Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03-
21] 17 sequences; 11,929,789 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq12 158 3e-33
seq9 143 6e-29
seq11 129 1e-24
>seq12
Length=1041178
Score = 158 bits (174), Expect = 3e-33
Identities = 164/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 210900 CTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCA 210959
|||| ||| ||||| ||||| || || ||||| ||||| || || | | ||||| |||
Sbjct 73808 CTTAAGACCAGGTGGAGAGTAGATTCCTTTTGAATGTTGTAGTCGGATAACGTCCTGCCA 73867
Query 210960 TCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTG 211019
|||||||| ||||| || || || || | | |||||||| ||||||| ||||||||
Sbjct 73868 TCTTCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCCGGAGGAATACCTTCCTTA 73927
Query 211020 TCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATC 211079
||||| ||||| |||||||| || || ||||| || |||||||||||| || ||
Sbjct 73928 TCCTGAATCTTGCTCTTCACGTTATCAATAGTGTCGGACGATTCAACCTCGAGGGTTATG 73987
Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| || ||||| ||||| | |||||
Sbjct 73988 GTCTTACCCGTCAGTGTCTTAACAAAAATTTGCAT 74022
Score = 147 bits (162), Expect = 5e-30
Identities = 162/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | ||| ||||| ||||| ||||| || || || || | | ||| || ||
Sbjct 74263 TCTCAAGACTAAGTGGAGAGTAGACTCCTTTTGAATATTGTAGTCGGACAAGGTTCTACC 74322
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||||||| ||||| || || || || | | |||||||| ||||||| ||||| ||
Sbjct 74323 ATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGAATACCTTCTTT 74382
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
|||||| || ||| || ||||| ||||| ||||| || ||| |||||||| || ||
Sbjct 74383 GTCCTGAATTTTTGACTTGACGTTGTCGATCGTGTCGGAAGATTCGACCTCGAGGGTTAT 74442
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || || ||||| ||||| | ||||||
Sbjct 74443 AGTCTTACCAGTCAGCGTCTTAACAAAGATCTGCAT 74478
Score = 134 bits (148), Expect = 3e-26
Identities = 161/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | ||| | |||||| || ||||||||||| || || | | || || ||
Sbjct 481488 TCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCC 481429
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||||| ||||| || || ||||| | | |||||||||||| || | ||||||||
Sbjct 481428 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 481369
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| |||||||| || || || || || |||||||| |||||| || || || ||
Sbjct 481368 GTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAAT 481309
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
||||| || || | |||||| || || | ||||| ||
Sbjct 481308 AGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 481270
Score = 132 bits (146), Expect = 1e-25
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956
||||||| || | || | ||||||||| ||||||||||| || || | | ||| ||
Sbjct 74489 AGTCTTAATACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTA 74548
Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016
||||||||||| ||||| || || || || | | |||||||| ||||||| |||||
Sbjct 74549 CCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGAATACCTTCT 74608
Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076
|||||||| || ||| || ||||| || ||||| ||||| ||| || || | ||
Sbjct 74609 TTGTCCTGAATTTTTGACTTGACGTTATCAATGGTATCAGAAGATTCGACTTCCAATGTT 74668
Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || || | |||||| ||||| | |||||
Sbjct 74669 ATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCAT 74706
Score = 129 bits (142), Expect = 1e-24
Identities = 158/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| || || | || | ||| || ||||| || ||||||||||| | || || || ||
Sbjct 74035 TCTCAGCACTAAATGCAAAGTAGATTCTTTCTGAATGTTATAATCAGACAGCGTTCTACC 74094
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
|||||||| ||||| || || || ||||| | |||||| || || || | || || ||
Sbjct 74095 GTCTTCCAGTTGCTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGGATACCCTCTTT 74154
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| |||||||| ||| ||||| || || ||||| || ||||||||| || || ||
Sbjct 74155 GTCTTGGATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTAT 74214
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || ||||| || ||||| | |||||
Sbjct 74215 AGTTTTACCAGTTAGAGTTTTGACAAAAATTTGCAT 74250
>seq9
Length=439147
Score = 143 bits (158), Expect = 6e-29
Identities = 156/207 (75%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | ||| | |||||| |||||||| |||||||| || | | ||| || ||
Sbjct 64683 TCTCAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTATAGTCAGACAAGGTTCTACC 64624
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||||| ||||| || || ||||| | | |||||||||||| || | ||||||||
Sbjct 64623 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 64564
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| || |||||| || || || || || |||||||| |||||| || | ||||||
Sbjct 64563 GTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 64504
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAA 211105
||||| || || | |||||| |||||
Sbjct 64503 GGTCTTACCAGTCAAAGTCTTGACAAA 64477
>seq11
Length=681961
Score = 129 bits (142), Expect = 1e-24
Identities = 142/189 (75%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 210917 AGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976
|||||| || ||||||||||| || || | | || || || ||||||| ||||| ||
Sbjct 632846 AGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTCTTCCAATTGCTTACC 632905
Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036
|| ||||| | | |||||||||||| || | ||||||||||| |||||||| ||
Sbjct 632906 GGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGGATCTTGGACTT 632965
Query 211037 CACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGT 211096
|| || || ||||||||||| |||||| || | |||||| ||||| || || | |||
Sbjct 632966 GACATTGTCAATGGTGTCAGAAGATTCAACTTCTAAAGTGATGGTCTTACCAGTCAAAGT 633025
Query 211097 CTTTACAAA 211105
||| || ||
Sbjct 633026 CTTAACGAA 633034
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151747522205
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |