Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03-
21] 17 sequences; 11,929,789 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq12 150 3e-31
seq9 111 2e-19
>seq12
Length=1041178
Score = 150 bits (166), Expect = 3e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| || | ||||| |||| || ||||| || || | || || ||| | ||
Sbjct 74249 TGCAAATTTTTGTCAAAACTCTAACTGGTAAAACTATAACCCTAGAGGTTGAATCTTCCG 74190
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| |||||| | || || |||| ||| || ||| ||||| || || ||||| |||||||
Sbjct 74189 ACACTATTGACAACGTCAAAAGTAAGATCCAAGACAAAGAGGGTATCCCACCAGATCAAC 74130
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||||| |||||||| ||||| ||| | || || ||||||| | | |||||||| |
Sbjct 74129 AAAGACTTATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAACA 74070
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| || |||||||| ||| | |||||||| | |||||||||| ||||
Sbjct 74069 TTCAGAAAGAATCTACTTTGCATTTAGTGCTGAGATTAAGAGGTGGTA 74022
Score = 114 bits (126), Expect = 2e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| || | || || || || || ||||| || || | || || ||| | |
Sbjct 74705 TGCAAATTTTTGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTCGAATCTTCTG 74646
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| ||| | || || || ||||| || |||||||| ||||| || || ||||
Sbjct 74645 ATACCATTGATAACGTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCGGACCAAC 74586
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| || | |||||||| ||||| ||| | || ||| |||||| || | || || || |
Sbjct 74585 AGAGGTTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACCTTGTCCGACTACAACA 74526
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| ||||| || || ||| | |||||||||||| || ||||||| ||||
Sbjct 74525 TCCAAAAGGAGTCCACTTTACATTTAGTATTAAGACTAAGAGGTGGTA 74478
>seq9
Length=439147
Score = 111 bits (122), Expect = 2e-19
Identities = 153/214 (71%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 146046 AAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAAT 146105
|| || || || || || || || ||| | || || ||| | || |||||| | |||
Sbjct 64483 AAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATTGACAAT 64542
Query 146106 GTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTT 146165
|| || || || ||| || ||||| || ||||| || ||||||||| | || |||
Sbjct 64543 GTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCTTT 64602
Query 146166 GCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCG 146225
|| ||||| ||||| || || |||||| || | || ||||| || |||||||||||
Sbjct 64603 GCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTATAACATTCAAAAAGAATCC 64662
Query 146226 ACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
||| | || ||||| || |||| ||||| ||||
Sbjct 64663 ACTTTACACTTAGTCTTGAGATTGAGAGGTGGTA 64696
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 786166232939640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |