Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03- 21] 17 sequences; 11,929,789 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq5 347 1e-90 seq9 217 2e-51 >seq5 Length=1007496 Score = 347 bits (384), Expect = 1e-90 Identities = 916/1385 (66%), Gaps = 34/1385 (2%) Strand=Plus/Plus Query 75227 ATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGAC 75286 ||| | |||||| | ||||||||||| |||||| || ||| | || ||||| || Sbjct 296233 ATGAGAGTCGCACTGGGCATCCACGGTAGAGACATCGAAGCTGCTCTAGAAACATATAAC 296292 Query 75287 AAGATGTC-CCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACC 75345 ||||| | || || || | ||| || | ||||| | || ||||||||||| || Sbjct 296293 TTAATGTCTCTAAAATA-CTTTACTCATGCCTCTCCAACTTTGTTTAATGCTGGTACTCC 296351 Query 75346 AAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTAT 75405 || ||| || |||||| ||| ||| | |||||| ||||||||||| ||| | ||||| Sbjct 296352 AAAACCTCAAATGTCCTCTTGTTTCTTGGTCGCCATGAAGGAGGACTCTATCGAGGGTAT 296411 Query 75406 CTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCA 75465 || | ||| | | || ||||| || || || ||||| |||||||| | || Sbjct 296412 TTACGACACTTTGAAAGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACA 296471 Query 75466 CATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGG 75525 || ||| | | | | | | ||| ||| || ||||||||| || | || Sbjct 296472 TATTCATAACATTCGTTCAACTGGTTCTTACATTGCTGGTACAAATGGTACTTCTAACGG 296531 Query 75526 TATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCG 75585 | ||||| ||| |||| || ||||| || || || ||||| | | || | || Sbjct 296532 GTTAATTCCCATGATTCGTGTTTTTAATAATACCGCCCGTTATGTCGA-CCAGGGTGGTA 296590 Query 75586 TCGCAAG----GGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGT 75641 | ||| || || | || | ||| |||||||||||||||| |||||| | || | Sbjct 296591 ACAAAAGACCTGGTGCCTTTGCTCTGTACCTGGAACCATGGCATGCTGATATCTTTGATT 296650 Query 75642 TCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCAT 75701 | |||| | || ||||| ||| | ||||| ||| |||||| | ||| | Sbjct 296651 TTATTGATATCAGAAAGAACCACGGTAAAGAAGAAATTCGTGCAAGAGATTTGTTTCCTG 296710 Query 75702 CCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTT 75761 | ||||||||||| || ||||||||||| || || || || ||| ||| || | | Sbjct 296711 CTCTGTGGATTCCTGATCTTTTCATGAAACGTGTCGAAGAAAATGGGACTTGGACTTTGT 296770 Query 75762 TCTGTCCAGACA-AGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTC 75820 ||| |||| ||| || || ||||| |||| ||||| || |||||||| || Sbjct 296771 TCTCTCCA-ACAGCAGCTCCCGGTCTAAGCGACTGTTACGGTGACGATTTTGAAGCTCTA 296829 Query 75821 TACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTTTGG 75880 || || || ||| | || ||| | | || ||| | ||| | | ||| Sbjct 296830 TATACCCGCTACGAAAAAGAAGGTCGTGGTAA---GACCATTAAAGCTCAAAAATTATGG 296886 Query 75881 AAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCT 75940 | | ||| | || |||| || || ||||| ||||| | | || |||| ||||||||| Sbjct 296887 TATTCCATTTTGGAAGCACAAACTGAAACTGGTACACCTTTTGTGGTTTATAAGGATGCT 296946 Query 75941 TGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACG 76000 || |||| ||| ||||||||| || ||||| |||||| || || | ||| Sbjct 296947 TGCAACAGAAAGTCTAACCAAAAAAACTTGGGTGTTATCAAGTCATCGAACTTATGCTGT 297006 Query 76001 GAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCC 76060 |||||| | |||||| ||| | ||| || || |||||||| || ||||| || | ||| Sbjct 297007 GAAATTGTTGAGTACTCAGCTCCGGACGAAACTGCTGTTTGTAACTTGGCTTCCGTTGCC 297066 Query 76061 CTTCCAAAGTATGTCAATGA------AGA-GAC--TCGCACTTTTGATTA-----TGAAA 76106 | ||| || ||| ||| ||| ||| | |||| | ||| | ||| Sbjct 297067 TTGCCAGCGT---TCATTGAAACGTCAGAGGACGGCCAAACTTCTACTTACAACTTCAAA 297123 Query 76107 AACTT-CATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAAT 76165 || || || ||||| | || ||||||| ||| ||||| |||| ||||| | ||| Sbjct 297124 AAATTACACGAAATTGCCAAAGTTGTTACTCGTAATTTAAACAGAGTTATTGATCGTAAT 297183 Query 76166 TTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGT 76225 | || ||| |||| ||| ||| || |||||| |||| || || |||| |||||| Sbjct 297184 TACTACCCCATTGAAGAAGCGAGAAGATCCAATATGAGACATAGGCCAATTGCCTTGGGT 297243 Query 76226 GTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCC 76285 ||||||||| | || || ||||| ||| || | | |||||||| || || ||| Sbjct 297244 GTTCAAGGTTTGGCTGACACTTTTATGTTGCTACGTTTACCCTTTGATTCTGAAGAGGCC 297303 Query 76286 AAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGT 76345 | ||| | ||||||||||| || ||||| || ||| |||| || |||| Sbjct 297304 CGTTTACTAAATATCCAAATCTTTGAAACAATTTATCATGCCTCCATGGAAGCTTCTTGT 297363 Query 76346 GAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGG 76405 ||||| ||| || | || | || || || || | |||||||| || || ||||| Sbjct 297364 GAATTAGCTCAAAAGGACGGCCCATACGAAACCTTCCAAGGTTCTCCAGCTTCTCAAGGT 297423 Query 76406 GTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTACGACTGGGATGTTCTC 76465 | |||||||| ||||||||||| || || | || | || ||||| | | Sbjct 297424 ATACTTCAGTTCGATATGTGGGACCAAAAACCCTACGGCATGTGGGATTGGGACACTTTG 297483 Query 76466 AAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCAATGCCAA 76523 | | || ||| | | | ||| || | ||| ||||| |||||||||||||| | Sbjct 297484 AGGAAAGATGTCATGAAACATGGTATTAGAAAC--TCTTTGACCATGGCACCAATGCCTA 297541 Query 76524 CAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACA 76583 | || ||||| | ||||| |||||| |||||||||| ||||||||| ||| | |||| Sbjct 297542 CTGCATCCACATCCCAAATATTGGGTTATAATGAATGTTTTGAACCAGTCACCTCTAACA 297601 Query 76584 TCTAC 76588 | ||| Sbjct 297602 TGTAC 297606 >seq9 Length=439147 Score = 217 bits (240), Expect = 2e-51 Identities = 909/1408 (65%), Gaps = 50/1408 (4%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 |||||| || || | ||||| || || | || |||||||| || || || ||||| Sbjct 235862 CCACAGCACTTGGTTATGCGTGTGGCGCTGGGTATCCACGGTAGTGATATCGAGTCTGTG 235803 Query 75272 TTGGAGACATACGACAAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 || |||| ||| | |||||| ||| ||| |||| |||||| | |||||| | || Sbjct 235802 CTGAAGACCTACAATTTGATGTCGTTAAGATAT-TTCACTCACGCTTCCCCAACCTTATT 235744 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| |||||||| ||| || || ||||| || ||||| || |||| ||||| || Sbjct 235743 CAACGCTGGTACTCCACATCCCCAAATGTCTTCATGTTTCCTAATTGCCATGAAGGATGA 235684 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 ||| || | || || |||| ||| | | || ||||| || || ||| || || Sbjct 235683 CTCTATTGAAGGCATTTATGATACTTTGAAAGAATGTGCTATGATTTCTAAGACTGCAGG 235624 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510 ||| |||| | || || | | | | ||| ||| ||| || || || Sbjct 235623 TGGTGTTGGTCTTCATATTAACAACATCCGTTCCACAGGTTCTTATATCGCCGGTACTAA 235564 Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570 ||| || |||| | ||||| ||| |||| || || ||| || || || ||||| Sbjct 235563 CGGTACTTCGAATGGGTTGATTCCTATGATTCGTGTTTTCAACAATACTGCTCGTTATGT 235504 Query 75571 AAATCAAGCGGGGCGTCGCAAGGG-----GT-CCATCGCGGTCTACTTGGAACCATGGCA 75624 | |||| || | |||| | || || | ||| | | ||||||||||||||| Sbjct 235503 GGACCAAGGAGG---TAACAAGAGACCTGGTGCCTTTGCGCTTTTCTTGGAACCATGGCA 235447 Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684 ||| |||||| | || || | || | || | ||| ||| | ||||| || ||| Sbjct 235446 TGCAGATATCTTCGACTTTGTCGATATTAGAAAAACCCATGGTAAAGAAGAAA-TCCGTG 235388 Query 75685 TA-GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGG 75743 | | ||| | || | | ||||||||||| |||||||| ||||| || ||| | |||| Sbjct 235387 CAAGGGATTTGTTCCCTGCTCTGTGGATTCCTGACCTTTTTATGAAACGTGTTCAAGAGG 235328 Query 75744 GTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTG 75803 ||| | ||| || | || | ||| || |||||| | || | ||||| Sbjct 235327 ATGGGCCCTGGACTTTATTTTCTCCCAGTGCTGCCCCAGGTTTAGATGATGTCTGGGGTG 235268 Query 75804 AGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTAC 75863 | || ||||||| || || || || ||| ||| ||| | | || | | | | Sbjct 235267 ATGAATTTGAAGAGCTATATACCCGTTACGAAAGGGAAGGTCGTGGTAAAACCATTAAA- 235209 Query 75864 CAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATAT 75922 ||| | | ||| ||| | || || | || |||| || || || || ||||| | Sbjct 235208 --GCC-CAAAAGTTATGGTATGCAATCTTACAAGCACAAACAGAAACAGGTACACCTTTC 235152 Query 75923 ATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAG 75982 ||| |||||||||| | ||||| | |||| |||||| |||| ||||| || || || Sbjct 235151 ATGGTTTACAAGGACTCATGTAATAGAAAGACAAACCAACAGAACTTGGGTACCATTAAA 235092 Query 75983 AGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGC 76042 || ||| | || ||||| | ||||| | ||||| || || ||||| Sbjct 235091 TCATCCAATTTGTGTTGTGAAATCGTCGAGTATTCTTCCCCAGATGAAACTGCCGTTTGT 235032 Query 76043 AATTTGGCATCAATCGCCCTTCCAAAGTATGTCAA------TGAAGAG------ACTCGC 76090 ||| | || || || || || ||| | |||| | |||||| ||| Sbjct 235031 AATCTAGCCTCTATTGCTCTCCCAGCATTTGTCGAGATGTCTGAAGATGGTAAAACTGCA 234972 Query 76091 ACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGA 76150 | || | ||| || | | |||||||| | || | ||||| | || | ||| || Sbjct 234971 AGTTATAATTTCGAGAGTTTACATGAAATTGCCAAAGTCATTACCCATAACTTGAACAGA 234912 Query 76151 GTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGA 76210 ||||| || | |||| |||||| ||| || |||| || |||||| || ||| Sbjct 234911 GTCATCGATCGTAATTATTATCCAGTTCCTGAAGCCAGAAATTCAAATATGAAGCATAGA 234852 Query 76211 CCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTG-TGCCGCTACGCATT 76269 ||||||| ||||||||||||||||| || ||| | ||| || ||| |||| | || Sbjct 234851 CCTATTGCCTTGGGTGTTCAAGGTCTGGCCGATACCTATATGATGTTGCGTCTAC-CCTT 234793 Query 76270 TGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATC 76329 ||| || | ||||| | |||| | || || |||||||| ||||| || | Sbjct 234792 TGAATCTAAAGAAGCTCAAACTTTGAACAAACAGATTTTCGAAACCATCTATCATGCTAC 234733 Query 76330 CCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTC 76389 || || || ||||||||||| || ||||| ||| || || || ||||| Sbjct 234732 TCTTGAAGCCTCCTGTGAATTGGCACAAAAGGAAGGTAAGTATTCCACTTTCGAAGGTTC 234673 Query 76390 TCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCA--AGCTCAAC 76447 ||| || || | || | || || ||||| |||| |||| | || ||| | | | Sbjct 234672 TCCAGCCTCTAAGGGTATTCTACAATTTGACATGT-GGAATGCTAAGCCATTTGGT-ATG 234615 Query 76448 TACGACTGGGATGTTCTCAAGGAACG-CA---TCAAGGAGAAGGGTCTTCGTAACAGTCT 76503 | || ||||| | || ||| || | || |||| | | || | | | ||| ||| Sbjct 234614 TGGGATTGGGA-GACCTTAAGAAAGGACATTGTCAA--ACATGGAT-TAAGAAAC--TCT 234561 Query 76504 TT--TGATGGCACCAATGCCAACAGCCTCCACCGCACAAA-TCTTGGGTAATAATGAATG 76560 || ||||| ||||||||||| ||||| || | |||| |||||||| |||| ||||| Sbjct 234560 TTGACAATGGCGCCAATGCCAACTGCCTCGACTTCTCAAATTCTTGGGT-ATAACGAATG 234502 Query 76561 CTTTGAACCATACACAACAAACATCTAC 76588 ||||||||| || ||||||| ||| Sbjct 234501 TTTTGAACCAGTGACTTCAAACATGTAC 234474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569473228960