Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03-
21] 17 sequences; 11,929,789 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq5 123 3e-23
>seq5
Length=1007496
Score = 123 bits (136), Expect = 3e-23
Identities = 329/494 (67%), Gaps = 24/494 (5%)
Strand=Plus/Minus
Query 138204 GGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCT 138263
||||| || || ||||| || || | |||||||| || ||||| | || || ||||||
Sbjct 710920 GGACCACCGCCACCATGAGGGATGGAAAATGTCTTGTGCAAATTCAAGTGGCAGACATCT 710861
Query 138264 GCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGA 138323
|||||| || | |||| | || || ||||| || || | ||| |||||||| | |
Sbjct 710860 GCACCAAGATCTCCTGGTGAAGTTAACCCAACCTGCGCGTTCATATTAGCACCATCCAAA 710801
Query 138324 TATACCTGACCACCATTGTCATGAACGATCTTACATATC-TGTCTGATGTTTGTTTCAAA 138382
||||| || |||||| | ||| ||||| | | ||| | ||| |||| || ||||||
Sbjct 710800 TATACTTGCCCACCAAAATAATGCACGATATCA-ATAGCATGTTGGATGCCTGGTTCAAA 710742
Query 138383 TACACCATGAGTCGATGGATATGTAATCATAATACATGAG--AGTTC----AAATG-TAT 138435
|| ||||| ||| || ||||| || ||||| ||| || ||||| |||| | |
Sbjct 710741 TAAACCATAAGTAGAAGGATAGGTGATCAT--TACGGCAGCTAGTTCTTTAGAATGCTTT 710684
Query 138436 TCATGATTGCTTTCT---TC-TCTAGATCTTTGATGTCTATGTTGCCATCATCATCACAC 138491
||| ||| ||| | || | ||||| | | | ||||| | |||
Sbjct 710683 TCAGCCTTGGTTTTTAAGTCAACCAGATC--------CAAAG-AACCATCCTGTAAACAG 710633
Query 138492 TTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTAGTTCCATGTGCT 138551
|||||| |||||||||| || |||||| | ||| ||| ||||| || ||||| ||
Sbjct 710632 TTGACAGGAACAACTTTCAAACCCGCCATGGCAGCAGAAGCTGGATTTGTGCCATGAGCA 710573
Query 138552 GACTCTGGTATCAGACATACATTTCTTTTATCATCTCCTGATCCTTGATGATATGCTTGG 138611
|| | || || | |||||| || | | | || || | || || | | |
Sbjct 710572 GAAACGGGGATTAAACATACGTTACGGTGACTTTCACCCTTGCTTTCCAAGTAAGATCTG 710513
Query 138612 ATTGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTAGGTTGTAATGATATAGAA 138671
||| || || || | || ||||| |||| |||| ||||||||||| || ||| |
Sbjct 710512 ATTACTCTCAAACCGGTGTATTCACCTTGTGCACCTGAATTAGGTTGTAAAGAAATACCA 710453
Query 138672 TCAAAACCTGTGAT 138685
|| |||||||| ||
Sbjct 710452 TCGAAACCTGTAAT 710439
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 139854 AACAGCATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGT 139913
|| ||||| ||||| | |||||||| ||||||| || | || ||||| || | ||
Sbjct 709219 AATAGCATAGCCTCACCAGCTGCAGTACCTTCATCCAACAATGAGGCGTTGGCCACAGGC 709160
Query 139914 AATCCTGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGA 139973
|| || || | |||| | || ||||| |||| |||| ||||| | || || ||
Sbjct 709159 AAACCGGTCAAATCTGAAACGACTGTTTGAAAATTCAATAGCGCTTCAAGCCTACCTTGT 709100
Query 139974 GATATCTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTT 140033
||||| |||| ||||||||||| ||||| || ||||| |||| | || | | ||||
Sbjct 709099 GATATTTCAGGCTGATAGGGAGTATAAGAAGTATACCATTCAGGACTTTCCAACAGGTTT 709040
Query 140034 CGCTGTATGACTGGGGGTGTAATGGTTCCATAGTATCCTTGACCTATAA 140082
| || || ||||| ||| ||| || || || || || | ||| ||||
Sbjct 709039 CTTTGAATAACTGGTGGTAAAATCGTACCGTAATAACCCTTACCGATAA 708991
Score = 84.2 bits (92), Expect = 3e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 139311 AGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTA 139370
|| ||||| || || || || || ||||| || || | | || || |||||||||
Sbjct 709783 AGAGCTTGAGCGGTACAAATATTTGAAGTTGCCTTATCACGCTTGATGTGTTGCTCTCTA 709724
Query 139371 GTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATT 139430
||||| || || || | | || | || ||| || ||| ||| || ||||||
Sbjct 709723 GTTTGGAGGGCCAAACGCAAGGCCGTTTTCCCTAAGCGGTCTTTAGACACGCCGACAATT 709664
Query 139431 CTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCT 139490
||||| || || ||||| || |||| || | ||||| || ||||||||||||||
Sbjct 709663 CTGCCTGGAATTTTTCTATTTAACTTATCAATGACAGCAAAAAAGGCAGCATGAGGACCA 709604
Query 139491 CCGTATCCCATAGGAATACCAAACCTTTG 139519
|| || ||||| || | |||||| | |||
Sbjct 709603 CCATAACCCATTGGGACACCAAATCGTTG 709575
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578998276962840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |