Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F000805465.1_202014-
12-19] 878 sequences; 21,919,346 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq165 141 1e-28
seq72 127 3e-24
seq2 114 2e-20
seq326 113 7e-20
seq43 113 7e-20
seq159 87.8 3e-12
>seq165
Length=43850
Score = 141 bits (156), Expect = 1e-28
Identities = 174/238 (73%), Gaps = 0/238 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | || || |||||||| || |||||||| ||||| ||||| |
Sbjct 16034 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 15975
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || ||| || | ||| ||||||||||| || |||||||| || || ||||||
Sbjct 15974 GACACTATTGACAACGTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 15915
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| | |||||||| || || ||| | || || || |||| | ||||||||
Sbjct 15914 CAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 15855
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776
||||| ||||| || || ||||||||||| || | || |||||||||| ||| ||
Sbjct 15854 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGGTATGCAAATTT 15797
Score = 109 bits (120), Expect = 8e-19
Identities = 143/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | || || |||||||| || |||||||| ||||| ||||| |
Sbjct 15806 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 15747
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || ||| || | || |||||||||||| || |||||||| || || || ||
Sbjct 15746 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 15687
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| | |||||||| || || ||| |||| ||| || |||| | || || |||
Sbjct 15686 CAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 15627
Query 124719 ATTCAAAAAGAATCAACT 124736
|||||||| || || |||
Sbjct 15626 ATTCAAAAGGAGTCCACT 15609
Score = 105 bits (116), Expect = 1e-17
Identities = 166/238 (70%), Gaps = 0/238 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || ||| | ||||| | || || ||||| ||||| | || ||||| |
Sbjct 16262 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 16203
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| || || | || |||||||||||| || |||||||| || || ||||||
Sbjct 16202 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 16143
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| | || ||||| || || || |||| || || |||| | ||||| ||
Sbjct 16142 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAAC 16083
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776
||||| || ||||| ||| | || ||||| || | || |||||||||| ||| ||
Sbjct 16082 ATTCAGAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGGTATGCAAATTT 16025
Score = 104 bits (114), Expect = 4e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || || | ||||| | || || ||||| ||||| | || ||||| |
Sbjct 16490 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 16431
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| || || | || |||||||||||| || |||||||| || || ||||||
Sbjct 16430 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 16371
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||||| | || ||||| || || || ||||| || || |||| || || || ||
Sbjct 16370 CAAAGATTGATCTTTGCCGGTAAGCAGTTAGAAGACGGTAGAACCTTGTCTGACTACAAC 16311
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|| ||||| ||||| ||| | || ||||| || | || ||||||||||
Sbjct 16310 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGGTAT 16261
>seq72
Length=71373
Score = 127 bits (140), Expect = 3e-24
Identities = 157/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 124554 AAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATTTCTAAT 124613
||||| | || || ||||| || ||| |||| ||||| | ||| || ||| |||
Sbjct 31937 AAGACTTTGACTGGTAAAACCATCACTCTAGAAGTTGAATCTTCTGACACCATTGACAAT 31996
Query 124614 TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTT 124673
| ||| || |||||||| ||||||||||| |||||||| |||||||| | || |||
Sbjct 31997 GTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTGATCTTT 32056
Query 124674 GCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCA 124733
|| || || ||||| || || || |||| || || || || |||||||| |||||
Sbjct 32057 GCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAAGGAATCC 32116
Query 124734 ACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||||| ||||| || || | || ||||||||||
Sbjct 32117 ACTTTACATTTAGTCTTGAGATTGAGAGGTGGTAT 32151
>seq2
Length=186594
Score = 114 bits (126), Expect = 2e-20
Identities = 158/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 124548 TTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATT 124607
||| | ||||| | || || || || || ||| | || ||||| | ||| || |||
Sbjct 30119 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 30178
Query 124608 TCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTT 124667
||| | || || |||||||| || |||||||| |||||||| |||||||| |
Sbjct 30179 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 30238
Query 124668 ATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAA 124727
|| ||||| || || ||||| || || || |||| || || || || |||||||||
Sbjct 30239 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 30298
Query 124728 GAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||||| |||||||| || || || | || ||||||||||
Sbjct 30299 GAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGGTAT 30339
>seq326
Length=22931
Score = 113 bits (124), Expect = 7e-20
Identities = 359/556 (65%), Gaps = 28/556 (5%)
Strand=Plus/Plus
Query 205318 CtttttatttttaattttGGAAATGGGTTTGGTGTACGTTCTAATTGtttttttAATCCA 205377
||||| || |||| ||| || ||||| |||| | | | ||||| ||| || ||
Sbjct 2222 CTTTTAATCTTTAGTTTCGGGAATGGTCTTGGATTTCTGGTGATTTGTTCTTTCAAGGCA 2281
Query 205378 TTAATATGATTAACATATATATGTGCATTACCAATATTATGAATAAATTCATATGGTTTT 205437
| ||| || | ||| | |||||||| || | | ||||||| || ||| ||| |
Sbjct 2282 TCAATGTGGTCTTTATAAACATGTGCATCCCCCAAAGTATGAATGAACTCACCTGGCTCC 2341
Query 205438 AAATTAGTTAAATGT-GCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAATGG 205496
| | | || | | |||||||| |||||| ||| ||| |||| ||||||||
Sbjct 2342 ATGTC-GACAACTTTAGCAATCATTCTAGTCAACAAAGCATATGATGCAATGTTAAATGG 2400
Query 205497 TACACCTAAACCCATATCAGCTGATCTTTGATACATTTGACATGTAAG------------ 205544
||| || || ||||||||| || | ||| |||| | |||| |||
Sbjct 2401 TACTCCCAACCCCATATCACAAGAACGTTGGTACAATAAGCATGAAAGGCGGGGCTTACC 2460
Query 205545 --ATATTTATTATTAATT----------ACATGAAATTGTACAAAACAATGACAAGGTGG 205592
|| || | || || |||| || ||| |||| ||| || || ||
Sbjct 2461 GGATCCTTCTCCTTCTTTGGGGAAACTGACATAGAACTGTGAAAAAATATGGCATGGCGG 2520
Query 205593 TATAACCATATTTTCAACATCTATAGGATTCCAGGCTGTTAATATTATATTTCTAGATTC 205652
| | |||| || |||| ||| || |||||||| | | || || ||||| |
Sbjct 2521 CAAAGCCATTTTGTCAAAATCAGCTGGGTTCCAGGCACTCATAATGATTCTTCTATCGTA 2580
Query 205653 AGGtttattttttattttatttatAATATGTGTTAATTGATCAAATCCTTGATTTGTATA 205712
|| || | |||| ||||| |||| ||| | |||||||||| ||||| |||||
Sbjct 2581 GGGATTTGTCTTTAGTTTATGAATAACCTGTTTCAATTGATCAATACCTTGTCCAGTATA 2640
Query 205713 ATTTGTATC-CATATCAATATATTTAGCACCAAAATGACGCCATTGAAAACCATAAACTG 205771
| ||| || || | ||||||||||||||||| | ||||||||| |||||||| |
Sbjct 2641 GTCGTCATCGCACGTCT-TGTATTTAGCACCAAAATGCCTCCATTGAAATCCATAAACGG 2699
Query 205772 GACCTAAATCACCTTCTTTTCTATCATTAAAACCACGtttttttatatattttaatgatc 205831
| || | ||| ||| |||| ||||| || || || || | || ||||| ||||
Sbjct 2700 GCCCCAGATCTCCTACTTTCCTATCTTTGAACCCCATCTTATCTAAATATTCACGAGATC 2759
Query 205832 cattttcatcccaaat 205847
|||| | ||||||||
Sbjct 2760 CATTACCGTCCCAAAT 2775
>seq43
Length=88948
Score = 113 bits (124), Expect = 7e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 124554 AAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATTTCTAAT 124613
||||| | || || || || || ||| | || ||||| | ||| || ||| |||
Sbjct 26833 AAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATTGACAAT 26892
Query 124614 TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTT 124673
| || || || ||||| || |||||||| ||||||||||||||||| | || |||
Sbjct 26893 GTCAAGTCCAAGATCCAAGACAAGGAAGGTATCCCACCTGATCAACAAAGATTGATCTTT 26952
Query 124674 GCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCA 124733
|| || || ||||| || || || |||| || || || || || ||||| |||||
Sbjct 26953 GCTGGTAAGCAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAGGAATCC 27012
Query 124734 ACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||||| |||||||| || | ||| ||||||||||
Sbjct 27013 ACTTTACATTTGGTCTTGAGATTAAGAGGTGGTAT 27047
>seq159
Length=45349
Score = 87.8 bits (96), Expect = 3e-12
Identities = 232/352 (66%), Gaps = 2/352 (1%)
Strand=Plus/Plus
Query 205561 ACATGAAATTGTACAAAACAATGACAAGGTGGTATAACCATATTTTCAACATCTATAGGA 205620
|||| ||||||| |||| || || || |||| |||| || |||| |||| |||
Sbjct 32302 ACATAAAATTGTGAAAAAATGTGGCATGGCGGTAAGGCCATCTTGTCAAAATCTGCAGGG 32361
Query 205621 TTCCAGGCTGTTAATATTATATTTCTAGATTCAGGtttattttttattttatttatAATA 205680
||||| || | | || || ||||| | ||| || | |||| ||| | |||||
Sbjct 32362 TTCCAAGCGCTCATGATGATTCTTCTATCATAAGGGTTTGTCTTTAATTTGTGTATAACC 32421
Query 205681 TGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATC-CATATCAATATATTTAGC 205739
|| | | ||||| | ||||| ||||| | || || || | ||||| ||
Sbjct 32422 TGCTTCAGCTGATCGATACCTTGTCCGGTATAGTCATCGTCGCAGGTCT-TGTATTTGGC 32480
Query 205740 ACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCTTCTTTTCTATCATT 205799
||||||||| | |||||| || |||||||| ||||| | ||| ||| |||| ||||| |
Sbjct 32481 ACCAAAATGTCTCCATTGGAACCCATAAACAGGACCCAGATCCCCTACTTTCCTATCCAT 32540
Query 205800 AAAACCACGtttttttatatattttaatgatccattttcatcccaaatatggattccttt 205859
| || || | | ||||| |||||||| | |||||||| | ||||
Sbjct 32541 GAGTCCCATCTTGTCCAAATATTCACGAGATCCATTACCGTCCCAAATTCTAACACCTTG 32600
Query 205860 attttttaGAATATTTGTATTAGTTGATCCAGATATAAACCATAATAATTCT 205911
| || ||||| | || || | |||| || |||||||| |||||||
Sbjct 32601 TTCAGATAAGATATTAGCATCTGTAGCACCAGCTACAAACCATAGTAATTCT 32652
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755447708870400
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