Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F000805465.1_202014- 12-19] 878 sequences; 21,919,346 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq156 122 1e-23 seq234 113 7e-21 seq386 107 3e-19 seq332 95.1 2e-15 >seq156 Length=46030 Score = 122 bits (134), Expect = 1e-23 Identities = 191/271 (70%), Gaps = 2/271 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||| | |||| ||| |||||||||| ||||| ||||| ||||||||||| Sbjct 896 GCTAAGCGTCACAGAAAGAT-TCTAAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 954 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | ||||| | | ||||| ||||||||| |||| || || |||| ||||| | Sbjct 955 CAGAAGATTGGCTAGAAGAGGTGGTGTCAAGCGTATCTCCGGTTTAATCTACGAAGAAGT 1014 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | ||| |||||| |||| | | |||| ||| || || | || || || Sbjct 1015 CAGAGCTGTCTTGAAGTCCTTCTTGGAATCCGTCATCAGAGACTCTGTTACTTACACTGA 1074 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | |||||||| || || | ||| | || ||||| ||||| | ||||| Sbjct 1075 ACACGCCAAGAGAAAGACTGTTACTTCTCTAGATGTTGTTTATGCTTTGAAGAGACAAGG 1134 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702 | | | |||||||| || |||||||| Sbjct 1135 TAGAACCTTGTATGGTTTCGGTGGTTAATCT 1165 >seq234 Length=31838 Score = 113 bits (124), Expect = 7e-21 Identities = 188/269 (70%), Gaps = 2/269 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| | | ||| ||| |||||||||||||||| || || ||||||||||| Sbjct 29269 GCCAAGCGTCACAGAAAGAT-TCTAAGAGATAACATCCAAGGTATTACTAAGCCAGCTAT 29211 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | | ||| | | ||||| ||||||||| | ||||| ||| |||| ||||| | Sbjct 29210 CAGAAGATTAGCTAGAAGAGGTGGTGTCAAGCGTATTTCTGGTTTGATCTACGAAGAAGT 29151 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | ||| ||||| |||| | | |||| ||| || || | || ||||| Sbjct 29150 CAGAGCTGTCTTGAAATCCTTCTTGGAATCCGTCATCAGAGACTCTGTTACTTACACCGA 29091 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | |||||||| || || ||||| | || ||||| ||||| | ||||| Sbjct 29090 ACACGCCAAGAGAAAGACTGTTACTTCTTTGGATGTTGTTTATGCTTTGAAGAGACAAGG 29031 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAAT 16700 | | | || ||||| || |||||| Sbjct 29030 TAGAACCTTATACGGTTTCGGTGGTTAAT 29002 >seq386 Length=17166 Score = 107 bits (118), Expect = 3e-19 Identities = 186/268 (69%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| | | ||| ||| |||||||||| ||||| ||||| ||||||||||| Sbjct 14468 GCCAAGCGTCACAGAAAGAT-TCTAAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 14410 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | | | ||| | | ||||| ||||||||| | ||||| ||| |||| ||||| | Sbjct 14409 CAGAAGATTAGCTAGAAGAGGTGGTGTCAAGCGTATTTCTGGTTTGATCTACGAAGAAGT 14350 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 | | || ||||| |||| | | |||| ||| || || | || || || Sbjct 14349 CAGAGCCGTCTTGAAATCCTTCTTGGAATCCGTCATCAGGGACTCTGTTACTTACACTGA 14290 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | |||||||| || || ||||| | || ||||| ||||| | ||||| Sbjct 14289 ACACGCCAAGAGAAAGACTGTTACTTCTTTGGATGTTGTTTATGCTTTGAAGAGACAAGG 14230 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | |||||||| || ||||| Sbjct 14229 TAGAACCTTATATGGTTTCGGTGGTTAA 14202 >seq332 Length=22547 Score = 95.1 bits (104), Expect = 2e-15 Identities = 166/242 (69%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||||||||| ||||| ||||| |||||||||||| | | ||||| | | ||||| | Sbjct 978 GAGATAACATTCAAGGTATCACTAAGCCAGCTATCAGAAGATTGGCTAGAAGAGGTGGTG 1037 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 |||||||| |||| || || |||| ||||| | | | ||| |||||| ||| | Sbjct 1038 TCAAGCGTATCTCCGGTTTAATCTACGAAGAAGTCAGAGCTGTCTTGAAGTCCTTTTTGG 1097 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 | |||| ||| || || | || || || ||||| || | |||||||| || | Sbjct 1098 AATCCGTCATCAGAGACTCTGTTACTTACACTGAACACGCCAAGAGAAAGACTGTTACTT 1157 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697 | | ||| | || || || ||||| | ||||| | | | || ||||| || ||| Sbjct 1158 CTCTAGATGTTGTTTACGCTTTGAAGAGACAAGGTAGAACCTTATACGGTTTCGGTGGTT 1217 Query 16698 AA 16699 || Sbjct 1218 AA 1219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074397238454