 296355 TTTTGGAGTACCAGCATTAAACAAAGTTGGAGAGGCATGAGTAAAG-TATTTTAGAGACA 296297 Query 107232 TCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACAC 107291 | || ||||| || | ||| || |||||| ||||||||||| | || || | Sbjct 296296 TTAAGTTATATGTTTCTAGAGCAGCTTCGATGTCTCTACCGTGGATGCCCAGTGCGACTC 296237 Query 107292 GCATAAACATGTATTGGGG 107310 ||||| | || ||| || Sbjct 296236 TCATAATTAAGTGTTGTGG 296218 >seq9 Length=439147 Score = 219 bits (242), Expect = 5e-52 Identities = 890/1379 (65%), Gaps = 44/1379 (3%) Strand=Plus/Plus Query 105953 GGTTCAAAGCATTCATTATTACCCAAGA-TTTGTGCGGTGGAGGCTGTTGGCATTGGTGC 106011 |||||||| ||||| |||| |||||||| |||| | || ||||| ||||||||||| || Sbjct 234493 GGTTCAAAACATTCGTTAT-ACCCAAGAATTTGAGAAGTCGAGGCAGTTGGCATTGGCGC 234551 Query 106012 CATCA--AAAGACTGTTACGAAGACCCTTTTCCTTGATG-CGTTCCTTGAGAACATCCCA 106068 ||| ||||| ||| | | || | || ||| | || ||| || | ||||| Sbjct 234552 CATTGTCAAAGA--GTTTCTTAATCCATGTTTGACAATGTCCTTTCTTAAGGTC-TCCCA 234608 Query 106069 GTCGTAGTTGAGCT--TGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGAC 106126 || | | | | ||| || | |||| |||| |||||||| || | || | || Sbjct 234609 ATCCCACAT-ACCAAATGGCTTAGCATTCC-ACATGTCAAATTGTAGAATACCCTTAGAG 234666 Query 106127 GTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCC 106186 | |||||||| || || || ||| ||||| || |||||||||||| || Sbjct 234667 GCTGGAGAACCTTCGAAAGTGGAATACTTACCTTCCTTTTGTGCCAATTCACAGGAGGCT 234726 Query 106187 TCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCT 106246 || || | || ||||| |||||||| || || | |||| | ||||| | Sbjct 234727 TCAAGAGTAGCATGATAGATGGTTTCGAAAATCTGTTTGTTCAAAGTTTGAGCTTCTTTA 234786 Query 106247 GAATCAAATGCGTAGCGGCA-CAAAATAAATACATCCGCGAGACCTTGAACACCCAAACC 106305 || ||||| | |||| ||| || ||| | ||| || ||||||||||||||||| | Sbjct 234787 GATTCAAAGG-GTAGACGCAACATCATATAGGTATCGGCCAGACCTTGAACACCCAAGGC 234845 Query 106306 AATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTC 106365 ||||||||| || |||||| || |||| || ||| |||||| |||| | || Sbjct 234846 AATAGGTCTATGCTTCATATTTGAATTTCTGGCTTCAGGAACTGGATAATAATTACGATC 234905 Query 106366 AATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATC 106425 ||||||| ||| | || | ||||| | || | |||||||| | | || ||| Sbjct 234906 GATGACTCTGTTCAAGTTATGGGTAATGACTTTGGCAATTTCATGTAAACTCTCGAAATT 234965 Query 106426 AAAAGTGCGAGT------CTCTTCA------TTGACATACTTTGGAAGGGCGATTGATGC 106473 | || | ||| |||||| | |||| | ||| || || || || || Sbjct 234966 ATAACTTGCAGTTTTACCATCTTCAGACATCTCGACAAATGCTGGGAGAGCAATAGAGGC 235025 Query 106474 CAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTT 106533 | ||| ||||| || || ||||| | ||||| | ||||| |||||| || Sbjct 235026 TAGATTACAAACGGCAGTTTCATCTGGGGAAGAATACTCGACGATTTCACAACACAAATT 235085 Query 106534 GGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTA 106593 ||| ||||| || ||||| |||| |||||| ||||| | || || | |||||||| Sbjct 235086 GGATGATTTAATGGTACCCAAGTTCTGTTGGTTTGTCTTTCTATTACATGAGTCCTTGTA 235145 Query 106594 GAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTG-AGAATTGCCTTCCACACATCGG 106652 | |||| | || || || || || || |||| |||| | ||||| | ||| | | Sbjct 235146 AACCATGAAAGGTGTACCTGTTTCTGTTTGTG-CTTGTAAGATTGCATACCATAACTTTT 235204 Query 106653 CGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAA 106712 ||| | ||||| || | || || ||| ||||| || || || |||||| Sbjct 235205 GGGC---TTTAATGGTTTTACCACGACCTTCCCTTTCGTAACGGGTATATAGCTCTTCAA 235261 Query 106713 ACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATT 106772 | || |||||| | || | |||||| || ||| | || | || ||| Sbjct 235262 ATTCATCACCCCAGACATCATCTAAACCTGGGGCAGCACTGGGAGAAAATAAAGTCCAGG 235321 Query 106773 GACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGAT 106832 | ||| |||| | ||| || ||||| |||||||| ||||||||||| | | || | || Sbjct 235322 GCCCATCCTCTTGAACACGTTTCATAAAAAGGTCAGGAATCCACAGAGCAGGGAACAAAT 235381 Query 106833 CTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATA 106891 | | | ||| || ||||| | ||| ||| | || | || | || || | |||| Sbjct 235382 CCCTTGCACGGA-TTTCTTCTTTACCATGGGTTTTTCTAATATCGACAAAGTCGAAGATA 235440 Query 106892 TCCGCGTGCCATGGCT-CAAGATA-----GACTGCGATAGATCCCTTTCGACGCCCAGCT 106945 || || |||||||| | ||||| | | || || || ||| | || || Sbjct 235441 TCTGCATGCCATGGTTCCAAGAAAAGCGCAAAGGCACCAGGTCTCTTGTTA---CCTCCT 235497 Query 106946 TGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGAT 107005 || | ||||| || || || ||| || || |||| ||| ||||| | |||| || Sbjct 235498 TGGTCCACATAACGAGCAGTATTGTTGAAAACACGAATCATAGGAATCAACCCATTCGAA 235557 Query 107006 TGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCA 107065 ||| || || || ||| ||| ||| | | | | || || | ||| Sbjct 235558 GTACCGTTAGTACCGGCGATATAAGAACCTGTGGAACGGATGTTGTTAATATGAAGACCA 235617 Query 107066 ATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTG 107125 | ||| || || ||| || || ||||| || | | ||| |||| || || | Sbjct 235618 ACACCACCTGCAGTCTTAGAAATCATAGCACATTCTTTCAAAGTATCATAAATGCCTTCA 235677 Query 107126 ATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCA 107185 || ||||| ||||| |||| || ||||| || ||||| || || ||| |||||| Sbjct 235678 ATAGAGTCATCCTTCATGGCAATTAGGAAACATGAAGACATTTGGGGATGTGGAGTACCA 235737 Query 107186 GCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT-GGGACATCTTGTCGTATGT 107244 || ||||| | |||||| | |||||| |||| ||| ||| |||||| | ||| || Sbjct 235738 GCGTTGAATAAGGTTGGGGAAGCGTGAGTGAA-ATATCTTAACGACATCAAATTGTAGGT 235796 Query 107245 CTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGT 107303 || || ||||| || || || |||||||| || | ||||||||||||| || || Sbjct 235797 CTTCAGCACAGACTCGATATCACTACCGTGGATACCCAGCGCCACACGCATAACCAAGT 235855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980674629080