Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03- 21] 17 sequences; 11,929,789 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq10 206 2e-48 >seq10 Length=750185 Score = 206 bits (228), Expect = 2e-48 Identities = 564/855 (66%), Gaps = 24/855 (3%) Strand=Plus/Minus Query 4240 TTGAACA-AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTG 4298 ||| ||| ||||||| |||||||| || || |||| |||||| ||||| || || || Sbjct 398433 TTGGACATAACACCAGCCTTTTGGTAATCAGAAACTCTCTTTTCAAAGAAGTTGGTCTTA 398374 Query 4299 CCTTCTAACGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTT-TTC 4357 || | || || || ||||||||||| || || || || | ||||| | || || Sbjct 398373 CCAGCCAAGGAGATGTTTTCCATAAAGTCGAAGGGGTTTTCGACCTTGTAGTACTTCTTG 398314 Query 4358 ACACTTTAGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTC 4417 || | ||| || | | || |||||| || || || | ||| ||| |||| || || Sbjct 398313 TTACCGAA-AGCAACCAAAAGTCTGTCAGCAACGAACTCAACATATTGGTTCATTAGGTC 398255 Query 4418 GCAGTTAATTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCT---TGTTCTAT 4474 ||| || || | || || || | |||| |||||| | | ||||| || Sbjct 398254 AGCGTTCATACCTAGCAAGGCAACTGGCAAGGCGTC---CAAAAAGTATCTTTGTTCGAT 398198 Query 4475 AGTTACGGCTTCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTA 4534 || || || |||| || | || | | || |||||| || || | Sbjct 398197 TTCCACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAATG 398138 Query 4535 TCCAAACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTT 4594 | |||||||| || ||||| || ||||||||||||||||||| ||||| |||||| Sbjct 398137 GGCGAACAATAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAAATCAATTCGTT 398078 Query 4595 AGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGA 4654 ||| || || || |||||||| | ||||||||| || | ||| || || | || || || Sbjct 398077 AGAGAAGGTCAAACCGGGCATCATACCTCTCTTCTTCAACCAGAAAATGGAAGCGAAGGA 398018 Query 4655 CCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCT 4714 || || ||||| | ||||| | | |||||| || |||| || || ||| || Sbjct 398017 ACCGGAGAAGAAGACACCTTCGATAGAGGCAAAGGCGACTAGTCTTTCACCAAACAAGGC 397958 Query 4715 GGCTTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACG---CACGGAAT 4771 | | ||||| ||||||| ||| ||||| | || |||| | || || || Sbjct 397957 GTCAGCGTCTTGAATCCATCTTAGAGCCCACTCGGC---CTTCTCACCGATTTCTGGGAT 397901 Query 4772 TGTGTATATAGCGTT---AAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTC 4828 |||| || || || || |||| ||||| | | ||||| | || || || || Sbjct 397900 GGTGTGAATGGCATTGAACAAGAATTCACTTTCCTTA---GGGTCCTTTATGTAGGTATC 397844 Query 4829 TATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAA 4888 || | || | || |||||||||| |||||||| || ||||| || || || || Sbjct 397843 GATCAATAAGGAGTAAGTTTCAGAATGAATATTTTCAATCATGATCTGGAAACCATAGAA 397784 Query 4889 GCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTAC 4948 | | || |||| | |||||||||| || | || |||| || |||||||| || || Sbjct 397783 ACTCTTTGCCTCTGGAATTTGAACTTCGGTAGAGAAGTTTTCAACCAAGTTTTCATTAAC 397724 Query 4949 TATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGG 5008 ||||||||| || || ||||| || | ||| ||| ||||| | |||| Sbjct 397723 AATACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTAGAAATAAAAAATCTCTCGTTTTC 397664 Query 5009 CTTAAGT---TTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCA 5065 || | | || ||||||| | | ||| |||| ||||||| ||||||| | ||||| Sbjct 397663 GTTCATTCTGTTGTTCCAGTCATGAATATCCTTAGACAAATCAATTTCTTCAGCGGTCCA 397604 Query 5066 AAACGACGCTTCCGC 5080 || || ||||| || Sbjct 397603 GAAAGAGGCTTCGGC 397589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049511520661