Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F000805465.1_202014- 12-19] 878 sequences; 21,919,346 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq326 168 5e-37 seq159 123 2e-23 >seq326 Length=22931 Score = 168 bits (186), Expect = 5e-37 Identities = 373/560 (67%), Gaps = 31/560 (6%) Strand=Plus/Plus Query 96996 AAACTTTAGTGTTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAAT 97055 || ||||||| | ||||| || || ||| ||| || | || ||| | | |||||||| Sbjct 2227 AATCTTTAGTTTCGGGAATGGTCTTGGATTTCTGGTGATTTGTTCTTTCAAGGCATCAAT 2286 Query 97056 GTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATC 97115 ||| | ||||| || ||||| || ||||| ||||| || || || || | | || Sbjct 2287 GTGGTCTTTATAAACATGTGCATCCCCCAAAGTATGAATGAACTCACCTGGCTCCATGTC 2346 Query 97116 AGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCC 97175 || | || ||||| | ||| || | || ||| ||||||||||| || || || Sbjct 2347 GACAACTTTAGCAATCATTCTAGTCAACAAAGCATATGATGCAATGTTAAATGGTACTCC 2406 Query 97176 TAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAG-----------------C 97218 | ||||||||| || | ||| || || || ||||| | Sbjct 2407 CAACCCCATATCACAAGAACGTTGGTACAATAAGCATGAAAGGCGGGGCTTACCGGATCC 2466 Query 97219 TT-TCCATC---------ACACACATAAAACTGACTCAATACATGACAGGGGGGCAACGC 97268 || ||| || || ||||| ||||| || | ||| || || ||||| || Sbjct 2467 TTCTCCTTCTTTGGGGAAACTGACATAGAACTGTGAAAAAATATGGCATGGCGGCAAAGC 2526 Query 97269 CATTTTTGGAACATCTAAGACATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTT 97328 |||||| || ||| ||||| |||| ||| | |||||||||||| || || Sbjct 2527 CATTTTGTCAAAATCAGCTGGGTTCCAGGCACTCATAATGATTCTTCTATCGTAGGGATT 2586 Query 97329 TGTGTGTATGGTATTAATTATCTGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTG 97388 ||| | || ||| ||| | ||| || |||||||||| |||| |||| ||| | || Sbjct 2587 TGTCTTTAGTTTATGAATAACCTGTTTCAATTGATCAATACCTTGTCCAGTATAGTCGT- 2645 Query 97389 CTTAAGAC--CTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCA 97446 | | || |||| |||| || ||||||||||||||||| ||||||||||| || || Sbjct 2646 CATCGCACGTCTTG-TATTTAGCACCAAAATGCCTCCATTGAAATCCATAAACGGGCCCC 2704 Query 97447 AGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTT 97506 || |||||| ||| ||||| ||| || | |||||||||||| | ||||||||| Sbjct 2705 AGATCTCCTACTTTCCTATCTTTGAACCCCATCTTATCTAAATATTCACGAGATCCATTA 2764 Query 97507 GCATCCCAAATGTGCACACC 97526 | |||||||| | ||||| Sbjct 2765 CCGTCCCAAATCTTAACACC 2784 >seq159 Length=45349 Score = 123 bits (136), Expect = 2e-23 Identities = 412/640 (64%), Gaps = 41/640 (6%) Strand=Plus/Plus Query 96912 CATTTTTATGCTAGGGTAAGGGTTATAGTTTTCCAGAATAATGTCATTTGCT---TTAAA 96968 ||||| || || |||| ||| || |||| ||| ||| | || | || ||||| Sbjct 31956 CATTTGGATTCTTGGGTGAGGATTGTAGTCTTC---AATTTCGAAATCTTCTAACTTAAA 32012 Query 96969 ATCATCAATAGATGCAATCTTTCTGGCAAACTTTAGTGTTGGGAAAGGCCTGGGAGTTCG 97028 |||||||| || ||| | || || ||||| | | ||||| || || ||| || Sbjct 32013 GTCATCAATTTCTGTAATGTCCCTTTTAATCTTTAATTTGGGGAATGGTCTTGGATCTCT 32072 Query 97029 CGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGT 97088 | || || || | | |||||||| |||| | ||| | || ||||| || ||||| Sbjct 32073 TGAAATTTGTTCATTCAAGGCATCAATATGATCCTTATACACATGTGCATCCCCCAAAGT 32132 Query 97089 GTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGA 97148 ||||| || || || || | | |||| ||| | || ||||| | ||| | ||| | Sbjct 32133 ATGAATGAACTCACCCGGTTCCATATCAACGACTTTAGCTATCATTCTAGTCAGTAGCGC 32192 Query 97149 ATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTG 97208 ||| || || ||||| ||||| || || ||||||||| || | ||| || | | Sbjct 32193 ATATGAGGCGATATTAAATGGCACACCGAGCCCCATATCACAGGAACGTTGGTACAGCAA 32252 Query 97209 ACAGGAAAG-------------CTT-----TCCATC---------ACACACATAAAACTG 97241 || ||||| ||| ||| || || |||||||| || Sbjct 32253 GCACGAAAGGCGAGGTTTACCACTTCCACTTCCCTCTTTGGGGAAACTGACATAAAATTG 32312 Query 97242 ACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACA 97301 || | || || || || || ||||| || || |||| |||||||| | Sbjct 32313 TGAAAAAATGTGGCATGGCGGTAAGGCCATCTTGTCAAAATCTGCAGGGTTCCAAGCGCT 32372 Query 97302 CATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTG 97361 ||| | ||||||||||| |||||||| | || | | || | |||||| | || Sbjct 32373 CATGATGATTCTTCTATCATAAGGGTTTGTCTTTAATTTGTGTATAACCTGCTTCAGCTG 32432 Query 97362 ATCAACGCCTTCTCCACCATA---ATTGT-GCTTAAGACCTTGATATTCTGCTCCAAAAT 97417 ||| | |||| ||| ||| || || || || |||| |||| || ||||||| Sbjct 32433 ATCGATACCTTGTCCGGTATAGTCATCGTCGC---AGGTCTTG-TATTTGGCACCAAAAT 32488 Query 97418 GCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAA 97477 | ||||||||||| ||||||||||| || || || ||| ||| ||||| || || | Sbjct 32489 GTCTCCATTGGAACCCATAAACAGGACCCAGATCCCCTACTTTCCTATCCATGAGTCCCA 32548 Query 97478 GCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAAT 97517 ||| || ||||| | ||||||||| | |||||||| Sbjct 32549 TCTTGTCCAAATATTCACGAGATCCATTACCGTCCCAAAT 32588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346780289194460