Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03-
21] 17 sequences; 11,929,789 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq11 176 9e-39
seq12 170 4e-37
seq9 159 7e-34
>seq11
Length=681961
Score = 176 bits (194), Expect = 9e-39
Identities = 159/200 (80%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| |||||| ||| ||| ||||||||||||||||||| | || | || || ||
Sbjct 632835 ACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTCTTCC 632894
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| ||| || |||||||||||||| | |||||||||| || ||||| ||||||||||||
Sbjct 632895 AATTGCTTACCGGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGG 632954
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | || || | || || ||||| |||| ||| ||||| | |||||| ||||||
Sbjct 632955 ATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAAAGTGATGGTCTTA 633014
Query 283071 CCCGTCAAAGTCTTAACGAA 283090
|| |||||||||||||||||
Sbjct 633015 CCAGTCAAAGTCTTAACGAA 633034
>seq12
Length=1041178
Score = 170 bits (188), Expect = 4e-37
Identities = 165/212 (78%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| || || ||| ||| ||||||||||||||||||| | || | |||||| ||
Sbjct 481481 ACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCATCTTCC 481422
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| ||| || || ||||||||||| | |||||||||| || ||||| ||||||||||||
Sbjct 481421 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGG 481362
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | || || | || |||||||| |||| ||| ||||| || || || ||||||
Sbjct 481361 ATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAGGGTAATAGTCTTA 481302
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| || |||||||| ||||| || ||||| ||
Sbjct 481301 CCGGTTAAAGTCTTGACGAAAATTTGCATCTT 481270
Score = 152 bits (168), Expect = 1e-31
Identities = 151/193 (78%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||| ||||||||||| | | ||| | |||||| || ||||| || ||||||||
Sbjct 73831 TTCCTTTTGAATGTTGTAGTCGGATAACGTCCTGCCATCTTCCAGTTGCTTACCGGCAAA 73890
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGG 283026
||||| | |||||||| |||||||| ||||| || || ||| ||||| || |||
Sbjct 73891 AATCAATCTCTGTTGGTCCGGAGGAATACCTTCCTTATCCTGAATC-TTGCTCTTCACGT 73949
Query 283027 TATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAA 283086
|||| |||||||| || | ||| || ||||| || || ||||||||||||| |||||||
Sbjct 73950 TATCAATAGTGTCGGACGATTCAACCTCGAGGGTTATGGTCTTACCCGTCAGTGTCTTAA 74009
Query 283087 CGAATATCTGCAT 283099
| || || |||||
Sbjct 74010 CAAAAATTTGCAT 74022
Score = 149 bits (164), Expect = 1e-30
Identities = 172/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930
|||||| | || | | ||| | |||||| ||| || ||||||||||||||||| |
Sbjct 74479 ACCACCTCTTAGTCTTAATACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGA 74538
Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990
|||| || | ||||| || ||||| || |||||||| ||||| | |||||||| |
Sbjct 74539 CAAG-GTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAG 74597
Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
||||||| || ||||| || || |||| || ||| |||| || || || |||| |||||
Sbjct 74598 GAATACCTTCTTTGTCCTGAATTTTTGACTTGACGTTATCAATGGTATCAGAAGATTCGA 74657
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|||| | || || || ||||| ||||||||||| || || || |||||
Sbjct 74658 CTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCAT 74706
Score = 116 bits (128), Expect = 8e-21
Identities = 141/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
|||||| || ||||| || |||| ||||| | || || || ||||| || || |||||
Sbjct 74059 TTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCAGCAAA 74118
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
|| | | |||||| || || |||||||| |||||||||||||| ||| ||| |
Sbjct 74119 AATAAGTCTTTGTTGATCTGGTGGGATACCCTCTTTGTCTTGGATCTTACTTTTGACGTT 74178
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
|| |||||||| |||| ||| || || || || || || ||||| || | ||| || ||
Sbjct 74179 GTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTTTTACCAGTTAGAGTTTTGAC 74238
Query 283088 GAATATCTGCAT 283099
|| || |||||
Sbjct 74239 AAAAATTTGCAT 74250
>seq9
Length=439147
Score = 159 bits (176), Expect = 7e-34
Identities = 154/195 (79%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 282897 TGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTG 282955
||||| ||| ||||||||| ||||| ||||||| |||| || | || || || | |||
Sbjct 64670 TGTAAAGTGGATTCTTTTTGAATGTTATAGTCAGACAAG-GTTCTACCGTCTTCCAATTG 64612
Query 282956 TTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015
|| || ||||||||||| | |||||||||| || ||||| ||||||||||| |||||
Sbjct 64611 CTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTT 64552
Query 283016 TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075
|| || || | || |||||||| |||| ||| ||||| | |||||| |||||||| ||
Sbjct 64551 TGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGT 64492
Query 283076 CAAAGTCTTAACGAA 283090
||||||||| || ||
Sbjct 64491 CAAAGTCTTGACAAA 64477
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046738972007118
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |