Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03-
21] 17 sequences; 11,929,789 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq5 156 1e-32
seq9 149 2e-30
seq4 100 8e-16
seq15 84.2 6e-11
>seq5
Length=1007496
Score = 156 bits (172), Expect = 1e-32
Identities = 243/347 (70%), Gaps = 3/347 (1%)
Strand=Plus/Minus
Query 156012 ATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTTG---CCACCC 156068
||||||| ||| ||| ||||| |||| |||||| |||| || ||| ||||||
Sbjct 296642 ATATCAGCATGCCATGGTTCCAGGTACAGAGCAAAGGCACCAGGTCTTTTGTTACCACCC 296583
Query 156069 TGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAA 156128
|| || ||||| || || || ||||| || |||| | ||| ||||| | || || |||
Sbjct 296582 TGGTCGACATAACGGGCGGTATTATTAAAAACACGAATCATGGGAATTAACCCGTTAGAA 296523
Query 156129 GTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATATGTAGTCCA 156188
|| ||||| || || ||| | ||||||| ||| |||| |||||||||||||| |||
Sbjct 296522 GTACCATTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGAATATGTAGACCA 296463
Query 156189 ATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAATACCTTCA 156248
|||||||| | ||| ||||| ||| ||||| || | ||| | | ||||||| ||
Sbjct 296462 ATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTGTCGTAAATACCCTCG 296403
Query 156249 ATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGTGGTGTTCCA 156308
||||| || || | ||| | | | | || || | ||||||| ||| || |||
Sbjct 296402 ATAGAGTCCTCCTTCATGGCGACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCA 296343
Query 156309 GCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACAT 156355
|| || || | || || | |||||| |||| || || ||||||
Sbjct 296342 GCATTAAACAAAGTTGGAGAGGCATGAGTAAAGTATTTTAGAGACAT 296296
Score = 122 bits (134), Expect = 3e-22
Identities = 254/378 (67%), Gaps = 3/378 (1%)
Strand=Plus/Plus
Query 288849 CCTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGC 288908
||| ||||| ||||||| | ||||||| || | ||||||| ||| || || |
Sbjct 516202 CCTGTCAAATCTACCAGGCCTTAATAATGCTTTATCGAGAATATCGGGTCTATTGGTACC 516261
Query 288909 TGCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATT 288968
|| || ||||||| | || | | | |||| |||||||| | ||| ||||||||
Sbjct 516262 AGCTAAGACAACAACATGGTCAGCTGGAGTAAAACCATCCATTTCTACTAACATTTGATT 516321
Query 288969 AAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCttttttt 289028
|| || | || || ||||| || | |||| ||| |||| | ||| |||
Sbjct 516322 CAGCGTGTTCTCTCTCTCATCGTTAGCACCTGAAAAATTACCCTTTTG---CCTAGCTTT 516378
Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088
|| | ||||||||| |||||||| || | | | || | ||||| ||| ||| |
Sbjct 516379 CCCTATAGCATCAATCTCGTCAATAAACACAATCGAAGGTGCATTTTCTCTTGCAGTCTT 516438
Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148
|||||| |||||||| | | || |||| ||||||| |||||||||||||||| ||| |
Sbjct 516439 AAATAAATCTCTTACTCTTGCAGCACCAACACCAACAAACATTTCTACAAATTCTGAACC 516498
Query 289149 GGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208
|| || | || | || ||||| ||||| ||| | || || || |||||
Sbjct 516499 AGAAACAAAATAAAACGGGACGCCGGCTTCACCTGCAGTCGCCTTTGCAAGTAGGGTCTT 516558
Query 289209 ACCTGTTCCAGGTGGTCC 289226
||| || || || || ||
Sbjct 516559 ACCGGTACCTGGAGGACC 516576
>seq9
Length=439147
Score = 149 bits (164), Expect = 2e-30
Identities = 221/311 (71%), Gaps = 2/311 (1%)
Strand=Plus/Plus
Query 156060 TTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119
|| || || || || ||||| |||||||| || ||||| |||| | ||||||||| |
Sbjct 235489 TTACCTCCTTGGTCCACATAACGAGCAGTATTGTTGAAAACACGAATCATAGGAATCAAC 235548
Query 156120 CCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATA 156179
||||| ||||| || || || ||| |||| ||||| | || || | || | ||||
Sbjct 235549 CCATTCGAAGTACCGTTAGTACCGGCGATATAAGAACCTGTGGAACGGATGTTGTTAATA 235608
Query 156180 TGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAA 156239
|| || |||| |||||||| |||||||| ||| ||||| || | ||||| ||
Sbjct 235609 TGAAGACCAACACCACCTGCAGTCTTAGAAATCATAGCACATTCTTTCAAAGTATCATAA 235668
Query 156240 ATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGT 156299
|| ||||||||||| ||||| | ||| | | ||| | || ||| | ||| || ||
Sbjct 235669 ATGCCTTCAATAGAGTCATCCTTCATGGCAATTAGGAAACATGAAGACATTTGGGGATGT 235728
Query 156300 GGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATA-CTTATTAGACATATA 156358
|| || ||||||||||||| || || | || ||| | ||||| |||| ||||| |
Sbjct 235729 GGAGTACCAGCGTTGAATAAGGTTGGGGAAGCGTGAGTGAAATATCTTA-ACGACATCAA 235787
Query 156359 ATCGTATGTCT 156369
|| ||| ||||
Sbjct 235788 ATTGTAGGTCT 235798
>seq4
Length=1513677
Score = 100 bits (110), Expect = 8e-16
Identities = 134/186 (72%), Gaps = 3/186 (2%)
Strand=Plus/Plus
Query 301767 TAAATAAATAGTACAGGATGGATTCTTTGTGTTTTCCGATAGAGACAGAATTTCTTCAAT 301826
||| |||| ||| |||| ||| | || |||||| | | | || |||||||| |
Sbjct 216334 TAAGTAAACAGTCAAGGAAGGAGTTTTCATGTTTTTGGCCACATTCAAAATTTCTTTTAA 216393
Query 301827 ACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAAGTGGAAAGTATT 301886
||||||||||||| || || || |||||| |||||||||||||| ||||| |||||
Sbjct 216394 ACGGGGAACACCAGAAGTAACTTT---CTTGGAAGCAACACCAGCAAAATGGAAGGTATT 216450
Query 301887 CAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCATACCAACCATTTC 301946
|| || | || || | || |||||||| ||| || || | | ||||||||||||
Sbjct 216451 TAGTGTCATCTGTGTGGCCGGTTCACCAATGGATTGGGCTGCTAGAACACCAACCATTTC 216510
Query 301947 TCCTGG 301952
|| ||
Sbjct 216511 ACCAGG 216516
Score = 98.7 bits (108), Expect = 3e-15
Identities = 107/142 (75%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 302539 TTTCTTACGGTCATATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGC 302598
|||||| || |||| ||| | ||| || ||||| | | || | |||||||||
Sbjct 217121 TTTCTTGTAGTGTTATCGTAATGGACCATGATATCTTCTAGAGCTTTCACTAAACGACGT 217180
Query 302599 TGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCC 302658
||||||||||| ||| || |||||| || || ||||| || ||||| |||||||||||
Sbjct 217181 TGAATATAACCTGTTTCAGCTGTTTTAACGGCGGTATCGATAAGACCTTCACGACCACCC 217240
Query 302659 ATAGCATGGAAGAATAGCTCTT 302680
|| || |||||||| | |||||
Sbjct 217241 ATTGCGTGGAAGAAAAACTCTT 217262
>seq15
Length=1052871
Score = 84.2 bits (92), Expect = 6e-11
Identities = 332/511 (65%), Gaps = 16/511 (3%)
Strand=Plus/Plus
Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544
||||| || | ||||||||| ||||| ||||| |||||||| | |||||||| || |
Sbjct 579276 GCACCATGAGCAATCATACAGTCACGTTCCATCTCACCGAATCTTAGACCACCGTCTCTT 579335
Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAAC---CATAGGACCGATGGAGCGGCTA 251601
| |||||||| | ||||| | || | || || ||| ||||| | | | |
Sbjct 579336 GATCTACCCTCTACTGGCTGTCTTGTCA-AT--ACTTGCATTGGACCACGTGCTCTGGCA 579392
Query 251602 TGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGATG 251661
|| ||| |||| |||||||| | | || || || ||| |||||| | ||| ||
Sbjct 579393 TGGATCTTGTCATCCACCATATGTCTTAATCGTTGATAATATGTGGGACCAAAGAAAATT 579452
Query 251662 CTCGAAGGCATTTGCTCT---CCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGAT 251718
| | | |||| ||| | || || || |||||||||||||||| ||| ||||
Sbjct 579453 -TGG--GCCATTAGCTTTTTACCGGTGTGACCGTTATACATAACTTCAAACCCACGAGAT 579509
Query 251719 TCATAACCAAGTTTCTGTAGCTCTGAAGCAATATCACCAATCTTGAATTTGC-TAAAACT 251777
| ||||||| | | | || | || ||| | | | || ||| | | |||
Sbjct 579510 TGATAACCATGCTCGCGCAGTAGTTTAGATATACCTTCTA-CTGTAATGTCTGTGAAAGG 579568
Query 251778 GGTGCCGTCTCCGTAAAGACCCATTTGAATCAACACTTTGCCTAAAAGTGTCTCTTTCAG 251837
| | | || || | | ||| | | | ||||| | || | || | |
Sbjct 579569 AGAGGCATCACCTTCATTACCGGATAGTGCCGCGACTTTACTCAACAAACATTCAATTAA 579628
Query 251838 TTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAG 251897
||||| | |||||||||| |||||||| || ||||||||||| | || || |
Sbjct 579629 ATGGGCAACAGTCATACGAGATGGAATAGCGTGAGGATTGATGATTAAATCCGGAACAAT 579688
Query 251898 TCCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATA-ATGTTTCCAATAGTTCCCTTTT 251956
|| || || || || ||||||| ||| || | ||| || | |||||||| |||||||
Sbjct 579689 ACCTTCTGCTGTAAATGGCATAT-CTTCTCTACGATATGTGATACCAATAGTACCCTTTT 579747
Query 251957 GTCCGTGACGAGAACTGAACTTATCACCAAT 251987
| || |||||||| || || ||||||||
Sbjct 579748 GACCATGACGAGAGGCAAATTTGTCACCAAT 579778
Score = 84.2 bits (92), Expect = 6e-11
Identities = 106/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 233272 AGCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATT 233331
|||||| | ||||| | |||||| | |||||| ||||| | | |||||||||||| |
Sbjct 689706 AGCACCATAGGCAATTACACAATCTCTTTCCATCTCACCCAACCTCAGACCACCATCCCT 689765
Query 233332 TGACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGATAATT 233391
|| ||||| | | |||||| || ||||||| ||||| || |||| | ||
Sbjct 689766 GGATCTACCTTCAGTAGGTTGACGTGTCAAAACAGCCCTTGGGCCACGAGCTCTTGCATG 689825
Query 233392 AATTTTATCTTTAACCATATGCTTCA 233417
|| |||||| ||||||||||||||
Sbjct 689826 CATCTTATCTAAAACCATATGCTTCA 689851
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471817279419729
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |