Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F000805465.1_202014- 12-19] 878 sequences; 21,919,346 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq165 120 7e-22 seq32 104 6e-17 seq60 96.9 8e-15 >seq165 Length=43850 Score = 120 bits (132), Expect = 7e-22 Identities = 146/198 (74%), Gaps = 6/198 (3%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || ||||| | | || | ||||||||||| || || || || || Sbjct 16299 TTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCTAACTGCTTACCGGCAAA 16358 Query 288342 GATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||||| | ||||| |||| ||||| ||||| || || || ||||||| || || Sbjct 16359 GATCAATCTTTGTTG---ATCTGGAGGGATACCTTCCTTGTCTTGAATTTTCGACTTAAC 16415 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 ||| || || | |||| ||||| ||||| | || || || || ||||||| |||||| Sbjct 16416 GTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTT 16475 Query 288459 GACGAATATCTGCATTAT 288476 |||||| |||||||| || Sbjct 16476 GACGAAAATCTGCATAAT 16493 >seq32 Length=102181 Score = 104 bits (114), Expect = 6e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || ||||||| | || | || ||||| ||||| || || || || Sbjct 8589 TTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAA 8530 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| | ||||| | ||| || ||||| || || ||||| || | || || || Sbjct 8529 GATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTGACATT 8470 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || ||||| ||||| || || || ||||| ||||| | ||||||||| Sbjct 8469 GTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGAC 8410 Query 288462 GAATATCTGCAT 288473 ||| || ||||| Sbjct 8409 GAAAATTTGCAT 8398 >seq60 Length=75461 Score = 96.9 bits (106), Expect = 8e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || |||||||| || ||||| | | || | |||||||| ||||| || || || ||| Sbjct 10563 TCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAG 10504 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||||| | ||| || ||||| || || || || || | || || || Sbjct 10503 ATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGAATCTTAGACTTGACATTG 10444 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || |||| || ||||| ||||| || || || ||||| ||||| | |||||||||| Sbjct 10443 TCAATAGTGTCTGAAGATTCAACTTCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACG 10384 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 10383 AAAATTTGCAT 10373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179641129625284