Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03-
21] 17 sequences; 11,929,789 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq5 156 1e-32
seq9 149 1e-30
seq4 129 1e-24
seq10 107 5e-18
>seq5
Length=1007496
Score = 156 bits (172), Expect = 1e-32
Identities = 560/865 (65%), Gaps = 18/865 (2%)
Strand=Plus/Plus
Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363
||||||||||| |||||| | |||||| |||||||||| | |||| || | |
Sbjct 296152 TATTTTGGTTTTAAAACTTTGGAACGTTCTTATTTACTAAGAATCAACGGTCAAGTGGCC 296211
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423
|||||||| |||||| | || | | || || | || || || || || || ||
Sbjct 296212 GAACGTCCACAACACTTAATTATGAGAGTCGCACTGGGCATCCACGGTAGAGACATCGAA 296271
Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACC 110483
|||| | | ||| ||| | || | | ||| | || |||||| |||| ||
Sbjct 296272 GCTGCTCTAGAAACATATAACTTAATGTCTCTAAAATACTTTACTCATGCCTCTCCAACT 296331
Query 110484 CTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAGGAATTAA 110542
| ||||| || || ||| | ||| || | ||||| |||||| | | || ||
Sbjct 296332 TTGTTTAATGCTGGTACTCCAAAACCTCAAATGTCCTCTTG-TTTCTTGGTCGCCATGAA 296390
Query 110543 CGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAA 110602
|| || ||||| || |||||||| || || | |||||| |||| | ||||| ||||
Sbjct 296391 GGAGGACTCTATCGAGGGTATTTACGACACTTTGAAAGAATGTGCTTTGATTTCCAAAAC 296450
Query 110603 CTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAAC 110662
|||| || |||||| | || ||||| | ||||| |||| || | | || ||
Sbjct 296451 TGCTGGTGGTATTGGTCTACATATTCATAACATTCGTTCAACTGGTTCTTACATTGCTGG 296510
Query 110663 AGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAA 110722
| || ||| |||| | || | |||| ||| | | || || || | || ||
Sbjct 296511 TACAAATGGTACTTCTAACGGGTTAATTCCCATGATTCGTGTTTTTAATAATACCGCCCG 296570
Query 110723 ATATGTGAATCAAGGTGGTAAGAGAAA---TGGCTCATTTGCTATCTATCTCGAACCTTG 110779
||||| | || |||||||| | || ||| | |||||| | || || ||||| ||
Sbjct 296571 TTATGTCGACCAGGGTGGTAACAAAAGACCTGGTGCCTTTGCTCTGTACCTGGAACCATG 296630
Query 110780 GCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAA- 110838
|||| | ||||| ||||| || | || | | || || || || | ||||| |||
Sbjct 296631 GCATGCTGATATCTTTGATTTTATTGATATCAGAAAGAACCACGG---TAAAGAAGAAAT 296687
Query 110839 --GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCA 110896
| ||| | ||||| ||| ||| |||||||| | ||| | |||||||||||||| |
Sbjct 296688 TCGTGCAAGAGATTTGTTTCCTGCTCTGTGGATTCCTGATCTTTTCATGAAACGTGTCGA 296747
Query 110897 AGAAAATGGCATGTGGTCTCTTATGTGTCC-TCATCGTTCTCCTGGTCTATCTGA-TGTA 110954
||||||||| | ||| || | | | ||| || | |||| |||||| || |||
Sbjct 296748 AGAAAATGGGACTTGGACTTTGTTCTCTCCAACAGC-AGCTCCCGGTCTAAGCGACTGT- 296805
Query 110955 TATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAA 111014
|| || | || ||||||| || || || ||||||||||| | | ||
Sbjct 296806 TACGGTGACGATTTTGAAGCTCTATATACCCGCTACGAAAAAGAAGG---TCGTGGTAAG 296862
Query 111015 CAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACT 111074
||| ||||||| || | |||| || | ||| ||||| ||||||||| ||
Sbjct 296863 ACCATTAAAGCTCAAAAATTATGGTATTCCATTTTGGAAGCACAAACTGAAACTGGTACA 296922
Query 111075 CCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACA 111134
|||| | | | ||||| ||| | || | || ||||| |||| || || ||
Sbjct 296923 CCTTTTGTGGTTTATAAGGATGCTTGCAACAGAAAGTCTAACCAAAAAAACTTGGGTGTT 296982
Query 111135 ATTAAGTCTAGTAATTTGTGCTGTG 111159
|| ||||| || || |||||||
Sbjct 296983 ATCAAGTCATCGAACTTATGCTGTG 297007
>seq9
Length=439147
Score = 149 bits (164), Expect = 1e-30
Identities = 401/609 (66%), Gaps = 11/609 (2%)
Strand=Plus/Minus
Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363
|||||||| ||||| ||| | || ||| | ||||| || | | || || || |
Sbjct 235928 TATTTTGGGTTCAAGACTTTGGAGCGTTCGTATTTGCTAAGATTGAACGGTGAAGTGGCA 235869
Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423
||||| || || ||| || || | ||||| ||| | ||||| || || |||||| |
Sbjct 235868 GAACGGCCACAGCACTTGGTTATGCGTGTGGCGCTGGGTATCCACGGTAGTGATATCGAG 235809
Query 110424 GCTGTTATTGAATGTTATGATGT-ATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTAC 110482
|||| | | || || | || || || | | | | ||| ||| | || ||
Sbjct 235808 TCTGTGCTGAAGACCTACAATTTGATGTCGTTAAGATATTTC-ACTCACGCTTCCCCAAC 235750
Query 110483 CCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTAA 110542
| |||| ||||| || ||| ||| || |||| || || || | | || ||
Sbjct 235749 CTTATTCAACGCTGGTACTCCACATCCCCAAATGTCTTCATGTTTCCTAATTGCCATGAA 235690
Query 110543 CGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAA 110602
||||| ||||||||||| ||||||||| || | |||||| |||| | |||||||| |
Sbjct 235689 GGATGACTCTATTGAAGGCATTTATGATACTTTGAAAGAATGTGCTATGATTTCTAAGAC 235630
Query 110603 CTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAAC 110662
| || || ||||| |||| || | | || || || | ||| | |||||||
Sbjct 235629 TGCAGGTGGTGTTGGTCTTCATATTAACAACATCCGTTCCACAGGTTCTTATATCGCCGG 235570
Query 110663 AGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAA 110722
| || ||| |||| | ||| | |||| ||| | | || |||||| | |||||
Sbjct 235569 TACTAACGGTACTTCGAATGGGTTGATTCCTATGATTCGTGTTTTCAACAATACTGCTCG 235510
Query 110723 ATATGTGAATCAAGGTGGT---AAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTG 110779
|||||| | ||||| ||| |||||| ||| | ||||| | | | ||||| ||
Sbjct 235509 TTATGTGGACCAAGGAGGTAACAAGAGACCTGGTGCCTTTGCGCTTTTCTTGGAACCATG 235450
Query 110780 GCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAA- 110838
|||| ||||||| || || || | || || | |||| || || | ||||| |||
Sbjct 235449 GCATGCAGATATCTTCGACTTTGTCGATATTAGAAAAACCCATGG---TAAAGAAGAAAT 235393
Query 110839 --GAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCA 110896
| ||| | ||||| || ||| |||||||| | || | || ||||||||||||||
Sbjct 235392 CCGTGCAAGGGATTTGTTCCCTGCTCTGTGGATTCCTGACCTTTTTATGAAACGTGTTCA 235333
Query 110897 AGAAAATGG 110905
||| ||||
Sbjct 235332 AGAGGATGG 235324
>seq4
Length=1513677
Score = 129 bits (142), Expect = 1e-24
Identities = 156/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 305318 GACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCT 305377
|| |||||| ||||||||||| | ||||| ||| |||||||||||||||||||||||
Sbjct 218382 GATAATGATCCAGTTCTGTTCAACCGTCAACCCTCATTGCATAAAATGTCTATGATGGCT 218323
Query 305378 CATAAAGTCAAAGTATTATCTGGATT-GACATTTCGATTAAATGTAAGTGCTTGTACGCC 305436
|| | ||| ||||| | || | ||| |||||| |||| ||| | || | | ||
Sbjct 218322 CACAGAGTGAAAGT-TATTCCGTATTCCACATTTAGATTGAATTTGTCTGTTACATCTCC 218264
Query 305437 TTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAATCAAAGGTTAC 305496
|||||||| ||||| || || || ||||||||| | || |||||||| || ||| ||
Sbjct 218263 ATATAATGCCGATTTCGACGGTGACGAAATGAATCTTCACGTACCTCAGTCCGAGGAAAC 218204
Query 305497 AATGACTGAATTATCAGAAATATGTTCTGT 305526
|| | | ||| | || || ||||| ||||
Sbjct 218203 AAGGGCAGAACTGTCCCAATTATGTGCTGT 218174
Score = 91.5 bits (100), Expect = 3e-13
Identities = 123/167 (74%), Gaps = 6/167 (4%)
Strand=Plus/Minus
Query 304886 TTACAATATCATATTGCAACATTAATGGATAATGAAATTGCTGG--AATTATGCAGGCAT 304943
||||||| |||| |||| || | ||||||||||| |||||||| || | ||||| |
Sbjct 218808 TTACAATTTCATGTTGCCACTTATATGGATAATGATATTGCTGGCCAACCA--CAGGC-T 218752
Query 304944 CT-CAAAGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGT 305002
|| |||| || || | || |||| |||| | || | || ||||||||||||
Sbjct 218751 CTACAAAAGTCCGGTCGTCCCGTAAAATCTATTCGTGCTCGTTTGAAGGGTAAAGAGGGT 218692
Query 305003 CGTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAG 305049
||||| | |||||| ||||||| || |||||||||||| |||||
Sbjct 218691 CGTATCAGGGGTAATTTAATGGGTAAGCGTGTTGATTTTTCAGCAAG 218645
>seq10
Length=750185
Score = 107 bits (118), Expect = 5e-18
Identities = 344/528 (65%), Gaps = 17/528 (3%)
Strand=Plus/Plus
Query 131489 TTCTGGACTGTTGAAGAGATCGATATGACCAAAGATATTGATGATTGGGAAAAATTAACC 131548
|||||||| | |||||| || ||| || | || |||||| |||| ||| | || ||
Sbjct 397601 TTCTGGACCGCTGAAGAAATTGATTTGTCTAAGGATATTCATGACTGGAACAACAGAA-- 397658
Query 131549 TTGAATGAAAAAGA------TTTTGTTTCCAAAGTTCTTGCATTCTTCGCCGGAAGTGAT 131602
|||| ||||| || |||| |||| | ||||||||| || ||||||| |||
Sbjct 397659 -TGAACGAAAACGAGAGATTTTTTATTTCTAGAGTTCTTGCCTTTTTCGCCGCTTCTGAC 397717
Query 131603 GGCATTGTTATTGAAAATCTTGTTATTAATTTCATTCAAGAAATTGATATTCCTGAAGTA 131662
|| ||||||| |||||| | ||| || ||| | ||| || | ||||| || | |
Sbjct 397718 GGTATTGTTAATGAAAACTTGGTTGAAAACTTCTCTACCGAAGTTCAAATTCCAGAGGCA 397777
Query 131663 ACATCGTTCTACACATTTCAAGCCGCTG-TTGAATCTATTCATAGCGAGATGTATTCATT 131721
| ||||| |||| || || ||||| ||||||| || | || || ||
Sbjct 397778 AAGAGTTTCTATGG-TTTCCAGATCATGATTGAAAATATTCATTCTGAAACTTACTCCTT 397836
Query 131722 ATTGATTGAGAGTCTTGTTAAAAATGAAGATGATAAAAATAAATTATTTG---ATGCTGT 131778
|||||| || | || |||| || | | ||| | |||| || |||| |
Sbjct 397837 ATTGATCGATAC-CTACATAAAG--GACCCTAAGGAAAGTGAATTCTTGTTCAATGCCAT 397893
Query 131779 AAATAAATTTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGA 131838
| | | || | ||| |||| || || |||||| | | |||||||||||| |
Sbjct 397894 TCACACCATCCCAGAAATCGGTGAGAAGGCCGAGTGGGCTCTAAGATGGATTCAAGACGC 397953
Query 131839 TTCCGCTAATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTC 131898
| ||| ||| | |||||| || || ||||| | | | |||||| | ||||| ||
Sbjct 397954 TGACGCCTTGTTTGGTGAAAGACTAGTCGCCTTTGCCTCTATCGAAGGTGTCTTCTTCTC 398013
Query 131899 AGGTGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATT 131958
||| | ||| | | || || ||| | |||||| | || ||||||| || | | ||
Sbjct 398014 CGGTTCCTTCGCTTCCATTTTCTGGTTGAAGAAGAGAGGTATGATGCCCGGTTTGACCTT 398073
Query 131959 GTCCAATCAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGC 132006
|| || |||| || | ||||| |||| ||||| || || |||||
Sbjct 398074 CTCTAACGAATTGATTTGCAGAGACGAAGGTTTGCACACCGACTTTGC 398121
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186812541497337
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |