Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03- 21] 17 sequences; 11,929,789 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq5 118 1e-21 seq12 82.4 9e-11 >seq5 Length=1007496 Score = 118 bits (130), Expect = 1e-21 Identities = 162/220 (74%), Gaps = 11/220 (5%) Strand=Plus/Minus Query 150979 CCAGAAATTCTTGATGGAAGAGTAAAGACTTTACATCCAAAGATTCATGGTGGTATTCTT 151038 |||||||| | | || ||||| ||||||||||||||| ||||||||||||||||| Sbjct 579046 CCAGAAATGTTGGGAGGTAGAGTGAAGACTTTACATCCAGCCGTTCATGGTGGTATTCTT 578987 Query 151039 GCACAACGAGGTAATTCTAGTCATGATTTAGATCTTAAGGTAAATCGTATTGAAC----C 151094 || || ||| || |||| |||| |||| | |||| | | | |||||| | Sbjct 578986 GC-CA--GAGATATCGATAGTGATGAGAAAGATTTGAAGGAACAACACATTGAAAAAGTC 578930 Query 151095 GATTGATATTGTTGCTGTAAACCTATATCCATTTAAAGAAACTGTTGCTAAACCAGGTGT 151154 |||| | | ||| ||||| | | ||||||||||||||||||||| | || |||||| Sbjct 578929 GATT-ACGTCGTT--TGTAA-CTTGTATCCATTTAAAGAAACTGTTTCCAAGGTAGGTGT 578874 Query 151155 AACTCTTGCAGAAGCAATTGAGAATATTGACATTGGTGGT 151194 ||| || ||||||| | || | ||||||||||||||| Sbjct 578873 AACCATTTCAGAAGCTGTAGAAGAAATTGACATTGGTGGT 578834 >seq12 Length=1041178 Score = 82.4 bits (90), Expect = 9e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 151114 AACCTATATCCATTTAAAGAAACTGTTGCTAAACCAGGTGTAACTCTTGCAGAAGCAATT 151173 |||||||||||||| ||||||||||| |||||| ||||| || || |||||| | Sbjct 210248 AACCTATATCCATTCAAAGAAACTGTGGCTAAAATTGGTGTTACAGTTCAAGAAGCCGTG 210189 Query 151174 GAGAATATTGACATTGGTGGTCCTAGTATGGTAAGATCAGCAGCAAAGAA 151223 ||| | ||||| ||||||||| | | | ||||| | || |||||||| Sbjct 210188 GAGGAAATTGATATTGGTGGTGTGACTTTATTAAGAGCTGCTGCAAAGAA 210139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582847876144800