Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03-
21] 17 sequences; 11,929,789 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq5 107 2e-18
>seq5
Length=1007496
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 153205 TTATAGGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTTG 153264
|||| ||| | || || || || || ||| ||| ||||| || || ||||| | | |
Sbjct 708991 TTATCGGTAAGGGTTATTACGGTACGATTTTACCACCAGTTATTCAAAGAAACCTGTTGG 709050
Query 153265 AGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGAT 153324
| | |||| ||||| || ||||| ||||||||||| |||| ||||| || || ||
Sbjct 709051 AAAGTCCTGAATGGTATACTTCTTATACTCCCTATCAGCCTGAAATATCACAAGGTAGGC 709110
Query 153325 TGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCAA 153384
| ||||| |||| |||| ||||| || | |||| | || || || || | || |
Sbjct 709111 TTGAAGCGCTATTGAATTTTCAAACAGTCGTTTCAGATTTGACCGGTTTGCCTGTGGCCA 709170
Query 153385 ACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATGCTATT 153433
|||| || | || ||||||| |||||||| | || || ||||||||
Sbjct 709171 ACGCCTCATTGTTGGATGAAGGTACTGCAGCTGGTGAGGCTATGCTATT 709219
Score = 107 bits (118), Expect = 2e-18
Identities = 323/492 (66%), Gaps = 20/492 (4%)
Strand=Plus/Plus
Query 154602 ATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCA 154661
|| ||||| || ||| ||| || ||||||||||| |||| |||| ||||| || |
Sbjct 710439 ATTACAGGTTTCGATGGTATTTCTTTACAACCTAATTCAGGTGCACAAGGTGAATACACC 710498
Query 154662 GGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGTATGT 154721
|| || || |||| | | ||| || | || || | | | || ||||||
Sbjct 710499 GGTTTGAGAGTAATCAGATCTTACTTGGAAAGCAAGGGTGAAAGTCACCGTAACGTATGT 710558
Query 154722 TTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGGATGAAA 154781
|| || || | || || ||||| || ||||| ||| ||||| |||||| || |||||
Sbjct 710559 TTAATCCCCGTTTCTGCTCATGGCACAAATCCAGCTTCTGCTGCCATGGCGGGTTTGAAA 710618
Query 154782 GTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGACATCAAAGATCTAGA-GA---A 154837
||||| |||||| ||| | |||||| | | | ||||| | || |
Sbjct 710619 GTTGTTCCTGTCAACTGTTTACAGGATGGTT-CTTTG--------GATCTGGTTGACTTA 710669
Query 154838 GAAAGCAATCATGAATA-CATTT----GAACTGTCATGTATTATGATTACATACCCATCT 154892
||| ||| |||| | |||| ||||| | | ||||| || || || |||
Sbjct 710670 AAAACCAAGGCTGAAAAGCATTCTAAAGAACTAGCTGCCGTAATGATCACCTATCCTTCT 710729
Query 154893 ACACATGGTGTATTTGAAACTAACATTAGACA-GATATGTAAGATCGTTCATGACAATGG 154951
|| ||||| |||||||| | ||| ||| | ||| | | ||||| ||| | |||
Sbjct 710730 ACTTATGGTTTATTTGAACCAGGCATCCAACATGCTAT-TGATATCGTGCATTATTTTGG 710788
Query 154952 TGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATG 155011
||| || |||||| | ||||| || ||| | || || ||||| || || | |||| |
Sbjct 710789 TGGGCAAGTATATTTGGATGGTGCTAATATGAACGCGCAGGTTGGGTTAACTTCACCAGG 710848
Query 155012 TGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGG 155071
|| |||||||||||| || || | || || || || ||||| | || || |||||
Sbjct 710849 AGATCTTGGTGCAGATGTCTGCCACTTGAATTTGCACAAGACATTTTCCATCCCTCATGG 710908
Query 155072 AGGTGGAGGTCC 155083
|| || |||||
Sbjct 710909 TGGCGGTGGTCC 710920
Score = 98.7 bits (108), Expect = 1e-15
Identities = 153/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 153768 CAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 153827
||| | |||||| | || ||||| ||||| |||||||||||||| || ||||| |
Sbjct 709575 CAACGATTTGGTGTCCCAATGGGTTATGGTGGTCCTCATGCTGCCTTTTTTGCTGTCATT 709634
Query 153828 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGTGAAGGT 153887
|| |||| || ||||| || || ||||||||||| || ||| ||| | |||
Sbjct 709635 GATAAGTTAAATAGAAAAATTCCAGGCAGAATTGTCGGCGTGTCTAAAGACCGCTTAGGG 709694
Query 153888 AATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCA 153947
|| | || | | || || || || ||||||||||| || |||| | | || || |||
Sbjct 709695 AAAACGGCCTTGCGTTTGGCCCTCCAAACTAGAGAGCAACACATCAAGCGTGATAAGGCA 709754
Query 153948 ACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAAT 153986
|| || || || || ||||| || || ||||||||
Sbjct 709755 ACTTCAAATATTTGTACCGCTCAAGCTCTATTGGCTAAT 709793
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579212676917280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |