Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03-
21] 17 sequences; 11,929,789 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq5 196 6e-45
seq2 104 3e-17
>seq5
Length=1007496
Score = 196 bits (216), Expect = 6e-45
Identities = 809/1269 (64%), Gaps = 24/1269 (2%)
Strand=Plus/Minus
Query 118199 TGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGC 118258
||| ||||| || ||||| | |||||| ||||||| |||||| || || ||||| |||||
Sbjct 297588 TGGTTCAAAACATTCATTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGC 297529
Query 118259 CATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTC 118318
|||| | ||| | | ||| | || | | | || | | | || |||||| ||
Sbjct 297528 CATGGTCAAAGAGTTTCTAATACCATGTTTCATGACATCTTTCCTCAAAGTGTCCCAATC 297469
Query 118319 GTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGG 118378
| || | | | | ||||||||| ||||| || |||||||| || |||||
Sbjct 297468 CCACATGCCGTAGGGTTTTTGGTCCCACATATCGAACTGAAGTATACCTTGAGAAGCTGG 297409
Query 118379 CGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAG 118438
|| || | || || || |||||||| || | || ||||| | || || |
Sbjct 297408 AGAACCTTGGAAGGTTTCGTATGGGCCGTCCTTTTGAGCTAATTCACAAGAAGCTTCCAT 297349
Query 118439 GGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATC 118498
|| || ||||| ||||||||||| || | ||| | | |||||| || |||||
Sbjct 297348 GGAGGCATGATAAATTGTTTCAAAGATTTGGATATTTAGTAAACGGGCCTCTTCAGAATC 297289
Query 118499 AAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGG 118558
||| | | || ||| ||||| || || | |||||| ||||| | | |||||||
Sbjct 297288 AAAGGGTAAACGTAGCAACATAAAAGTGTCAGCCAAACCTTGAACACCCAAGGCAATTGG 297229
Query 118559 GCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAAC 118618
| |||||||||||| || | | || || | ||| || |||| | ||| |||||
Sbjct 297228 CCTATGTCTCATATTGGATCTTCTCGCTTCTTCAATGGGGTAGTAATTACGATCAATAAC 297169
Query 118619 CCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACT 118678
|| |||| ||| || ||||| || | ||||| || | |||| | | | || |
Sbjct 297168 TCTGTTTAAATTACGAGTAACAACTTTGGCAATTTCGTGTAATTTTTTGAAGTTGTAAGT 297109
Query 118679 GCGAGTCT---CTTCAT-TGACAT--------ACTTAGGAAGGGCGATTGACGCCAGATT 118726
||| | | || | |||| | || || | ||| | || |||| ||
Sbjct 297108 AGAAGTTTGGCCGTCCTCTGACGTTTCAATGAACGCTGGCAAGGCAACGGAAGCCAAGTT 297049
Query 118727 ACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACT 118786
||| |||| || || ||| | | | |||||| | |||||| ||| ||||| ||
Sbjct 297048 ACAAACAGCAGTTTCGTCCGGAGCTGAGTACTCAACAATTTCACAGCATAAGTTCGATGA 296989
Query 118787 CTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCAT 118846
||| || |||||||| ||||| || |||||| |||| || |||||||| |||| ||
Sbjct 296988 CTTGATAACACCCAAGTTTTTTTGGTTAGACTTTCTGTTGCAAGCATCCTTATAAACCAC 296929
Query 118847 GTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCAGCTGG 118906
| || || || || || ||||| | | | ||| | | ||| | | ||||
Sbjct 296928 AAAAGGTGTACCAGTTTCAGTTTGTGCTTCCAAAATGGAATACCATAATTTTTGAGCT-- 296871
Query 118907 CACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTC 118966
| ||| || | || || |||| ||||| || || || |||||||| || ||
Sbjct 296870 -TTAATGGTCTTACCACGACCTTCTTTTTCGTAGCGGGTATATAGAGCTTCAAAATCGTC 296812
Query 118967 ACC--CACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCA 119024
||| || | | || ||| || || || ||| |||| | || ||| |||
Sbjct 296811 ACCGTAACAGTCGCTTAGA--CCGGGAGCTGCTGTTGGAGAGAACAAAGTCCAAGTCCCA 296754
Query 119025 CCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGA 119084
|| || || || |||||||| || || || ||||| || || | || | ||| |
Sbjct 296753 TTTTCTTCGACACGTTTCATGAAAAGATCAGGAATCCACAGAGCAGGAAACAAATCTCTT 296694
Query 119085 CAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCG 119144
||| |||||| | || || || | | || | ||| || | |||||| ||
Sbjct 296693 GCACGAATTTCTTCTTTACCGTGGTTCTTTCTGATATCAATAAAATCAAAGATATCAGCA 296634
Query 119145 TGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTACGACGACCAGCCTGGTTTAC 119200
||||| ||||||||||||| || | | ||| ||| | |||| |||||| ||
Sbjct 296633 TGCCATGGTTCCAGGTACAGAGCAAAGGCACCAGGTCTTTTG-TTACCACCCTGGTCGAC 296575
Query 119201 ATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATT 119260
||| | || || ||||| ||||||| ||| ||||| | || | || |||||
Sbjct 296574 ATAACGGGCGGTATTATTAAAAACACGAATCATGGGAATTAACCCGTTAGAAGTACCATT 296515
Query 119261 TGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCC 119320
||| || ||| ||| | | | | | | || || || | ||||||||| ||
Sbjct 296514 TGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGAATATGTAGACCAATACCACC 296455
Query 119321 TGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTC 119380
|| || || || || || || | | | || |||| || || ||||| |||||
Sbjct 296454 AGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTGTCGTAAATACCCTCGATAGAGTC 296395
Query 119381 ACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAA 119440
|||| | |||| | ||| || ||||||||||| | || |||||||| || ||
Sbjct 296394 CTCCTTCATGGCGACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCAGCATTAAA 296335
Query 119441 GAGAGTTGG 119449
| ||||||
Sbjct 296334 CAAAGTTGG 296326
>seq2
Length=801843
Score = 104 bits (114), Expect = 3e-17
Identities = 119/160 (74%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 167948 CTACGGTCGCGTGGCGCCAAGATCTGGACTCGCTGTGAAGAGTGGTATCCAAGTTGGTGC 168007
|||||||||| | ||||||||||| || || || || || | ||||| ||| |||||
Sbjct 714643 CTACGGTCGCATTGCGCCAAGATCAGGCCTAGCAGTAAAAAACGGTATTCAAACCGGTGC 714702
Query 168008 GGGTGTTGTTGATCCAGACTATACGGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGGCA 168067
|||||||| || ||| || || |||||||| ||||| || | ||||||||| ||
Sbjct 714703 TGGTGTTGTCGACAGAGATTACACTGGTGAAGTTAAAGTAGTCTTATTCAATCACTCACA 714762
Query 168068 CACAGATTTCCAAATCAAAAAGGGGGATCGCATCGCGCAA 168107
| ||||||| ||||| || || |||||| | || |||
Sbjct 714763 GAGAGATTTCGCCATCAAGAAAGGTGATCGCGTAGCCCAA 714802
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618435068582520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |