Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03-
21] 17 sequences; 11,929,789 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq5 145 4e-30
seq9 105 3e-18
>seq5
Length=1007496
Score = 145 bits (160), Expect = 4e-30
Identities = 316/473 (67%), Gaps = 0/473 (0%)
Strand=Plus/Minus
Query 25890 TTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAA 25949
||||| |||| ||| |||| |||||| || || | ||| || | ||| ||||
Sbjct 296779 TTGGAGAGAACAAAGTCCAAGTCCCATTTTCTTCGACACGTTTCATGAAAAGATCAGGAA 296720
Query 25950 TCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTA 26009
|||||| ||| ||| |||||||| || | ||||||||||| ||||| |||||| | |
Sbjct 296719 TCCACAGAGCAGGAAACAAATCTCTTGCACGAATTTCTTCTTTACCGTGGTTCTTTCTGA 296660
Query 26010 GATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTT 26069
||| | |||||||| ||||| | ||||||||||| | || | |||||| |||
Sbjct 296659 TATCAATAAAATCAAAGATATCAGCATGCCATGGTTCCAGGTACAGAGCAAAGGCACCAG 296600
Query 26070 TTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTG 26129
|||||| ||||| || || || || | || || | ||| ||||| | ||| |
Sbjct 296599 GTCTTTTGTTACCACCCTGGTCGACATAACGGGCGGTATTATTAAAAACACGAATCATGG 296540
Query 26130 GAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATAT 26189
||| ||| || | ||| || ||||| | | ||| | || || || || | ||| |
Sbjct 296539 GAATTAACCCGTTAGAAGTACCATTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGT 296480
Query 26190 CGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTG 26249
||| ||| | ||| || |||||||| ||| ||||| ||||| ||| | |
Sbjct 296479 TATGAATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAG 296420
Query 26250 TATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATT 26309
| ||| |||| || | || || | ||||| | | || |||||||| || | ||
Sbjct 296419 TGTCGTAAATACCCTCGATAGAGTCCTCCTTCATGGCGACCAAGAAACAAGAGGACATTT 296360
Query 26310 GCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATAT 26362
| | | | || || | |||||| || || || | ||||||||| | |||
Sbjct 296359 GAGGTTTTGGAGTACCAGCATTAAACAAAGTTGGAGAGGCATGAGTAAAGTAT 296307
>seq9
Length=439147
Score = 105 bits (116), Expect = 3e-18
Identities = 282/431 (65%), Gaps = 0/431 (0%)
Strand=Plus/Plus
Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992
|||||| | || |||||||||| ||| || ||||| || || | |||||||||||
Sbjct 235344 CATAAAAAGGTCAGGAATCCACAGAGCAGGGAACAAATCCCTTGCACGGATTTCTTCTTT 235403
Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052
|| || | ||| | | ||| | || || || ||||||| ||||||||||| || |
Sbjct 235404 ACCATGGGTTTTTCTAATATCGACAAAGTCGAAGATATCTGCATGCCATGGTTCCAAGAA 235463
Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112
| ||||| ||| ||| || || ||||| || || || | ||||| | ||
Sbjct 235464 AAGCGCAAAGGCACCAGGTCTCTTGTTACCTCCTTGGTCCACATAACGAGCAGTATTGTT 235523
Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGA 26172
|||||| | ||| |||| || ||| | ||| ||||| || | || | ||
Sbjct 235524 GAAAACACGAATCATAGGAATCAACCCATTCGAAGTACCGTTAGTACCGGCGATATAAGA 235583
Query 26173 TCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGC 26232
||||| || | || | || | ||||| ||| | ||||| || || |||||
Sbjct 235584 ACCTGTGGAACGGATGTTGTTAATATGAAGACCAACACCACCTGCAGTCTTAGAAATCAT 235643
Query 26233 TGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAA 26292
||||| ||| | ||||| |||| |||| || ||| | ||||| | | ||
Sbjct 235644 AGCACATTCTTTCAAAGTATCATAAATGCCTTCAATAGAGTCATCCTTCATGGCAATTAG 235703
Query 26293 AAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATG 26352
||||| ||||| | ||| | ||| | || || | || ||||| || || | ||| ||
Sbjct 235704 GAAACATGAAGACATTTGGGGATGTGGAGTACCAGCGTTGAATAAGGTTGGGGAAGCGTG 235763
Query 26353 AGTATAATATC 26363
||| ||||||
Sbjct 235764 AGTGAAATATC 235774
Score = 95.1 bits (104), Expect = 6e-15
Identities = 100/132 (76%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 25048 GTTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGT 25107
||||||||| | ||||||||||||||| |||| || | ||||||||||| || || ||
Sbjct 234480 GTTTGAAGTCACTGGTTCAAAACATTCGTTATACCCAAGAATTTGAGAAGTCGAGGCAGT 234539
Query 25108 TGGCATTAATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTTTAA 25167
||||||| || ||| | || ||||| || |||| ||| ||||| || | | ||||
Sbjct 234540 TGGCATTGGCGCCATTGTCAAAGAGTTTCTTAATCCATGTTTGACAATGTCCTTTCTTAA 234599
Query 25168 TTTATCCCAATC 25179
| ||||||||
Sbjct 234600 GGTCTCCCAATC 234611
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039947573275
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |