Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F000805465.1_202014-
12-19] 878 sequences; 21,919,346 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq165 109 4e-19
seq405 100 2e-16
seq8 95.1 9e-15
seq2 91.5 1e-13
>seq165
Length=43850
Score = 109 bits (120), Expect = 4e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613
|||||||||||| | ||| |||||| ||||| || |||||||| || ||| | ||||
Sbjct 15822 CAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTC 15881
Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
|||| |||||||||||||| |||| || |||||||| | |||| || ||||||||
Sbjct 15882 TTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTC 15941
Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733
||| || ||| || | | || || || | || ||||| | || || ||
Sbjct 15942 TTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGT 16001
Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || || | |||||| || ||||| |||||
Sbjct 16002 CTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 16034
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613
||||||||| || || || || || ||||| ||||||||||| || ||| | ||||
Sbjct 16050 CAACACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTC 16109
Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
|| | ||||||||||||||| |||| || |||||||| | || | || ||||||||
Sbjct 16110 TTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTC 16169
Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733
||| || || || | | | || || | || || |||| || || ||
Sbjct 16170 TTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGT 16229
Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||| || |||||||| || ||||| ||||||||
Sbjct 16230 TTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 16262
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613
||||||||| || || || || ||||| || ||||| ||||| | ||| | ||||
Sbjct 16278 CAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTC 16337
Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
|| ||||||||||||||||| |||| || |||||||| | || | || ||||||||
Sbjct 16338 TTCTAACTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTC 16397
Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733
||| || || || | | | || || | || || |||| || || ||
Sbjct 16398 TTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGT 16457
Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||| || |||||||| || || |||||||||||
Sbjct 16458 TTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 16490
>seq405
Length=15789
Score = 100 bits (110), Expect = 2e-16
Identities = 156/223 (70%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598
||| || ||||| | | ||||| || || ||| ||| |||||||| || || || ||
Sbjct 223 GCCACCTCTTAGTCTTAGGACCAAGTGCAGAGTGGACTCCTTTTGAATGTTATAGTCCGA 164
Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658
| | ||| |||| |||| |||||||||||||| |||| | |||||| |||| ||
Sbjct 163 CAAAGTTCTGCCGTCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGG 104
Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718
|| |||||| || || ||||| |||||| | | | || || | ||| ||
Sbjct 103 AATGCCCTCTTTATCCTGTATCTTACTCTTTACATTGTCGATCGTGTCGGAGGACTCGAC 44
Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATC 48761
||||| ||||| || || || || ||||| || || ||||||
Sbjct 43 CTCCAAAGTAATGGTCTTACCGGTTAAAGTCTTGACGAAAATC 1
>seq8
Length=154085
Score = 95.1 bits (104), Expect = 9e-15
Identities = 144/205 (70%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613
||| || ||||||| ||| || ||||| |||||||| ||||| | ||| | ||||
Sbjct 41254 CAAAACTAAATGTAAAGTGGATTCCTTTTGGATATTGTAGTCAGACAAGGTTCTACCGTC 41195
Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
||||| |||||||| ||||| || | || ||||| || | |||| || ||||||||
Sbjct 41194 TTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGAATACCTTCCTTGTC 41135
Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733
||||||| || ||| | | | || || | || || |||| || || ||
Sbjct 41134 TTGAATCTTTGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGT 41075
Query 48734 TTTTCCCGTCAAAGTTTTTACAAAA 48758
|| || ||||||||||| ||||||
Sbjct 41074 CTTACCAGTCAAAGTTTTGACAAAA 41050
>seq2
Length=186594
Score = 91.5 bits (100), Expect = 1e-13
Identities = 130/183 (71%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635
||||||||||| ||||| ||||| | ||| | |||| ||||| |||||||| |||||
Sbjct 30300 TCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAG 30241
Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695
|||| || ||||| || | || | || |||||||| ||||||| || |||
Sbjct 30240 ATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTG 30181
Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755
| | || || || | || || |||| || || || || || |||||||| || |||
Sbjct 30180 TCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTGACA 30121
Query 48756 AAA 48758
|||
Sbjct 30120 AAA 30118
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380933523729594
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |