Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03-
21] 17 sequences; 11,929,789 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq12 125 4e-24
seq11 91.5 9e-14
seq9 84.2 1e-11
>seq12
Length=1041178
Score = 125 bits (138), Expect = 4e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| || | || || ||||| | |||| ||||||||| ||||| || || ||
Sbjct 74480 CCACCTCTTAGTCTTAATACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGAC 74539
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| |||| | ||||| ||||| ||||||||||| || || | |||||||||||| ||
Sbjct 74540 AAGGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGA 74599
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658
| || || ||||| ||| ||||| || ||| || ||| || || || ||
Sbjct 74600 ATACCTTCTTTGTC-CTGAATTTTTGACTTGACGTTATCAATGGTATCAGAAGATTCGAC 74658
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||| ||||| ||||||||||| || || || |||||||| |||||
Sbjct 74659 TTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCAT 74706
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | || ||| ||||| | ||| || || |||||||||||||| ||
Sbjct 74024 CCACCTCTTAATCTCAGCACTAAATGCAAAGTAGATTCTTTCTGAATGTTATAATCAGAC 74083
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| |||| ||||||| ||||| ||||| ||||| || | | ||||| || || ||
Sbjct 74084 AGCGTTCTACCGTCTTCCAGTTGCTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGG 74143
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||||| |||||| |||| || |||| ||| | ||| ||||| || ||
Sbjct 74144 ATACCCTCTTTGTCTTGGATC-TTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAAC 74202
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | |||||| |||||||| |||| ||||| |||||||| |||||
Sbjct 74203 CTCTAGGGTTATAGTTTTACCAGTTAGAGTTTTGACAAAAATTTGCAT 74250
Score = 107 bits (118), Expect = 1e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| || || |||||||| |||||||||||| || || || ||
Sbjct 74252 CCACCTCTCAATCTCAAGACTAAGTGGAGAGTAGACTCCTTTTGAATATTGTAGTCGGAC 74311
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| |||| | ||||| ||||| ||||||||||| || || | |||||||||||| ||
Sbjct 74312 AAGGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGA 74371
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| || || ||||| ||| ||||| || ||| | || ||||| || ||
Sbjct 74372 ATACCTTCTTTGTC-CTGAATTTTTGACTTGACGTTGTCGATCGTGTCGGAAGATTCGAC 74430
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | |||||| || ||||| || | ||| || ||||| ||||||||
Sbjct 74431 CTCGAGGGTTATAGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCAT 74478
Score = 96.9 bits (106), Expect = 2e-15
Identities = 153/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 34495 AACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCT 34554
|| |||| |||||||| |||||||||||||| || || || | || | | |||
Sbjct 73811 AAGACCAGGTGGAGAGTAGATTCCTTTTGAATGTTGTAGTCGGATAACGTCCTGCCATCT 73870
Query 34555 TCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCT 34614
|| ||||| ||||||||||| || || | |||||||||||| || | || ||||| ||
Sbjct 73871 TCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCCGGAGGAATACCTTCCTTATC- 73929
Query 34615 GTGATCTTTTGTTTTAACGATA-AAATTGTGTC-TTCGCTCTCCACTTCCACGGTTATCG 34672
||| || | || ||| || ||| ||||| || | || || || | |||||| |
Sbjct 73930 CTGAATCTTGCTCTTCACGTTATCAATAGTGTCGGACGAT-TCAACCTCGAGGGTTATGG 73988
Query 34673 TTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| ||||| || | || || |||||||| |||||
Sbjct 73989 TCTTACCCGTCAGTGTCTTAACAAAAATTTGCAT 74022
Score = 96.9 bits (106), Expect = 2e-15
Identities = 162/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| ||||| || | |||| |||||||| ||||| || || ||
Sbjct 481499 CCACCTCTCAATCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAC 481440
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| |||| | ||||| | ||| ||||| ||||| || || | |||||||| || ||
Sbjct 481439 AAAGTTCTGCCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 481380
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658
| || ||||||||| |||||| | || || | ||| ||||| || ||
Sbjct 481379 ATACCTTCCTTGTCTTGGATCTTG-GACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 481321
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710
||| | ||| || || ||||||||||| || || || ||||| ||||| |||
Sbjct 481320 TTCTAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTTG 481269
>seq11
Length=681961
Score = 91.5 bits (100), Expect = 9e-14
Identities = 106/143 (74%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| |||||||| | |||| |||||||| ||||| || || ||
Sbjct 632817 CCACCTCTTAATCTCAAAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 632876
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| |||| ||||||| | ||| ||||||||||| || || | |||||||| || ||
Sbjct 632877 AAAGTTCTACCGTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCAGGTGGG 632936
Query 34600 ACTCCCTCCTTGTCTGTGATCTT 34622
| || ||||||||| ||||||
Sbjct 632937 ATACCTTCCTTGTCTTGGATCTT 632959
>seq9
Length=439147
Score = 84.2 bits (92), Expect = 1e-11
Identities = 152/220 (69%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| || || || | |||| || |||||||||||||| || ||
Sbjct 64694 CCACCTCTCAATCTCAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTATAGTCAGAC 64635
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| |||| ||||||| | ||| ||||| ||||| || || | |||||||| || ||
Sbjct 64634 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 64575
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| || ||||||||| ||| |||| || || | ||| ||||| || ||
Sbjct 64574 ATACCTTCCTTGTCT-TGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 64516
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAA 34698
||||| || || || ||||| || || || || ||||||
Sbjct 64515 TTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACAAAA 64476
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729534791961
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |