Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03- 21] 17 sequences; 11,929,789 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq5 217 2e-51 seq9 122 1e-22 >seq5 Length=1007496 Score = 217 bits (240), Expect = 2e-51 Identities = 836/1296 (65%), Gaps = 44/1296 (3%) Strand=Plus/Plus Query 104330 CCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCC 104389 ||||| | || ||||||||||| |||| ||| ||||||||| ||| ||| | ||||| Sbjct 296326 CCAACTTTGTTTAATGCTGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTGGTCGCC 296385 Query 104390 AACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCA 104449 | ||||||||||| ||| | ||||| || | ||| | | || ||||| || || Sbjct 296386 ATGAAGGAGGACTCTATCGAGGGTATTTACGACACTTTGAAAGAATGTGCTTTGATTTCC 296445 Query 104450 AAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATT 104509 || ||||| |||||||| | || || ||| | | | | | | ||| ||| Sbjct 296446 AAAACTGCTGGTGGTATTGGTCTACATATTCATAACATTCGTTCAACTGGTTCTTACATT 296505 Query 104510 CGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACA 104569 || ||||||||| || | || | ||||| ||| |||| || ||||| || Sbjct 296506 GCTGGTACAAATGGTACTTCTAACGGGTTAATTCCCATGATTCGTGTTTTTAATAATACC 296565 Query 104570 GCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGA 104625 || || ||||| | || | | || | |||| || | | || | || || || Sbjct 296566 GCCCGTTATGTCGACCAGGGT-GGTAACAAAAGACCTGGTGCCTTTGCTCTGTACCTGGA 296624 Query 104626 GCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGA 104685 |||||||| || |||||| | || || |||| | | ||||| ||| | || || Sbjct 296625 ACCATGGCATGCTGATATCTTTGATTTTATTGATATCAGAAAGAACCACGGTAAAGAAGA 296684 Query 104686 GGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAG 104744 | |||| | ||| | || | ||||| |||||||| ||||| |||||||| | | Sbjct 296685 AATTC-GTGCAAGAGATTTGTTTCCTGCTCTGTGGATTCCTGATCTTTTCATGAAACGTG 296743 Query 104745 TTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACA-AGGCACCTGGTCTCTCCGAT 104803 | || || | ||| | |||| || | || | |||| ||| || || ||||| ||| Sbjct 296744 TCGAAGAAAATGGGACTTGGACTTTGTTCTCTCCA-ACAGCAGCTCCCGGTCTAAGCGA- 296801 Query 104804 GCCGT--GGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGA 104861 | || ||||| || |||||||| || || || ||||| |||||||||| | Sbjct 296802 -CTGTTACGGTGACGATTTTGAAGCTCTATATACCCGCTACGAAAAAGAAGGTCGTG--- 296857 Query 104862 CTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTG 104921 | ||| | |||| | | ||| | | ||| | | | ||||| || |||| Sbjct 296858 GTAAGACCATTAAAGCTCAAAAATTATGGTATTCCATTTTGGAAGCACAAACTGAAACTG 296917 Query 104922 GTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGG 104981 ||||||| | || |||| || || || || ||| |||| ||| ||||| || |||| Sbjct 296918 GTACACCTTTTGTGGTTTATAAGGATGCTTGCAACAGAAAGTCTAACCAAAAAAACTTGG 296977 Query 104982 GTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGA 105041 |||| |||||| || || | || ||||| | || | ||| || || | Sbjct 296978 GTGTTATCAAGTCATCGAACTTATGCTGTGAAATTGTTGAGTACTCAGCTCCGGACGAAA 297037 Query 105042 CGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGT--ATGTGGATC--CAGA---- 105093 | ||||| |||||| | || || | || | || || || || | | |||| Sbjct 297038 CTGCTGTTTGTAACTTGGCTTCCGTTGCCTTGCCAGCGTTCAT-TGAAACGTCAGAGGAC 297096 Query 105094 -GACAAA----GACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAA 105148 | |||| || | | | ||||| | |||||| || | ||| ||| || Sbjct 297097 GGCCAAACTTCTACTTACAACTTCAAAAAATTACACGAAATTGCCAAAGTTGTTACTCGT 297156 Query 105149 AACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAAT 105208 || ||||||||||||||||| | |||| |||||| |||| || | | ||| ||| Sbjct 297157 AATTTAAACAGAGTTATTGATCGTAATTACTACCCCATTGAAGAAGCGAGAAGATCCAAT 297216 Query 105209 ATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCA-TTCTTTG 105267 |||||||| | ||||||| | |||||||| ||| | || || || || | || Sbjct 297217 ATGAGACATAGGCCAATTGCCTTGGGTGTTCAAGGTTTGGCTGA------CACTTTTATG 297270 Query 105268 TCGCCACG-----CATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAG 105322 | || ||| | |||||||| || || || | | ||| | || ||||| Sbjct 297271 TTGCTACGTTTACCCTTTGATTCTGAAGAGGCCCGTTTACTAAATATCCAAATCTTTGAA 297330 Query 105323 ACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATAT 105382 || || ||||| ||| | | || || || || || || | || || ||||| Sbjct 297331 ACAATTTATCATGCCTCCATGGAAGCTTCTTGTGAATTAGCTCAAAAGGACGGCCCATAC 297390 Query 105383 GAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGT 105442 |||||||| | |||||||||||||| ||||| | ||||| || |||||||||| | Sbjct 297391 GAAACCTTCCAAGGTTCTCCAGCTTCTCAAGGTATACTTCAGTTCGATATGTGGG-ACCA 297449 Query 105443 GAGACCAAGCTTCA-CTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCT 105501 | ||| | || | || ||||| || | | | || ||| | | | ||| | Sbjct 297450 AAAACCCTACGGCATGTGGGATTGGGACACTTTGAGGAAAGATGTCATGAAACATGGTAT 297509 Query 105502 TCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAA 105561 | | ||| | | |||||| |||||||| || || ||||| | ||||| |||||| | Sbjct 297510 TAGAAACTCTTTGACCATGGCACCAATGCCTACTGCATCCACATCCCAAATATTGGGTTA 297569 Query 105562 TAATGAATGCTTTGAACCCTACACGACGAACATCTA 105597 ||||||||| |||||||| ||| | ||||| || Sbjct 297570 TAATGAATGTTTTGAACCAGTCACCTCTAACATGTA 297605 >seq9 Length=439147 Score = 122 bits (134), Expect = 1e-22 Identities = 877/1392 (63%), Gaps = 56/1392 (4%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 |||||| || || | ||||| ||||| | ||||| || || || || || ||||| Sbjct 235862 CCACAGCACTTGGTTATGCGTGTGGCGCTGGGTATCCACGGTAGTGATATCGAGTCTGTG 235803 Query 104282 TTGGAGACATACGACAAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 || |||| ||| | |||||| ||| ||| |||| |||||| | |||||| | || Sbjct 235802 CTGAAGACCTACAATTTGATGTCGTTAAGATAT-TTCACTCACGCTTCCCCAACCTTATT 235744 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 ||| |||||||| ||| ||||||||||| || ||||| || |||| ||||| || Sbjct 235743 CAACGCTGGTACTCCACATCCCCAAATGTCTTCATGTTTCCTAATTGCCATGAAGGATGA 235684 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 ||| || | || || |||| ||| | | || ||||| || || ||| || || Sbjct 235683 CTCTATTGAAGGCATTTATGATACTTTGAAAGAATGTGCTATGATTTCTAAGACTGCAGG 235624 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520 ||| |||| | || || | | | | ||| ||| ||| || || || Sbjct 235623 TGGTGTTGGTCTTCATATTAACAACATCCGTTCCACAGGTTCTTATATCGCCGGTACTAA 235564 Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580 ||| || |||| | ||||| ||| |||| || || ||| || || || ||||| Sbjct 235563 CGGTACTTCGAATGGGTTGATTCCTATGATTCGTGTTTTCAACAATACTGCTCGTTATGT 235504 Query 104581 AAATCAAGCTGGGCGTCGAAAGGGATCTATCGC-----AGTCTATCTT-GAGCCATGGCA 104634 | ||| || || ||| || || || | | |||| || |||||||| Sbjct 235503 GGACCAA---GGAGGTAACAAGAGACCTGGTGCCTTTGCGCTTTTCTTGGAACCATGGCA 235447 Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTG 104694 || |||||| | || || | || | | | ||| ||| | || || | ||| Sbjct 235446 TGCAGATATCTTCGACTTTGTCGATATTAGAAAAACCCATGGTAAAGAAGA-AATCCGTG 235388 Query 104695 C-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 | | ||| | ||| | ||||| |||||||| || || || ||||| | ||| | ||| Sbjct 235387 CAAGGGATTTGTTCCCTGCTCTGTGGATTCCTGACCTTTTTATGAAACGTGTTCAAGAGG 235328 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTG 104813 ||| ||| || | |||| ||| || || ||| | |||| | ||||| Sbjct 235327 ATGGGCCCTGGACTTTATTTTCTCCCAGTGCTGCCCCAGGTTTAGATGATGTCTGGGGTG 235268 Query 104814 AGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGC 104873 | || ||||||| || || || ||||| |||||||| | | || | Sbjct 235267 ATGAATTTGAAGAGCTATATACCCGTTACGAAAGGGAAGGTCGTG---GTAAAACCATTA 235211 Query 104874 CAGCTGCCGATGTGTGGAAAGCTAT-TCTCAAGTCTCAAACCGAGACTGGTACACCATAC 104932 ||| | | ||| | || || | |||| | ||||| || || |||||||| | | Sbjct 235210 AAGCCCAAAAGTTATGGTATGCAATCTTACAAG-CACAAACAGAAACAGGTACACCTTTC 235152 Query 104933 ATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAG 104992 ||| ||||||| ||| | ||||| ||||| || ||| |||| |||||| || || Sbjct 235151 ATGGTTTACAAGGACTCATGTAATAGAAAGACAAACCAACAGAACTTGGGTACCATTAAA 235092 Query 104993 AGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGT 105052 |||||| | ||| |||||| | || | | | | |||||| || || || ||| Sbjct 235091 TCATCCAATTTGTGTTGTGAAATCGTCGAGTATTCTTCCCCAGATGAAACTGCCGTTTGT 235032 Query 105053 AACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GAC-AAAGA--------- 105101 || || || || || |||||||| || || || || ||| | | |||| Sbjct 235031 AATCTAGCCTCTATTGCTCTCCC--AGCATTTG--TCGAGATGTCTGAAGATGGTAAAAC 234976 Query 105102 --CA---TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAA 105156 || | | ||| || | | || ||| || | ||| | ||| | ||| | || Sbjct 234975 TGCAAGTTATAATTTCGAGAGTTTACATGAAATTGCCAAAGTCATTACCCATAACTTGAA 234916 Query 105157 CAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACA 105216 |||||| || ||| | |||| ||| || ||| || | || || ||||||| || Sbjct 234915 CAGAGTCATCGATCGTAATTATTATCCAGTTCCTGAAGCCAGAAATTCAAATATGAAGCA 234856 Query 105217 CCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGC 105276 | || |||| | |||||||| ||||| || ||| | || | | || | | Sbjct 234855 TAGACCTATTGCCTTGGGTGTTCAAGGTCTGGCCGATACCTATATGATGTTGCGTCTACC 234796 Query 105277 ATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGC 105336 ||||| || | ||||| | | || | || || || ||||| ||||| || Sbjct 234795 CTTTGAATCTAAAGAAGCTCAAACTTTGAACAAACAGATTTTCGAAACCATCTATCATGC 234736 Query 105337 CGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGG 105396 ||||||| || | || |||||| | || ||| ||| || || || || Sbjct 234735 TACTCTTGAAGCCTCCTGTGAATTGGCACAAAAGGAAGGTAAGTATTCCACTTTCGAAGG 234676 Query 105397 TTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCA 105456 ||||||||| || | || | || |||||||| |||||| | | | || ||| || Sbjct 234675 TTCTCCAGCCTCTAAGGGTATTCTACAATTTGACATGTGGAATGCTAAG-CCA---TTTG 234620 Query 105457 CTA----CGACTGGGAAGCTCTCAAGGAACG-CA---TCAAGGAGAAGGGTCTTCGTAAC 105508 || || |||| || || ||| || | || |||| | | || | | | ||| Sbjct 234619 GTATGTGGGATTGGG-AGACCTTAAGAAAGGACATTGTCAA--ACATGGAT-TAAGAAAC 234564 Query 105509 AGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAA-TCTTGGGTAATAATGA 105567 | | ||||| ||||||||||| ||||| || | |||| |||||||| |||| || Sbjct 234563 TCTTTGACAATGGCGCCAATGCCAACTGCCTCGACTTCTCAAATTCTTGGGT-ATAACGA 234505 Query 105568 ATGCTTTGAACC 105579 ||| |||||||| Sbjct 234504 ATGTTTTGAACC 234493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260676057080