Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03- 21] 17 sequences; 11,929,789 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq12 150 2e-31 seq9 116 4e-21 seq11 104 3e-17 >seq12 Length=1041178 Score = 150 bits (166), Expect = 2e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| |||||||| || || |||||||| || || ||||| || || Sbjct 74478 ATGCAGATCTTTGTTAAGACGCTGACTGGTAAGACTATAACCCTCGAGGTCGAATCTTCC 74419 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||| | |||||||||||||| || || |||||||| ||||| Sbjct 74418 GACACGATCGACAACGTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCGGACCAA 74359 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | |||||||| ||||||||||| || |||| | | ||| | | ||||| ||| Sbjct 74358 CAGAGGTTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACCTTGTCCGACTACAAT 74299 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 | |||||||| || ||||| || |||||||| Sbjct 74298 ATTCAAAAGGAGTCTACTCTCCACTTAGTCTTG 74266 Score = 149 bits (164), Expect = 7e-31 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || |||||||| ||||||||||| | ||||| || || || || | || || || || Sbjct 74709 ATTATGCAAATTTTTGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTCGAATCT 74650 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 ||||| ||||| || | ||| | |||||||||||||| || || |||||||| ||| Sbjct 74649 TCTGATACCATTGATAACGTCAAGTCAAAAATTCAGGACAAAGAAGGTATTCCTCCGGAC 74590 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 || ||| | | |||||||| ||||||||||| || |||| | | ||| | | ||||| Sbjct 74589 CAACAGAGGTTGATTTTTGCCGGTAAGCAACTGGAAGATGGTAGAACCTTGTCCGACTAC 74530 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTT 27617 || |||||||||| |||||| | ||| |||| || Sbjct 74529 AACATCCAAAAGGAGTCCACTTTACATTTAGTATT 74495 Score = 140 bits (154), Expect = 4e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| ||||| || || || ||||| || || || |||||||| || Sbjct 74022 ATGCAAATTTTTGTTAAGACACTGACGGGTAAGACCATAACCCTCGAGGTTGAATCGTCC 73963 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || ||||| || |||||||| ||||| || |||||||| ||||| Sbjct 73962 GACACTATTGATAACGTGAAGAGCAAGATTCAGGATAAGGAAGGTATTCCTCCGGACCAA 73903 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | |||||||| ||||||||||| || |||| | || || | ||||| || Sbjct 73902 CAGAGATTGATTTTTGCCGGTAAGCAACTGGAAGATGGCAGGACGTTATCCGACTACAAC 73843 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTT 27617 | ||||||||||| ||||| || || ||||| Sbjct 73842 ATTCAAAAGGAATCTACTCTCCACCTGGTCTT 73811 Score = 127 bits (140), Expect = 2e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || |||||||| | ||||| ||||||||||| || || ||||| || | Sbjct 481273 ATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTAGAAGTTGAATCTTCT 481332 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| ||| | ||| | || || || |||||||| || || || || ||||| Sbjct 481333 GACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAA 481392 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | || ||||||||||||||| | || |||| | || | | ||||| || Sbjct 481393 CAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGCAGAACTTTGTCTGACTACAAC 481452 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 ||||||||||||||||| | || | |||||| Sbjct 481453 ATCCAAAAGGAATCCACTTTGCACTTGGTCTTG 481485 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| |||||||| || || || || || ||||| || || |||||||| || Sbjct 74250 ATGCAAATTTTTGTCAAAACTCTAACTGGTAAAACTATAACCCTAGAGGTTGAATCTTCC 74191 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || | || ||| || || ||||| ||||| || || ||||| || Sbjct 74190 GACACTATTGACAACGTCAAAAGTAAGATCCAAGACAAAGAGGGTATCCCACCAGATCAA 74131 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | || |||||||||||||||||||| || || | | | || || | || ||||| Sbjct 74130 CAAAGACTTATTTTTGCTGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 74071 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614 | || || ||||| ||| | ||| |||| Sbjct 74070 ATTCAGAAAGAATCTACTTTGCATTTAGT 74042 >seq9 Length=439147 Score = 116 bits (128), Expect = 4e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 ||||||||||| | || || ||||| || ||| | || ||||| || ||| | ||| Sbjct 64477 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 64536 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | ||| | ||| | || ||||| |||||||| || || || || ||||| || | | Sbjct 64537 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 64596 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || ||||||||||||||| | || || | | | ||| | | |||||||| | ||||| Sbjct 64597 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTATAACATTCAAAAA 64656 Query 27595 GAATCCACTCTTCATCTAGTCTTG 27618 ||||||||| | || |||||||| Sbjct 64657 GAATCCACTTTACACTTAGTCTTG 64680 >seq11 Length=681961 Score = 104 bits (114), Expect = 3e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 27414 CTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCAT 27473 ||| || ||||| | || || ||||| || ||| | || ||||| || ||| | ||| Sbjct 633035 CTTCGTTAAGACTTTGACTGGTAAGACCATCACTTTAGAAGTTGAATCTTCTGACACCAT 632976 Query 27474 TGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCT 27533 || ||| | ||| | || || || |||||||| || || || || ||||| || | | Sbjct 632975 TGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 632916 Query 27534 AATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAA 27593 || ||||| ||||||||| | || || | | | || || | ||||| || ||||||| Sbjct 632915 GATCTTTGCCGGTAAGCAATTGGAAGACGGTAGAACTTTATCTGACTACAACATCCAAAA 632856 Query 27594 GGAATCCACTCTTCATCTAGTCTTG 27618 |||||||||| | ||| | || ||| Sbjct 632855 GGAATCCACTTTACATTTGGTTTTG 632831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310278809040