Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03- 21] 17 sequences; 11,929,789 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq5 113 5e-20 >seq5 Length=1007496 Score = 113 bits (124), Expect = 5e-20 Identities = 324/492 (66%), Gaps = 20/492 (4%) Strand=Plus/Plus Query 159277 ATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCA 159336 || ||||| || ||| ||| || ||||||||||| |||| |||| ||||| || | Sbjct 710439 ATTACAGGTTTCGATGGTATTTCTTTACAACCTAATTCAGGTGCACAAGGTGAATACACC 710498 Query 159337 GGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGTATGT 159396 || || || |||| | | ||| || | || || | | | || |||||| Sbjct 710499 GGTTTGAGAGTAATCAGATCTTACTTGGAAAGCAAGGGTGAAAGTCACCGTAACGTATGT 710558 Query 159397 TTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAA 159456 || || || | || || ||||| || ||||| || || || | ||||| || ||||| Sbjct 710559 TTAATCCCCGTTTCTGCTCATGGCACAAATCCAGCTTCTGCTGCCATGGCGGGTTTGAAA 710618 Query 159457 GTTGTAGGTGTCAAGTGTGATGATGATGGCAACATAGACATCAAAGATCTAGA-GA---A 159512 ||||| |||||| ||| | ||||| | | | ||||| | || | Sbjct 710619 GTTGTTCCTGTCAACTGTTTACAGGATGGTT-CTTTG--------GATCTGGTTGACTTA 710669 Query 159513 GAAAGCAATCATGAATA-CATTT----GAACTGTCATGTATTATGATTACATATCCATCT 159567 ||| ||| |||| | |||| ||||| | | ||||| || ||||| ||| Sbjct 710670 AAAACCAAGGCTGAAAAGCATTCTAAAGAACTAGCTGCCGTAATGATCACCTATCCTTCT 710729 Query 159568 ACACATGGTGTATTTGAAACAAACATCAGACA-GATATGTAAGATTGTTCATGAGAATGG 159626 || ||||| |||||||| || |||| ||| | ||| | | || || ||| | ||| Sbjct 710730 ACTTATGGTTTATTTGAACCAGGCATCCAACATGCTAT-TGATATCGTGCATTATTTTGG 710788 Query 159627 TGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATG 159686 ||| || |||||| | |||||||| ||| | || || ||||| || || | |||| | Sbjct 710789 TGGGCAAGTATATTTGGATGGTGCTAATATGAACGCGCAGGTTGGGTTAACTTCACCAGG 710848 Query 159687 TGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGG 159746 || |||||||||||| || || | || || || |||||||| | || || ||||| Sbjct 710849 AGATCTTGGTGCAGATGTCTGCCACTTGAATTTGCACAAGACATTTTCCATCCCTCATGG 710908 Query 159747 AGGTGGAGGTCC 159758 || || ||||| Sbjct 710909 TGGCGGTGGTCC 710920 Score = 93.3 bits (102), Expect = 5e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 157880 TTATAGGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTTCTTG 157939 |||| ||| | || || || || || || ||| ||||| || || ||||| | | | Sbjct 708991 TTATCGGTAAGGGTTATTACGGTACGATTTTACCACCAGTTATTCAAAGAAACCTGTTGG 709050 Query 157940 AGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGAT 157999 | | |||| ||||| || ||||| ||||||||||| |||| ||||| || || || Sbjct 709051 AAAGTCCTGAATGGTATACTTCTTATACTCCCTATCAGCCTGAAATATCACAAGGTAGGC 709110 Query 158000 TGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCGATAGCAA 158059 | ||||| |||| |||| ||||| || | |||| | || || | || | || | Sbjct 709111 TTGAAGCGCTATTGAATTTTCAAACAGTCGTTTCAGATTTGACCGGTTTGCCTGTGGCCA 709170 Query 158060 ACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATGCTGTT 158108 |||| || | || ||||||| |||||||| | || || ||||| || Sbjct 709171 ACGCCTCATTGTTGGATGAAGGTACTGCAGCTGGTGAGGCTATGCTATT 709219 Score = 93.3 bits (102), Expect = 5e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 158502 ||| | |||||| | || ||||| || || |||||||||||||| || ||||| | Sbjct 709575 CAACGATTTGGTGTCCCAATGGGTTATGGTGGTCCTCATGCTGCCTTTTTTGCTGTCATT 709634 Query 158503 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGT 158562 || |||| || ||||| || || ||||||||||| || ||| ||| || ||| Sbjct 709635 GATAAGTTAAATAGAAAAATTCCAGGCAGAATTGTCGGCGTGTCTAAAGACCGCTTAGGG 709694 Query 158563 AATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCA 158622 || | || | | || || || || ||||||||||| || |||| | || || ||| Sbjct 709695 AAAACGGCCTTGCGTTTGGCCCTCCAAACTAGAGAGCAACACATCAAGCGTGATAAGGCA 709754 Query 158623 ACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAAT 158661 || || || || || || ||||| || |||||||| Sbjct 709755 ACTTCAAATATTTGTACCGCTCAAGCTCTATTGGCTAAT 709793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588051075039120