Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F000805465.1_202014- 12-19] 878 sequences; 21,919,346 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq206 163 3e-35 seq365 96.9 4e-15 >seq206 Length=37006 Score = 163 bits (180), Expect = 3e-35 Identities = 302/441 (68%), Gaps = 8/441 (2%) Strand=Plus/Minus Query 16955 AACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAA 17014 |||| || ||| || || ||| || || || |||||||||| ||| | ||||| || Sbjct 14571 AACAACAAACAGGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAACTCGTTGGAG 14512 Query 17015 AATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCA 17074 || ||||||||||||||| | |||| ||||| ||||| || || | |||||| ||||| Sbjct 14511 AAGGTCAACCCGGGCATCATACCTCTCTTCTTCAACCAGAAGATGGAGGCGAAGGACCCG 14452 Query 17075 GAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCT 17134 || ||||| | ||| |||| ||| || || |||| || || ||| || || ||||||| Sbjct 14451 GAGAAGAAAACACCTTCGATGGACGCGAAGGCGACTAGTCTTTCACCGAACAGCGCGTCT 14392 Query 17135 TTGTTACGAATCCATTTCTGCACCCACTCGG-CTTTTTGC---TTTATGCAATCCATCGT 17190 || | |||||| | | |||| |||| ||| | || ||| || || || Sbjct 14391 GCGTCTTGGATCCATCTAAGGGCCCATTCGGCCTTCTCGCAAATTTCTG----GGATGGT 14336 Query 17191 TTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAG 17250 || ||||| || || || || |||||| | | || | || || |||||||| | Sbjct 14335 GTCGATGGCGTTGAACAAGAATTCACTTTCCTTTGGATCCTTGATGTAGGTATCGATCAA 14276 Query 17251 TAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCG 17310 | | ||| ||||||| || ||||| || || || || || || ||||| || | Sbjct 14275 CAAGGAGTAGGTTTCGGAATGAATGTTTTCGATAGCGATTTGGAAACCGTAGAAACTCTT 14216 Query 17311 GGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCC 17370 |||||||| || || || || | |||| || | | |||||||| || || || Sbjct 14215 GGCTTCCGGGATCTGGACCTCGGTGGAGAAATTCTCGACCAAGTTTTCGTTGACAATACC 14156 Query 17371 GTCGCTCGCGGCGAAAAACGC 17391 |||| |||||||| || || Sbjct 14155 GTCGGAGGCGGCGAAGAAGGC 14135 >seq365 Length=19284 Score = 96.9 bits (106), Expect = 4e-15 Identities = 290/444 (65%), Gaps = 14/444 (3%) Strand=Plus/Minus Query 16955 AACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAA 17014 |||| || ||||| || ||| || || || |||||||| | ||| | |||||| ||| Sbjct 18675 AACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAA 18616 Query 17015 AATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCA 17074 || || || ||||||||| | |||| || || ||||| || || | ||| || || || Sbjct 18615 AAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCG 18556 Query 17075 GAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCT 17134 || || || | ||| || | ||| ||||| || | || || ||| | || ||||| Sbjct 18555 GAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCA 18496 Query 17135 TTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTT----GCTTTATGCAATCCATCGT 17190 || |||||||| | |||| ||||| || | | ||| || || || Sbjct 18495 GCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATG----GT 18440 Query 17191 TTCTATGGCCTTAAATAAT--TTCTCTTTTTCCTGTAGG-TCGATTATATACGTATCGAT 17247 | ||||| || || || ||| |||| || |||| || | || || |||||||| Sbjct 18439 GTGAATGGCATTGAACAAGAATTCACTTT---CTTTAGGGTCCTTGATGTAGGTATCGAT 18383 Query 17248 GAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCA 17307 | | | ||| |||| ||||| || || || || || || || ||||| || | Sbjct 18382 CAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACT 18323 Query 17308 TCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGAT 17367 || || | ||||| ||||| | |||| ||| | | ||||| || || || Sbjct 18322 CTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAAT 18263 Query 17368 GCCGTCGCTCGCGGCGAAAAACGC 17391 ||||| ||||||||||| || Sbjct 18262 ACCGTCAGAAGCGGCGAAAAAGGC 18239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517539919937040