Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03-
21] 17 sequences; 11,929,789 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq12 161 1e-34
seq11 125 1e-23
seq9 111 2e-19
>seq12
Length=1041178
Score = 161 bits (178), Expect = 1e-34
Identities = 175/230 (76%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | || || ||||| || ||||| || ||||| ||||||||| ||||
Sbjct 74706 ATGCAAATTTTTGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTCGAATCTTCT 74647
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| ||||| || ||||| || || |||||||| || ||||| || |||
Sbjct 74646 GATACCATTGATAACGTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCGGACCAA 74587
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| || ||||||| |||||||||||| || |||||| ||||| || || || || |
Sbjct 74586 CAGAGGTTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACCTTGTCCGACTACA-- 74529
Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
| ||||||| ||| | || | |||||||| |||||| ||||||| |||
Sbjct 74528 ACATCCAAAAGGAGTCCACTTTACATTTAGTATTAAGACTAAGAGGTGGT 74479
Score = 150 bits (166), Expect = 3e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | ||||| | ||||| |||||||| || |||| || ||| |||
Sbjct 74250 ATGCAAATTTTTGTCAAAACTCTAACTGGTAAAACTATAACCCTAGAGGTTGAATCTTCC 74191
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | |||| ||||| |||| ||| || ||||| ||||| || || || ||||| |||
Sbjct 74190 GACACTATTGACAACGTCAAAAGTAAGATCCAAGACAAAGAGGGTATCCCACCAGATCAA 74131
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|||||| | |||| ||| |||||||| || ||||| ||||| | || ||||||||
Sbjct 74130 CAAAGACTTATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 74071
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| ||||| | || | ||||||||| | ||||||||||| |||
Sbjct 74070 ATTCAGAAAGAATCTACTTTGCATTTAGTGCTGAGATTAAGAGGTGGT 74023
Score = 136 bits (150), Expect = 6e-27
Identities = 169/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || ||| |||| || ||||||| || ||||| || | || |||||| |||
Sbjct 74478 ATGCAGATCTTTGTTAAGACGCTGACTGGTAAGACTATAACCCTCGAGGTCGAATCTTCC 74419
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || ||||| || ||||| || || |||||||| || ||||| || |||
Sbjct 74418 GACACGATCGACAACGTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCGGACCAA 74359
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| || ||||||| |||||||||||| || |||||| ||||| || || || || |||
Sbjct 74358 CAGAGGTTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACCTTGTCCGACTACAAT 74299
Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| || ||| ||| | || || || ||||| || ||||| ||||| |||
Sbjct 74298 AT-TCAAAAGGAGTCTACTCTCCACTTAGTCTTGAGATTGAGAGGTGGT 74251
Score = 129 bits (142), Expect = 9e-25
Identities = 176/243 (72%), Gaps = 6/243 (2%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| |||| ||| |||| || || || || || | || || ||| ||
Sbjct 74022 ATGCAAATTTTTGTTAAGACACTGACGGGTAAGACCATAACCCTCGAGGTTGAATCGTCC 73963
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | |||| |||||||| | || || || ||||| ||||| || ||||| || |||
Sbjct 73962 GACACTATTGATAACGTGAAGAGCAAGATTCAGGATAAGGAAGGTATTCCTCCGGACCAA 73903
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
|| |||||||||| |||||||||||| || |||||| ||| || ||||| || || ||
Sbjct 73902 CAGAGATTGATTTTTGCCGGTAAGCAACTGGAAGATGGCAGGACGTTATCCGACTACAAC 73843
Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTGTAAAATTGAA 156061
|| || ||| || | || || || | || ||||| || || || ||| ||||||
Sbjct 73842 AT-TCAAAAGGAATCTACTCTCCACCTGGTCTTAAGGTTGAGGGGTGGT----AATTGAT 73788
Query 156062 TAA 156064
|||
Sbjct 73787 TAA 73785
Score = 123 bits (136), Expect = 4e-23
Identities = 169/234 (72%), Gaps = 4/234 (2%)
Strand=Plus/Plus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
|| |||||||| || | || || || || || || |||||||| ||||||| ||| |
Sbjct 481270 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTAGAAGTTGAATCT 481329
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
||||| | |||| || || || || || ||||| || ||||| || || || ||
Sbjct 481330 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGAC 481389
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|||||||||||||| | ||| |||||||| | |||||| ||||||||| || || ||
Sbjct 481390 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCTGACTAC 481449
Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051
| | ||||||| || | || | || || || || ||||| ||||| ||||
Sbjct 481450 A--ACATCCAAAAGGAATCCACTTTGCACTTGGTCTTGAGATTGAGAGGTGGTG 481501
>seq11
Length=681961
Score = 125 bits (138), Expect = 1e-23
Identities = 159/217 (73%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 155836 TTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATTTTAA 155895
|||| || |||||||| || || || || |||||||| ||| |||||| | ||| |
Sbjct 633030 TTAAGACTTTGACTGGTAAGACCATCACTTTAGAAGTTGAATCTTCTGACACCATTGACA 632971
Query 155896 ACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTT 155955
| || || || || ||||| || ||||| || || || || |||||||||||||| |
Sbjct 632970 ATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCT 632911
Query 155956 ATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA--GA 156013
|||||||||||| | ||||| ||||||||||| || || || || ||||| ||
Sbjct 632910 TTGCCGGTAAGCAATTGGAAGACGGTAGAACTTTATCTGACTACAACAT--CCAAAAGGA 632853
Query 156014 GGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
| || | ||||| || || ||||||||||| |||
Sbjct 632852 ATCCACTTTACATTTGGTTTTGAGATTAAGAGGTGGT 632816
>seq9
Length=439147
Score = 111 bits (122), Expect = 2e-19
Identities = 156/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 155832 TTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATT 155891
||| | || || |||||||| || || || || || ||||| ||| |||||| | ||||
Sbjct 64477 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 64536
Query 155892 TTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTG 155951
|| || || || || ||||| || ||||| || || || || ||||||||||||
Sbjct 64537 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 64596
Query 155952 ATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA 156011
|| | ||| |||||||| | ||||| ||||| || || || ||||| || |||
Sbjct 64597 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTATAACATTCAAAAA 64656
Query 156012 GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| | || | || ||||| || ||||| ||||| |||
Sbjct 64657 GAATCCACTTTACACTTAGTCTTGAGATTGAGAGGTGGT 64695
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731871844477200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |