Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F000805465.1_202014-
12-19] 878 sequences; 21,919,346 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq16 125 8e-24
seq4 116 4e-21
>seq16
Length=134364
Score = 125 bits (138), Expect = 8e-24
Identities = 323/488 (66%), Gaps = 12/488 (2%)
Strand=Plus/Minus
Query 154602 ATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGATCACAGGGTGAGTATGCA 154661
|| ||||| || ||| ||| || |||||||| || |||| | || ||||| ||| |
Sbjct 129227 ATTACAGGTTTCGATGGTATTTCTTTACAACCAAATTCAGGTGCTCAAGGTGAATATACT 129168
Query 154662 GGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGTATGT 154721
|| ||| || |||| | | |||| || | ||| || || | | || || |||
Sbjct 129167 GGTCTGAGAGTAATCAGATCCTACCTGGAAAGCAAAGGTGAAAATCATCGTAACGTGTGT 129108
Query 154722 TTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGGATGAAA 154781
|| || || | || || ||||| || ||||| ||| ||| | ||||| || | |||
Sbjct 129107 TTAATCCCTGTATCCGCTCATGGTACAAATCCGGCTTCTGCCGCTATGGCGGGTTTAAAA 129048
Query 154782 GTTGTAGGTGTCAAGTGTGATGATGATGGTAACATAGACATCAAAGATCTAGAGAAGAAA 154841
||||| |||||| ||| | ||||| |||| | || || |||| ||
Sbjct 129047 GTTGTTCCTGTCAACTGTTTGCAGGATGGCTCATTAGATCTGGTTGACTTAAAGAATAAG 128988
Query 154842 GCAATCATGAATA-CATTT----GAACTGTCATGTATTATGATTACATACCCATCTACAC 154896
|| |||| | |||| ||||| | | ||||| || || || |||||
Sbjct 128987 GC-----TGAACAACATTCTAAAGAACTAGCCGCCGTAATGATCACCTATCCTTCTACTT 128933
Query 154897 ATGGTGTATTTGAAACTAACATTAGACA-GATATGTAAGATCGTTCATGACAATGGTGGT 154955
| ||| |||||||| | ||| ||| | ||| | | ||||| ||| ||||||
Sbjct 128932 ACGGTTTATTTGAACCAGGCATCCAACATGCTAT-TGATATCGTACATTCTTTTGGTGGA 128874
Query 154956 CAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAG 155015
|| || ||| | ||||| || ||| | ||||| ||||| || ||| | ||| | ||
Sbjct 128873 CAAGTCTATTTGGATGGTGCTAATATGAATGCGCAGGTTGGGCTAACTTCACCCGGAGAT 128814
Query 155016 TATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGGAGGT 155075
|||||||||||| || || | || |||||||| ||||||| ||||| ||||| |||
Sbjct 128813 CTTGGTGCAGATGTTTGCCACTTGAATTTACATAAGACATTCTCCATTCCTCATGGTGGT 128754
Query 155076 GGAGGTCC 155083
|| |||||
Sbjct 128753 GGTGGTCC 128746
>seq4
Length=177693
Score = 116 bits (128), Expect = 4e-21
Identities = 182/258 (71%), Gaps = 2/258 (1%)
Strand=Plus/Plus
Query 153205 TTATAGGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTTCTTG 153264
|||| ||| | |||||||| || || ||| || ||||| || || ||||| | | |
Sbjct 3970 TTATTGGTAAGGGATACTACGGCACGATTTTGCCGCCAGTTATTCAAAGAAACCTATTGG 4029
Query 153265 AGAATCCTAGT-TGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGAAGA 153323
| || || || |||||||| ||||| ||||| || || |||| ||||||||||| |||
Sbjct 4030 A-AAGCCCAGAATGGTACACTTCTTATACTCCATACCAGCCTGAAATATCTCAGGGTAGA 4088
Query 153324 TTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCAATAGCA 153383
|||||||| ||| | || | |||||| | | | || | || || || || | |||
Sbjct 4089 TTGGAAGCATTACTAAACTTCCAAACAGTAGTTTCCGATTTGACTGGTTTGCCTGTGGCA 4148
Query 153384 AACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATGCTATTAGCATATAAT 153443
||||| || | || ||||||| || || || | ||||| |||||| | ||| ||||
Sbjct 4149 AACGCCTCATTGTTGGATGAAGGTACCGCGGCTGGTGAAGCTATGCTACTGTCATTTAAT 4208
Query 153444 TCTACAAGAGATAAGAAG 153461
| | ||| | || |||
Sbjct 4209 ATTTCCAGAAAGAAAAAG 4226
Score = 105 bits (116), Expect = 8e-18
Identities = 157/220 (71%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 153768 CAAAGGTTTGGTATTCCTATGGGATATGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 153827
|||||||| ||| |||| ||||| ||||| |||||||||||||| || || || |
Sbjct 4554 CAAAGGTTCGGTGTTCCAATGGGTTATGGTGGTCCTCATGCTGCCTTTTTCGCCGTTATT 4613
Query 153828 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGTGAAGGT 153887
|| || || ||||| || |||||||||||||| ||| || || | ||||
Sbjct 4614 GATAAACTGAACAGAAAAATTCCTGGCAGAATTGTTGGTATCTCCAAGGACCGCCTAGGT 4673
Query 153888 AATAAAG-CATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGC 153946
||| | | ||| | ||||| |||| |||||||| ||||| || | | || |||||
Sbjct 4674 AATCCTGCCCTAC-GTTTAGCTTTACAAACTAGAGAACAGCACATTAAACGTGATAAAGC 4732
Query 153947 AACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAAT 153986
||| ||||| ||||| ||||| || || ||||||||
Sbjct 4733 AACTTCAAACATTTGCACCGCTCAAGCCCTTTTGGCTAAT 4772
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579206443139520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |