Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03- 21] 17 sequences; 11,929,789 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq5 145 4e-30 seq9 105 3e-18 >seq5 Length=1007496 Score = 145 bits (160), Expect = 4e-30 Identities = 316/473 (67%), Gaps = 0/473 (0%) Strand=Plus/Minus Query 25890 TTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAA 25949 ||||| |||| ||| |||| |||||| || || | ||| || | ||| |||| Sbjct 296779 TTGGAGAGAACAAAGTCCAAGTCCCATTTTCTTCGACACGTTTCATGAAAAGATCAGGAA 296720 Query 25950 TCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTA 26009 |||||| ||| ||| |||||||| || | ||||||||||| ||||| |||||| | | Sbjct 296719 TCCACAGAGCAGGAAACAAATCTCTTGCACGAATTTCTTCTTTACCGTGGTTCTTTCTGA 296660 Query 26010 GATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTT 26069 ||| | |||||||| ||||| | ||||||||||| | || | |||||| ||| Sbjct 296659 TATCAATAAAATCAAAGATATCAGCATGCCATGGTTCCAGGTACAGAGCAAAGGCACCAG 296600 Query 26070 TTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTG 26129 |||||| ||||| || || || || | || || | ||| ||||| | ||| | Sbjct 296599 GTCTTTTGTTACCACCCTGGTCGACATAACGGGCGGTATTATTAAAAACACGAATCATGG 296540 Query 26130 GAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATAT 26189 ||| ||| || | ||| || ||||| | | ||| | || || || || | ||| | Sbjct 296539 GAATTAACCCGTTAGAAGTACCATTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGT 296480 Query 26190 CGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTG 26249 ||| ||| | ||| || |||||||| ||| ||||| ||||| ||| | | Sbjct 296479 TATGAATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAG 296420 Query 26250 TATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATT 26309 | ||| |||| || | || || | ||||| | | || |||||||| || | || Sbjct 296419 TGTCGTAAATACCCTCGATAGAGTCCTCCTTCATGGCGACCAAGAAACAAGAGGACATTT 296360 Query 26310 GCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATAT 26362 | | | | || || | |||||| || || || | ||||||||| | ||| Sbjct 296359 GAGGTTTTGGAGTACCAGCATTAAACAAAGTTGGAGAGGCATGAGTAAAGTAT 296307 >seq9 Length=439147 Score = 105 bits (116), Expect = 3e-18 Identities = 282/431 (65%), Gaps = 0/431 (0%) Strand=Plus/Plus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 |||||| | || |||||||||| ||| || ||||| || || | ||||||||||| Sbjct 235344 CATAAAAAGGTCAGGAATCCACAGAGCAGGGAACAAATCCCTTGCACGGATTTCTTCTTT 235403 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 || || | ||| | | ||| | || || || ||||||| ||||||||||| || | Sbjct 235404 ACCATGGGTTTTTCTAATATCGACAAAGTCGAAGATATCTGCATGCCATGGTTCCAAGAA 235463 Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112 | ||||| ||| ||| || || ||||| || || || | ||||| | || Sbjct 235464 AAGCGCAAAGGCACCAGGTCTCTTGTTACCTCCTTGGTCCACATAACGAGCAGTATTGTT 235523 Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGA 26172 |||||| | ||| |||| || ||| | ||| ||||| || | || | || Sbjct 235524 GAAAACACGAATCATAGGAATCAACCCATTCGAAGTACCGTTAGTACCGGCGATATAAGA 235583 Query 26173 TCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGC 26232 ||||| || | || | || | ||||| ||| | ||||| || || ||||| Sbjct 235584 ACCTGTGGAACGGATGTTGTTAATATGAAGACCAACACCACCTGCAGTCTTAGAAATCAT 235643 Query 26233 TGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAA 26292 ||||| ||| | ||||| |||| |||| || ||| | ||||| | | || Sbjct 235644 AGCACATTCTTTCAAAGTATCATAAATGCCTTCAATAGAGTCATCCTTCATGGCAATTAG 235703 Query 26293 AAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATG 26352 ||||| ||||| | ||| | ||| | || || | || ||||| || || | ||| || Sbjct 235704 GAAACATGAAGACATTTGGGGATGTGGAGTACCAGCGTTGAATAAGGTTGGGGAAGCGTG 235763 Query 26353 AGTATAATATC 26363 ||| |||||| Sbjct 235764 AGTGAAATATC 235774 Score = 95.1 bits (104), Expect = 6e-15 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 25048 GTTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGT 25107 ||||||||| | ||||||||||||||| |||| || | ||||||||||| || || || Sbjct 234480 GTTTGAAGTCACTGGTTCAAAACATTCGTTATACCCAAGAATTTGAGAAGTCGAGGCAGT 234539 Query 25108 TGGCATTAATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTTTAA 25167 ||||||| || ||| | || ||||| || |||| ||| ||||| || | | |||| Sbjct 234540 TGGCATTGGCGCCATTGTCAAAGAGTTTCTTAATCCATGTTTGACAATGTCCTTTCTTAA 234599 Query 25168 TTTATCCCAATC 25179 | |||||||| Sbjct 234600 GGTCTCCCAATC 234611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039947573275