Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F000805465.1_202014- 12-19] 878 sequences; 21,919,346 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq206 242 4e-59 seq72 82.4 8e-11 >seq206 Length=37006 Score = 242 bits (268), Expect = 4e-59 Identities = 515/761 (68%), Gaps = 11/761 (1%) Strand=Plus/Plus Query 116615 TTCCCCATACAATACCCGGACATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGG 116674 |||||||| || |||| || || |||| |||||| |||||||| || |||||| Sbjct 13985 TTCCCCATCCAGTACCACGAGATCTGGCAATCGTACAAGCGTGCCGAGGCCTCTTTCTGG 14044 Query 116675 ACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGGGAGCGCT---TGAACGAC 116731 || | |||||| | || |||||||||| | |||||| | | ||||||| Sbjct 14045 ACTGCCGAGGAAATCGATTTGTCCAAGGATATCCATGACTGGAACAACAGAATGAACGAA 14104 Query 116732 AACGAGCGCCATTTCATC--AAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCG 116789 ||||| | |||||| ||| || || ||||| ||||||||| |||||| || | Sbjct 14105 AACGAAAGGTTCTTCATCTCAAGA--GTCCTTGCCTTCTTCGCCGCCTCCGACGGTATTG 14162 Query 116790 TCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCT 116849 ||||||| || |||||||| |||| | ||||| ||| | | || || | | | Sbjct 14163 TCAACGAAAACTTGGTCGAGAATTTCTCCACCGAGGTCCAGATCCCGGAAGCCAAGAGTT 14222 Query 116850 TCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCG 116909 ||||||| || || ||||| || || ||| | || || |||| || || | |||| Sbjct 14223 TCTACGGTTTCCAAATCGCTATCGAAAACATTCATTCCGAAACCTACTCCTTGTTGATCG 14282 Query 116910 ACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGT-TTGTTGAACGCCATCGAGACGATG 116968 | || ||| | | | |||| ||| | ||||| ||||||||||| || || Sbjct 14283 ATACCTACATCAAGGATCCAAAGGA-AAGTGAATTCTTGTTCAACGCCATCGACACCATC 14341 Query 116969 CCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCC 117028 || | ||||||||||| ||||| || | |||||| | | ||| || Sbjct 14342 CCAGAAATTTGCGAGAAGGCCGAATGGGCCCTTAGATGGATCCAAGACGCAGACGCGCTG 14401 Query 117029 TTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTC 117088 ||||| || | || || ||||||||| || |||| || || ||||| || || ||| Sbjct 14402 TTCGGTGAAAGACTAGTCGCCTTCGCGTCCATCGAAGGTGTTTTCTTCTCCGGGTCCTTC 14461 Query 117089 GCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAG 117148 ||| |||| || ||| | ||||| | || | |||||||| |||| ||| ||||||| Sbjct 14462 GCCTCCATCTTCTGGTTGAAGAAGAGAGGTATGATGCCCGGGTTGACCTTCTCCAACGAG 14521 Query 117149 CTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTG 117208 | |||| ||| ||||| ||| |||| |||||||||||||||| ||||| |||||| Sbjct 14522 TTGATCTGCAGAGACGAAGGTTTGCACACCGACTTTGCCTGTTTGTTGTTCGCCCATTTG 14581 Query 117209 GTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAG 117268 | | ||| | | || |||| | | ||||||||||| || |||| ||||| Sbjct 14582 AAGAACAAGCCGGACCCAGCCATCGTCGAGAAAATCGTCACCGAGGCCGTCGAGATCGAA 14641 Query 117269 CAGCGCTTCCTCACCGAAGCGCTGCCGGT-GCGTCTGCTGGGACTCAATTGCGAAACGAT 117327 || | | | || || || |||| || || | |||| || | ||| ||| ||| Sbjct 14642 CAAAGATACTTCCTAGACGCCTTGCCAGTCGCCT-TGCTAGGTATGAATGCCGACTTGAT 14700 Query 117328 GTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCG 117368 | || ||| ||||||||||||| ||||| ||| || ||| Sbjct 14701 GAACCAGTACGTCGAGTTCGTCGCAGACAGACTGTTGGTCG 14741 >seq72 Length=71373 Score = 82.4 bits (90), Expect = 8e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || | || || ||||||||||| | || || ||| | | |||| | | Sbjct 31931 TTCGTTAAGACTTTGACTGGTAAAACCATCACTCTAGAAGTTGAATCTTCTGACACCATT 31990 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | |||| || |||| |||||||| || ||||| | ||||| ||| || | Sbjct 31991 GACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTG 32050 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| || || || || |||| |||| | ||| | |||||||||||| || ||| Sbjct 32051 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAAG 32110 Query 40879 GAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 || |||| | ||| |||| ||| | ||||| || || Sbjct 32111 GAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 32148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515213545469280