Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03- 21] 17 sequences; 11,929,789 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq15 113 6e-20 >seq15 Length=1052871 Score = 113 bits (124), Expect = 6e-20 Identities = 207/301 (69%), Gaps = 2/301 (1%) Strand=Plus/Minus Query 171666 AGGTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTT-ATGCGGGTTTA 171724 ||||||||| ||||| | | |||||| || ||||||| | ||||| ||| ||||| | Sbjct 439233 AGGTGTTAAGATTTGGGACGGTAATGGATCCCGTGAATATCTAGATAAGATG-GGGTTCA 439175 Query 171725 CTGAAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGGG 171784 | || ||||| | || |||||||| || |||||||||| |||||||| ||| || | Sbjct 439174 CAGATAGAAAGGTGGGGGATTTAGGGCCCGTTTATGGATTCCAATGGAGGCATTTCGGTG 439115 Query 171785 CTCAATATATCGACTGTTATACAGATTACACAGGACAAGGAGTGGACCAATTAAGTCAAA 171844 || |||| | |||| || || || | ||||| || | || ||||| | || Sbjct 439114 CTAAATACAAGACCTGTGATGACGACTATGCTGGACAGGGTATTGATCAATTGAAGCAGG 439055 Query 171845 CTATTAATACTTTACAAAACAACCCAGAAAGTAGAAGGATGTTAATTGATAGTTGGAATG 171904 ||| ||| || | | || || | |||||| || | || | ||||||| Sbjct 439054 TCATTCATAAACTAAAGACAAATCCTTATGATAGAAGAATTATTATGAGTGCTTGGAATC 438995 Query 171905 TACCTCAACTTGATAAAATGGTTCTTCCTCCTTGCCACACTTTAGCACAATTTTATGTCA 171964 | || | |||| || |||| | | || || ||||||| ||| ||||||||||||||| Sbjct 438994 CAGCTGATTTTGACAAGATGGCTTTGCCACCATGCCACATTTTTTCACAATTTTATGTCA 438935 Query 171965 G 171965 | Sbjct 438934 G 438934 Score = 82.4 bits (90), Expect = 1e-10 Identities = 94/124 (76%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 192998 ACCTGAAATAGGGGATAAATTTTGTTCGGGA-ATGGCCCAAAAAGGAACTTGTGGTATGA 193056 ||||||| |||| |||||||||| ||| || |||| | ||||||| ||||||||| | Sbjct 690216 ACCTGAATTAGGTGATAAATTTTCTTCTAGACATGGTC-AAAAAGGTGTTTGTGGTATTA 690158 Query 193057 TTTATTCACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACCAGATATTATTATTA 193116 || |||||||||||||| |||| | |||||| || ||||| ||||| || | Sbjct 690157 TTGTAAAGCAAGAAGATATGCCTTTTAACGATCAAGGTATAGTTCCAGACATTATCATGA 690098 Query 193117 ATCC 193120 |||| Sbjct 690097 ATCC 690094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628531066437120