Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03- 21] 17 sequences; 11,929,789 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq5 196 6e-45 seq2 104 3e-17 >seq5 Length=1007496 Score = 196 bits (216), Expect = 6e-45 Identities = 809/1269 (64%), Gaps = 24/1269 (2%) Strand=Plus/Minus Query 118199 TGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGC 118258 ||| ||||| || ||||| | |||||| ||||||| |||||| || || ||||| ||||| Sbjct 297588 TGGTTCAAAACATTCATTATAACCCAATATTTGGGATGTGGATGCAGTAGGCATTGGTGC 297529 Query 118259 CATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTC 118318 |||| | ||| | | ||| | || | | | || | | | || |||||| || Sbjct 297528 CATGGTCAAAGAGTTTCTAATACCATGTTTCATGACATCTTTCCTCAAAGTGTCCCAATC 297469 Query 118319 GTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGG 118378 | || | | | | ||||||||| ||||| || |||||||| || ||||| Sbjct 297468 CCACATGCCGTAGGGTTTTTGGTCCCACATATCGAACTGAAGTATACCTTGAGAAGCTGG 297409 Query 118379 CGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAG 118438 || || | || || || |||||||| || | || ||||| | || || | Sbjct 297408 AGAACCTTGGAAGGTTTCGTATGGGCCGTCCTTTTGAGCTAATTCACAAGAAGCTTCCAT 297349 Query 118439 GGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATC 118498 || || ||||| ||||||||||| || | ||| | | |||||| || ||||| Sbjct 297348 GGAGGCATGATAAATTGTTTCAAAGATTTGGATATTTAGTAAACGGGCCTCTTCAGAATC 297289 Query 118499 AAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGG 118558 ||| | | || ||| ||||| || || | |||||| ||||| | | ||||||| Sbjct 297288 AAAGGGTAAACGTAGCAACATAAAAGTGTCAGCCAAACCTTGAACACCCAAGGCAATTGG 297229 Query 118559 GCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAAC 118618 | |||||||||||| || | | || || | ||| || |||| | ||| ||||| Sbjct 297228 CCTATGTCTCATATTGGATCTTCTCGCTTCTTCAATGGGGTAGTAATTACGATCAATAAC 297169 Query 118619 CCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACT 118678 || |||| ||| || ||||| || | ||||| || | |||| | | | || | Sbjct 297168 TCTGTTTAAATTACGAGTAACAACTTTGGCAATTTCGTGTAATTTTTTGAAGTTGTAAGT 297109 Query 118679 GCGAGTCT---CTTCAT-TGACAT--------ACTTAGGAAGGGCGATTGACGCCAGATT 118726 ||| | | || | |||| | || || | ||| | || |||| || Sbjct 297108 AGAAGTTTGGCCGTCCTCTGACGTTTCAATGAACGCTGGCAAGGCAACGGAAGCCAAGTT 297049 Query 118727 ACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACT 118786 ||| |||| || || ||| | | | |||||| | |||||| ||| ||||| || Sbjct 297048 ACAAACAGCAGTTTCGTCCGGAGCTGAGTACTCAACAATTTCACAGCATAAGTTCGATGA 296989 Query 118787 CTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCAT 118846 ||| || |||||||| ||||| || |||||| |||| || |||||||| |||| || Sbjct 296988 CTTGATAACACCCAAGTTTTTTTGGTTAGACTTTCTGTTGCAAGCATCCTTATAAACCAC 296929 Query 118847 GTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCAGCTGG 118906 | || || || || || ||||| | | | ||| | | ||| | | |||| Sbjct 296928 AAAAGGTGTACCAGTTTCAGTTTGTGCTTCCAAAATGGAATACCATAATTTTTGAGCT-- 296871 Query 118907 CACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTC 118966 | ||| || | || || |||| ||||| || || || |||||||| || || Sbjct 296870 -TTAATGGTCTTACCACGACCTTCTTTTTCGTAGCGGGTATATAGAGCTTCAAAATCGTC 296812 Query 118967 ACC--CACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCA 119024 ||| || | | || ||| || || || ||| |||| | || ||| ||| Sbjct 296811 ACCGTAACAGTCGCTTAGA--CCGGGAGCTGCTGTTGGAGAGAACAAAGTCCAAGTCCCA 296754 Query 119025 CCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGA 119084 || || || || |||||||| || || || ||||| || || | || | ||| | Sbjct 296753 TTTTCTTCGACACGTTTCATGAAAAGATCAGGAATCCACAGAGCAGGAAACAAATCTCTT 296694 Query 119085 CAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCG 119144 ||| |||||| | || || || | | || | ||| || | |||||| || Sbjct 296693 GCACGAATTTCTTCTTTACCGTGGTTCTTTCTGATATCAATAAAATCAAAGATATCAGCA 296634 Query 119145 TGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTACGACGACCAGCCTGGTTTAC 119200 ||||| ||||||||||||| || | | ||| ||| | |||| |||||| || Sbjct 296633 TGCCATGGTTCCAGGTACAGAGCAAAGGCACCAGGTCTTTTG-TTACCACCCTGGTCGAC 296575 Query 119201 ATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATT 119260 ||| | || || ||||| ||||||| ||| ||||| | || | || ||||| Sbjct 296574 ATAACGGGCGGTATTATTAAAAACACGAATCATGGGAATTAACCCGTTAGAAGTACCATT 296515 Query 119261 TGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCC 119320 ||| || ||| ||| | | | | | | || || || | ||||||||| || Sbjct 296514 TGTACCAGCAATGTAAGAACCAGTTGAACGAATGTTATGAATATGTAGACCAATACCACC 296455 Query 119321 TGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTC 119380 || || || || || || || | | | || |||| || || ||||| ||||| Sbjct 296454 AGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTGTCGTAAATACCCTCGATAGAGTC 296395 Query 119381 ACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAA 119440 |||| | |||| | ||| || ||||||||||| | || |||||||| || || Sbjct 296394 CTCCTTCATGGCGACCAAGAAACAAGAGGACATTTGAGGTTTTGGAGTACCAGCATTAAA 296335 Query 119441 GAGAGTTGG 119449 | |||||| Sbjct 296334 CAAAGTTGG 296326 >seq2 Length=801843 Score = 104 bits (114), Expect = 3e-17 Identities = 119/160 (74%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 167948 CTACGGTCGCGTGGCGCCAAGATCTGGACTCGCTGTGAAGAGTGGTATCCAAGTTGGTGC 168007 |||||||||| | ||||||||||| || || || || || | ||||| ||| ||||| Sbjct 714643 CTACGGTCGCATTGCGCCAAGATCAGGCCTAGCAGTAAAAAACGGTATTCAAACCGGTGC 714702 Query 168008 GGGTGTTGTTGATCCAGACTATACGGGTGAAGTCAAAGTCGTTCTCTTCAATCACGGGCA 168067 |||||||| || ||| || || |||||||| ||||| || | ||||||||| || Sbjct 714703 TGGTGTTGTCGACAGAGATTACACTGGTGAAGTTAAAGTAGTCTTATTCAATCACTCACA 714762 Query 168068 CACAGATTTCCAAATCAAAAAGGGGGATCGCATCGCGCAA 168107 | ||||||| ||||| || || |||||| | || ||| Sbjct 714763 GAGAGATTTCGCCATCAAGAAAGGTGATCGCGTAGCCCAA 714802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435068582520