Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F000805465.1_202014-
12-19] 878 sequences; 21,919,346 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq156 122 1e-23
seq234 113 7e-21
seq386 107 3e-19
seq332 95.1 2e-15
>seq156
Length=46030
Score = 122 bits (134), Expect = 1e-23
Identities = 191/271 (70%), Gaps = 2/271 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||||||||||| | |||| ||| |||||||||| ||||| ||||| |||||||||||
Sbjct 896 GCTAAGCGTCACAGAAAGAT-TCTAAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 954
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | ||||| | | ||||| ||||||||| |||| || || |||| ||||| |
Sbjct 955 CAGAAGATTGGCTAGAAGAGGTGGTGTCAAGCGTATCTCCGGTTTAATCTACGAAGAAGT 1014
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | ||| |||||| |||| | | |||| ||| || || | || || ||
Sbjct 1015 CAGAGCTGTCTTGAAGTCCTTCTTGGAATCCGTCATCAGAGACTCTGTTACTTACACTGA 1074
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||| || || | ||| | || ||||| ||||| | |||||
Sbjct 1075 ACACGCCAAGAGAAAGACTGTTACTTCTCTAGATGTTGTTTATGCTTTGAAGAGACAAGG 1134
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702
| | | |||||||| || ||||||||
Sbjct 1135 TAGAACCTTGTATGGTTTCGGTGGTTAATCT 1165
>seq234
Length=31838
Score = 113 bits (124), Expect = 7e-21
Identities = 188/269 (70%), Gaps = 2/269 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| | | ||| ||| |||||||||||||||| || || |||||||||||
Sbjct 29269 GCCAAGCGTCACAGAAAGAT-TCTAAGAGATAACATCCAAGGTATTACTAAGCCAGCTAT 29211
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | | ||| | | ||||| ||||||||| | ||||| ||| |||| ||||| |
Sbjct 29210 CAGAAGATTAGCTAGAAGAGGTGGTGTCAAGCGTATTTCTGGTTTGATCTACGAAGAAGT 29151
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | ||| ||||| |||| | | |||| ||| || || | || |||||
Sbjct 29150 CAGAGCTGTCTTGAAATCCTTCTTGGAATCCGTCATCAGAGACTCTGTTACTTACACCGA 29091
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||| || || ||||| | || ||||| ||||| | |||||
Sbjct 29090 ACACGCCAAGAGAAAGACTGTTACTTCTTTGGATGTTGTTTATGCTTTGAAGAGACAAGG 29031
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAAT 16700
| | | || ||||| || ||||||
Sbjct 29030 TAGAACCTTATACGGTTTCGGTGGTTAAT 29002
>seq386
Length=17166
Score = 107 bits (118), Expect = 3e-19
Identities = 186/268 (69%), Gaps = 2/268 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| | | ||| ||| |||||||||| ||||| ||||| |||||||||||
Sbjct 14468 GCCAAGCGTCACAGAAAGAT-TCTAAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 14410
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | | ||| | | ||||| ||||||||| | ||||| ||| |||| ||||| |
Sbjct 14409 CAGAAGATTAGCTAGAAGAGGTGGTGTCAAGCGTATTTCTGGTTTGATCTACGAAGAAGT 14350
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | || ||||| |||| | | |||| ||| || || | || || ||
Sbjct 14349 CAGAGCCGTCTTGAAATCCTTCTTGGAATCCGTCATCAGGGACTCTGTTACTTACACTGA 14290
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||| || || ||||| | || ||||| ||||| | |||||
Sbjct 14289 ACACGCCAAGAGAAAGACTGTTACTTCTTTGGATGTTGTTTATGCTTTGAAGAGACAAGG 14230
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | | |||||||| || |||||
Sbjct 14229 TAGAACCTTATATGGTTTCGGTGGTTAA 14202
>seq332
Length=22547
Score = 95.1 bits (104), Expect = 2e-15
Identities = 166/242 (69%), Gaps = 0/242 (0%)
Strand=Plus/Plus
Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517
|||||||||| ||||| ||||| |||||||||||| | | ||||| | | ||||| |
Sbjct 978 GAGATAACATTCAAGGTATCACTAAGCCAGCTATCAGAAGATTGGCTAGAAGAGGTGGTG 1037
Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577
|||||||| |||| || || |||| ||||| | | | ||| |||||| ||| |
Sbjct 1038 TCAAGCGTATCTCCGGTTTAATCTACGAAGAAGTCAGAGCTGTCTTGAAGTCCTTTTTGG 1097
Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637
| |||| ||| || || | || || || ||||| || | |||||||| || |
Sbjct 1098 AATCCGTCATCAGAGACTCTGTTACTTACACTGAACACGCCAAGAGAAAGACTGTTACTT 1157
Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697
| | ||| | || || || ||||| | ||||| | | | || ||||| || |||
Sbjct 1158 CTCTAGATGTTGTTTACGCTTTGAAGAGACAAGGTAGAACCTTATACGGTTTCGGTGGTT 1217
Query 16698 AA 16699
||
Sbjct 1218 AA 1219
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074397238454
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |