Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20paradoxus_20[genbank_20GCA_5F002079175.1_202017-03-
21] 17 sequences; 11,929,789 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq12 107 2e-18
>seq12
Length=1041178
Score = 107 bits (118), Expect = 2e-18
Identities = 141/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730
|||||| ||||| || |||||||| | ||| | | || || || ||||| ||||| ||
Sbjct 74287 CTCCTTTTGAATATTGTAGTCGGACAAGGTTCTACCATCTTCCAGTTGCTTACCGGCAAA 74346
Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790
|||| | ||||||||||| |||| | || |||||| ||| |||||| | |||
Sbjct 74347 AATCAACCTCTGTTGGTCCGGAGGAATACCTTCTTTGTCC-TGAATTTTTGACTTGACGT 74405
Query 41791 CGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849
| | | |||||| || || ||||| | ||||| || ||||| ||||||||||| |
Sbjct 74406 TGTCGATCGTGTCGGAAGATTCGACCTCGAGGGTTATAGTCTTACCAGTCAGCGTCTTAA 74465
Query 41850 CGAAAATCTGCAT 41862
| || ||||||||
Sbjct 74466 CAAAGATCTGCAT 74478
Score = 104 bits (114), Expect = 2e-17
Identities = 153/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 41650 TAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTC 41709
||| ||||| || || || ||||| |||||||| |||||||| | || | | ||
Sbjct 73810 TAAGACCAGGTGGAGAGTAGATTCCTTTTGAATGTTGTAGTCGGATAACGTCCTGCCATC 73869
Query 41710 GTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTC 41769
|| || ||||| ||||| || |||| | ||||||||||| |||| | ||||| ||
Sbjct 73870 TTCCAGTTGCTTACCGGCAAAAATCAATCTCTGTTGGTCCGGAGGAATACCTTCCTTATC 73929
Query 41770 CATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCG 41828
| || || |||| ||| | | ||||||| ||| || ||||| | ||||| |
Sbjct 73930 CTGAATCTTGCTCTTC-ACGTTATCAATAGTGTCGGACGATTCAACCTCGAGGGTTATGG 73988
Query 41829 TTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
| ||||||||||| ||||| || ||||| |||||
Sbjct 73989 TCTTACCCGTCAGTGTCTTAACAAAAATTTGCAT 74022
Score = 95.1 bits (104), Expect = 1e-14
Identities = 163/232 (70%), Gaps = 10/232 (4%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || | ||| | ||| || | ||| | ||| |||||| || ||||| ||||||||
Sbjct 74480 CCACCTCTTAGTCTTAATACTAAATGTAAAGTGGACTCCTTTTGGATGTTGTAGTCGGAC 74539
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
| ||| | | || || || ||||| ||||| || |||| | ||||||||||| |||
Sbjct 74540 AAGGTTCTACCATCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGA 74599
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGACA-CA---GTGTCGCTCGACT 41810
| | || |||||| ||| |||||| ||| |||| | || || || || |
Sbjct 74600 ATACCTTCTTTGTCC-TGAATTTTTGACTT----GACGTTATCAATGGTATCAGAAGATT 74654
Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
| || |||| ||||| |||||||| |||| ||||| || ||||| |||||
Sbjct 74655 CGACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACAAAAATTTGCAT 74706
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303901760400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |