Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F000805465.1_202014-
12-19] 878 sequences; 21,919,346 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq405 120 2e-22
seq165 86.0 5e-12
>seq405
Length=15789
Score = 120 bits (132), Expect = 2e-22
Identities = 162/223 (73%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
|| |||| ||| || || |||| ||||| |||||||||||||| ||||| ||||| | |
Sbjct 222 CCACCTCTTAGTCTTAGGACCAAGTGCAGAGTGGACTCCTTTTGAATGTTATAGTCCGAC 163
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| || |||| |||| ||| || || ||| |||| | || |||||||||| |||
Sbjct 162 AAAGTTCTGCCGTCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGA 103
Query 16829 ACGCCCTCTTTGT-CGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887
| ||||||||| | | | | || || ||| || | | | | |||||| || |||
Sbjct 102 ATGCCCTCTTTATCCTGTATCTTACT-CTTTACATTGTCGATCGTGTCGGAGGACTCGAC 44
Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATC 16930
|||| || ||||| || ||||| | || ||||| ||||||
Sbjct 43 CTCCAAAGTAATGGTCTTACCGGTTAAAGTCTTGACGAAAATC 1
>seq165
Length=43850
Score = 86.0 bits (94), Expect = 5e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780
|||| |||| || || || || |||||||| ||||||||||| | || |||| | ||
Sbjct 16276 CTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCG 16335
Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840
|| || || || || || ||| | || | | ||||| || ||| | || || |||
Sbjct 16336 TCTTCTAACTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTG 16395
Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900
|| ||||| | ||| || | | | | || ||| | || ||||| || |||
Sbjct 16396 TCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATG 16455
Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
||||| ||||||| || ||||| |||||||||||
Sbjct 16456 GTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 16490
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405083665305220
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |