Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03-
21] 17 sequences; 11,929,789 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq12 170 5e-37
seq11 158 3e-33
seq9 156 1e-32
seq17 96.9 8e-15
seq2 91.5 4e-13
>seq12
Length=1041178
Score = 170 bits (188), Expect = 5e-37
Identities = 169/219 (77%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||| | ||||||||| ||||||| ||||| || | ||||||||| ||
Sbjct 481488 TCTCAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCC 481429
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| | ||||| ||||| ||||| | || ||||||||| || || |||||||||||
Sbjct 481428 ATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 481369
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||||||| ||| ||| || || ||||| || | ||| || |||| || ||
Sbjct 481368 GTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAAT 481309
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| || || ||||| || | ||| | |||||| ||
Sbjct 481308 AGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 481270
Score = 131 bits (144), Expect = 4e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 225504 GACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTC 225563
||| ||||||||||| ||||| ||||| | ||||| |||| || || || ||||||||
Sbjct 73813 GACCAGGTGGAGAGTAGATTCCTTTTGAATGTTGTAGTCGGATAACGTCCTGCCATCTTC 73872
Query 225564 TAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTG 225623
|| ||||| || || || || | || |||||||| || |||||||||||||| || ||
Sbjct 73873 CAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCCGGAGGAATACCTTCCTTATCCTG 73932
Query 225624 GATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTT 225683
||||| |||||| || || ||||| || | ||| || || | || || |||||
Sbjct 73933 AATCTTGCTCTTCACGTTATCAATAGTGTCGGACGATTCAACCTCGAGGGTTATGGTCTT 73992
Query 225684 GCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||||| || || | || | ||||||
Sbjct 73993 ACCCGTCAGTGTCTTAACAAAAATTTGCAT 74022
Score = 129 bits (142), Expect = 1e-24
Identities = 145/194 (75%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||||||||| || || ||||| | |||||| |||| ||| ||||| ||
Sbjct 74263 TCTCAAGACTAAGTGGAGAGTAGACTCCTTTTGAATATTGTAGTCGGACAAGGTTCTACC 74322
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| || ||||| || || || || | | |||||||| || ||||||||||| ||
Sbjct 74323 ATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGAATACCTTCTTT 74382
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
||| || || ||| ||| || ||||| ||||| || | ||| || || | || ||
Sbjct 74383 GTCCTGAATTTTTGACTTGACGTTGTCGATCGTGTCGGAAGATTCGACCTCGAGGGTTAT 74442
Query 225678 CGTCTTGCCCGTCA 225691
||||| || ||||
Sbjct 74443 AGTCTTACCAGTCA 74456
Score = 123 bits (136), Expect = 6e-23
Identities = 146/198 (74%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 225516 AGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCC 225575
|||||| || ||||||| ||||| |||| ||| ||||| |||||||| || ||||| ||
Sbjct 74509 AGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTTCTACCATCTTCCAGTTGCTTACC 74568
Query 225576 AGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTT 225635
|| || || | | |||||||| || ||||||||||| ||||| || || ||| |||
Sbjct 74569 GGCAAAAATCAACCTCTGTTGGTCCGGAGGAATACCTTCTTTGTCCTGAATTTTTGACTT 74628
Query 225636 CACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGT 225695
|| || ||||| || || | ||| || || || || || || || || ||||||||
Sbjct 74629 GACGTTATCAATGGTATCAGAAGATTCGACTTCCAATGTTATGGTTTTACCGGTCAAAGT 74688
Query 225696 TTTTATGAACACTTGCAT 225713
|| | || | ||||||
Sbjct 74689 CTTGACAAAAATTTGCAT 74706
Score = 120 bits (132), Expect = 7e-22
Identities = 156/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
|||||| || | || | ||| |||||||| || | || ||||| | || ||||| ||
Sbjct 74035 TCTCAGCACTAAATGCAAAGTAGATTCTTTCTGAATGTTATAATCAGACAGCGTTCTACC 74094
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||| || ||||| ||||| || ||||||| |||||| || || || ||||| || ||
Sbjct 74095 GTCTTCCAGTTGCTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGGATACCCTCTTT 74154
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||||||| || || || || ||||| || | ||| || |||| || ||
Sbjct 74155 GTCTTGGATCTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTAT 74214
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || || | |||||| | || | ||||||
Sbjct 74215 AGTTTTACCAGTTAGAGTTTTGACAAAAATTTGCAT 74250
>seq11
Length=681961
Score = 158 bits (174), Expect = 3e-33
Identities = 159/207 (77%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | || | ||||||||| ||||||| ||||| || | |||||||| ||
Sbjct 632828 TCTCAAAACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACC 632887
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||| | ||||| || || ||||| | || ||||||||| || || |||||||||||
Sbjct 632888 GTCTTCCAATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 632947
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||||||| ||| ||| || |||||||| || | ||| || ||||| |||||
Sbjct 632948 GTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAAAGTGAT 633007
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAA 225704
||||| || |||||||| || | |||
Sbjct 633008 GGTCTTACCAGTCAAAGTCTTAACGAA 633034
>seq9
Length=439147
Score = 156 bits (172), Expect = 1e-32
Identities = 155/201 (77%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | ||| | ||||||||||||||| | || || || | ||| ||||| ||
Sbjct 64683 TCTCAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTATAGTCAGACAAGGTTCTACC 64624
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||| | ||||| ||||| ||||| | || ||||||||| || || |||||||||||
Sbjct 64623 GTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTT 64564
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||| |||||| ||| ||| || || ||||| || | ||| || || || |||||
Sbjct 64563 GTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGAT 64504
Query 225678 CGTCTTGCCCGTCAAAGTTTT 225698
||||| || |||||||| ||
Sbjct 64503 GGTCTTACCAGTCAAAGTCTT 64483
>seq17
Length=73171
Score = 96.9 bits (106), Expect = 8e-15
Identities = 189/274 (69%), Gaps = 4/274 (1%)
Strand=Plus/Plus
Query 7444 TTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATTATA 7503
|||||||| || || | | ||| |||||| ||| || | | ||| | || ||
Sbjct 64684 TTATATTTTATGTTAGCTATTTTTAGTGGTATGGCAGGAACAGCAATGTCTTTAATCATT 64743
Query 7504 AGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGT-GGTAATAGCCAACTTTACAA 7562
|| |||||||||||||| || ||||| ||| |||| | || ||| ||| | | ||
Sbjct 64744 AGATTAGAATTAGCTGCACCTGGTTCACAA-TATTTACAAGGGAATGCTCAATTATTTAA 64802
Query 7563 CGTTATTATTACGGCG-CATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGA 7621
||| ||| || | ||||| | | || |||||||| || || ||||| | | | |
Sbjct 64803 TGTT-TTAGTAGTTGGTCATGCTGTATTAATAATTTTCTTCTTAGTAATGCCAGCTTTAA 64861
Query 7622 TAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTC 7681
| || ||||| || |||| || | || |||||||||||||| | |||| || ||||
Sbjct 64862 TTGGGGGTTTTGGTAATTATTTATTACCCTTAATGATTGGTGCAACAGATACAGCATTTC 64921
Query 7682 CAAGGCTTAACAATATAAGTTTTTGATTACTACC 7715
|||| |||| ||||| |||||| || ||||
Sbjct 64922 CAAGAATTAATAATATTGCATTTTGAGTATTACC 64955
>seq2
Length=801843
Score = 91.5 bits (100), Expect = 4e-13
Identities = 80/100 (80%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| ||||| ||||||||||| || || ||||| || || ||||||||||| ||||||||
Sbjct 34998 GAAAATTTGCCCATCAGTAATGGAAATGACATTGGTTGGAATATAAGCAGAGACATCACC 34939
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCA 4569
|||| ||||| | ||| || ||||| |||| || |||
Sbjct 34938 ACCTTGGGTTTCAATAACGGGCAAGGCAGTTAAAGAACCA 34899
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192530940251798
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |