Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03- 21] 17 sequences; 11,929,789 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq12 107 2e-18 >seq12 Length=1041178 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 |||||| ||||| || |||||||| | ||| | | || || || ||||| ||||| || Sbjct 74287 CTCCTTTTGAATATTGTAGTCGGACAAGGTTCTACCATCTTCCAGTTGCTTACCGGCAAA 74346 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 |||| | ||||||||||| |||| | || |||||| ||| |||||| | ||| Sbjct 74347 AATCAACCTCTGTTGGTCCGGAGGAATACCTTCTTTGTCC-TGAATTTTTGACTTGACGT 74405 Query 41791 CGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 | | | |||||| || || ||||| | ||||| || ||||| ||||||||||| | Sbjct 74406 TGTCGATCGTGTCGGAAGATTCGACCTCGAGGGTTATAGTCTTACCAGTCAGCGTCTTAA 74465 Query 41850 CGAAAATCTGCAT 41862 | || |||||||| Sbjct 74466 CAAAGATCTGCAT 74478 Score = 104 bits (114), Expect = 2e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 41650 TAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTC 41709 ||| ||||| || || || ||||| |||||||| |||||||| | || | | || Sbjct 73810 TAAGACCAGGTGGAGAGTAGATTCCTTTTGAATGTTGTAGTCGGATAACGTCCTGCCATC 73869 Query 41710 GTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTC 41769 || || ||||| ||||| || |||| | ||||||||||| |||| | ||||| || Sbjct 73870 TTCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCCGGAGGAATACCTTCCTTATC 73929 Query 41770 CATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCG 41828 | || || |||| ||| | | ||||||| ||| || ||||| | ||||| | Sbjct 73930 CTGAATCTTGCTCTTC-ACGTTATCAATAGTGTCGGACGATTCAACCTCGAGGGTTATGG 73988 Query 41829 TTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | ||||||||||| ||||| || ||||| ||||| Sbjct 73989 TCTTACCCGTCAGTGTCTTAACAAAAATTTGCAT 74022 Score = 95.1 bits (104), Expect = 1e-14 Identities = 163/232 (70%), Gaps = 10/232 (4%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || | ||| | ||| || | ||| | ||| |||||| || ||||| |||||||| Sbjct 74480 CCACCTCTTAGTCTTAATACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGAC 74539 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 | ||| | | || || || ||||| ||||| || |||| | ||||||||||| ||| Sbjct 74540 AAGGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGA 74599 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGACA-CA---GTGTCGCTCGACT 41810 | | || |||||| ||| |||||| ||| |||| | || || || || | Sbjct 74600 ATACCTTCTTTGTCC-TGAATTTTTGACTT----GACGTTATCAATGGTATCAGAAGATT 74654 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || |||| ||||| |||||||| |||| ||||| || ||||| ||||| Sbjct 74655 CGACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCAT 74706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303901760400