Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F000805465.1_202014-
12-19] 878 sequences; 21,919,346 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq248 163 1e-35
seq407 123 1e-23
seq125 120 2e-22
seq83 91.5 7e-14
>seq248
Length=29684
Score = 163 bits (180), Expect = 1e-35
Identities = 321/473 (68%), Gaps = 4/473 (1%)
Strand=Plus/Plus
Query 25892 GGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATC 25951
||| |||||||| |||| | |||| || || || ||| || | |||||||| |
Sbjct 7088 GGAGAGAATAAAGTCCAAGTGCCGTTTTCTTCGACACGCTTCATGAAAAGATCTGGAACC 7147
Query 25952 CACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGA 26011
|| | ||| |||||||||||||| | |||||||| || |||||||||||| | |
Sbjct 7148 CATAGAGCAGGGAATAAATCTCTCGCACGGATTTCTTCCTTACCGTGATTCTTTCTAATG 7207
Query 26012 TCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTT 26071
|| | ||| || || ||||| | ||||||||| || ||||| | |||||| ||| |
Sbjct 7208 TCGATGAAGTCGAAGATATCAGCGTGCCATGGCTCCAAATATAGAGCAAAGGCACCAGGT 7267
Query 26072 CTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGA 26131
|| || |||||||| || || || | ||||| | ||||| || | ||| |||
Sbjct 7268 CTCTTGTTACCACCTTGGTCAACATAACGGGCAGTATTGTTGAAGACACGGATCATAGGA 7327
Query 26132 ACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCG 26191
| ||| || | ||| |||||||| | | ||| | || || || | | ||| | |
Sbjct 7328 ATTAACCCGTTAGAAGTCCCGTTTGTACCAGCAATGTAAGAGCCGGTTGCACGAATGTTG 7387
Query 26192 TGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATC--TGAAACTG 26249
|| ||| | ||| || || ||||| ||| ||||| ||||| || | ||| |
Sbjct 7388 TGGATATGTAGACCAATACCTCCAGCAGTTTTAGAAATCAAAGCACATTCCTTCAAA--G 7445
Query 26250 TATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATT 26309
||||| |||| |||| ||| |||| | |||||| | | ||| ||||| || || | ||
Sbjct 7446 TATCGTAAATACCTTCAATGGAATCATCCTTCATTGCAACTAAGAAACAGGAGGACATTT 7505
Query 26310 GCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATAT 26362
| | | | || || | || ||||| || || | ||||||||| | |||
Sbjct 7506 GAGGCTTTGGAGTACCAGCGTTGAATAAAGTTGGAGAGGCATGAGTAAAGTAT 7558
>seq407
Length=15551
Score = 123 bits (136), Expect = 1e-23
Identities = 311/473 (66%), Gaps = 0/473 (0%)
Strand=Plus/Plus
Query 25890 TTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAA 25949
||||| ||||||| ||| |||||| || || || ||| || | ||| ||||
Sbjct 5695 TTGGAGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAA 5754
Query 25950 TCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTA 26009
|||| | ||| || |||||||| || | ||||| ||||| ||||| ||||| | |
Sbjct 5755 TCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAA 5814
Query 26010 GATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTT 26069
||| | |||||||| ||||| | ||||||||||| | || | ||||| |||
Sbjct 5815 TATCAATAAAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAG 5874
Query 26070 TTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTG 26129
|||||| ||||| || || || || | ||||| | ||||||||| | ||| |
Sbjct 5875 GTCTTTTATTACCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACGAATCATAG 5934
Query 26130 GAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATAT 26189
||| ||| || | ||| |||||||| | | ||| | || || || || | ||| |
Sbjct 5935 GAATTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTTGAACGAATGT 5994
Query 26190 CGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTG 26249
|| ||| | ||| || |||||||| ||| ||||| ||||| || | |
Sbjct 5995 TATGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGG 6054
Query 26250 TATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATT 26309
| ||| |||| || | || || | ||||| | | || |||||||| || | ||
Sbjct 6055 TGTCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTT 6114
Query 26310 GCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATAT 26362
| | | | || || | ||| || || || || | || |||||| |||||
Sbjct 6115 GAGGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTGAGTAAAATAT 6167
Score = 89.7 bits (98), Expect = 3e-13
Identities = 317/492 (64%), Gaps = 14/492 (3%)
Strand=Plus/Plus
Query 24695 GTTCTAAGATAATACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAAAAATGCATTGAT 24754
||||| | ||| ||||| || || |||||| ||||||||| |||||||||||||| |
Sbjct 4521 GTTCTCAAATAGTACATACCGGTCTTCAATCCCTTCTTCCATCCGTAAAAATGCATACTT 4580
Query 24755 GTTAGTTTTGCAATGTTTGCTGATTCTAAAAACAAGTTCATCGATTGAGCTTGG-CAA-- 24811
|||||||| | || ||| | ||| ||||| |||| || |||| ||| |||
Sbjct 4581 GTTAGTTTACCCATAGTTGGGGCACGTAAGAACAAATTCAAAGAATGAGATTGATCAATA 4640
Query 24812 ---ACAAAACGTTGTCTATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATATCGTAA 24868
||| |||| ||| || || | || |||||| || || || || || ||
Sbjct 4641 TAGACAGAACG------ATCGGCTGCCATGTTAATGATAGTCTTTTGTGAAATTTCCCAA 4694
Query 24869 GCTGTTTTGTATCTCTCTTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTGATCCA 24928
| || |||||| || || | || ||||| | ||| | ||||| || |||
Sbjct 4695 ACAGTCTTGTATAAGTCCTTCAATTCTTGTGGAACATTTGGTAAGCCTTGAATGGAGCCA 4754
Query 24929 TTTTCTCTCAATAGATTCAATCTCATATTCGGTGTCCAAAGAT-TAATTTTTTCAAGATC 24987
|||| | | | |||| | | ||||| | ||||| | ||| | |||| ||
Sbjct 4755 TTTTGTGTAATCAGATACTGTTTCATACCCTCATCCCAAATACCTAAATCAACCAAG-TC 4813
Query 24988 TCTAATCAAGTGTTTATTTATGATAATAAATTCTCCAGACAAAACTCTTCTTATTGATAA 25047
| | |||| || | | ||||| || || || || | | | |
Sbjct 4814 ACGCAGTAAGTAAGGGTTCACAACCTGGAATTCACCGGATAAGACACGACGGGAGTACAT 4873
Query 25048 GTTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGT 25107
|| ||||||| |||||| ||||||||||||| || || ||||| || || ||||| ||
Sbjct 4874 ATTGGAAGTGACTGGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGATGCAGT 4933
Query 25108 TGGCATTAATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTTTAA 25167
|||||| ||| || | |||||||| | ||||| || | || |||| | ||||
Sbjct 4934 AGGCATTGGTGCCATGGTCAAGGAATTTCTAATACCATGCTTCATGATATCTTTTCTTAA 4993
Query 25168 TTTATCCCAATC 25179
| ||||||||
Sbjct 4994 GGTGTCCCAATC 5005
>seq125
Length=52383
Score = 120 bits (132), Expect = 2e-22
Identities = 287/434 (66%), Gaps = 0/434 (0%)
Strand=Plus/Plus
Query 25930 CTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTC 25989
|| ||| || | ||| |||||||| | ||| || |||||||| || | ||||||||
Sbjct 7930 CTTCATGAAAAGATCGGGAATCCATAGAGCAGGGAACAAATCTCTTGCACGAATTTCTTC 7989
Query 25990 TTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAA 26049
|| || ||| ||||| | | ||| | || || || || |||| |||||||| || ||
Sbjct 7990 CTTACCATGAGTCTTTCTGATATCGACAAAGTCGAAGATGTCTGCATGCCATGGCTCCAA 8049
Query 26050 ATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTC 26109
| | ||||| ||| ||| || |||||||| || ||||| | |||||| |
Sbjct 8050 GAAAAGGGCAAAGGCACCGGGTCTCTTGTTACCACCTTGGTCCACGTAACGTGCAGTGTT 8109
Query 26110 ATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTT 26169
||||| || | ||| |||| || || ||||| ||||| || | ||| |
Sbjct 8110 GTTGAAGACACGGATCATGGGAATCAACCCGTTTGAAGTACCGTTGGTACCTGCAATATA 8169
Query 26170 GGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAAT 26229
|| ||||| || | ||||| || ||||| ||| | ||||| || || |||||
Sbjct 8170 AGAGCCTGTGGAACGAATATTGTTGATATGAAGACCAACACCACCTGCAGTCTTGGAAAT 8229
Query 26230 AGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAA 26289
||||| ||| | || ||| |||| |||| ||| || | ||||| | |
Sbjct 8230 CATGGCACACTCTTTCAAAGTGTCGTAAATACCTTCAATGGAGTCGTCCTTCATGGCAAT 8289
Query 26290 TAAAAAACAAGAAGATAATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGC 26349
| ||||||||||| | ||| | ||| | || || | |||||||| ||| || | |||
Sbjct 8290 CAGGAAACAAGAAGACATTTGAGGATGTGGCGTACCGGCATTAAATAGTGTGGGGGAAGC 8349
Query 26350 ATGAGTATAATATC 26363
|| || | ||||
Sbjct 8350 GTGGGTGAAGTATC 8363
>seq83
Length=68286
Score = 91.5 bits (100), Expect = 7e-14
Identities = 213/315 (68%), Gaps = 10/315 (3%)
Strand=Plus/Minus
Query 25048 GTTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGT 25107
|||||| || | |||||| ||||||||||||| || | ||||| ||||| || || ||
Sbjct 61298 GTTTGAGGTCACTGGTTCGAAACATTCATTATAACCAAGAATTTGGGAAGTTGAGGCGGT 61239
Query 25108 TGGCATTAATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTTTAA 25167
||||||| ||| || | || ||||| || |||| ||||||||| || | | ||||
Sbjct 61238 TGGCATTGGTGCCATAGTCAAAGAGTTTCTTAACCCATGTTTAACAATGTCCTTTCTTAA 61179
Query 25168 TTTATCCCAATCTAAATTATTATCTAACTCG-ATATCGTTATCATATAAATCAAATTGTA 25226
| ||||| || | | | || | | || |||| || || ||| |||||||
Sbjct 61178 GGTTTCCCAGTCCCACAT----GCCAAATGGTTTAGCGTT-CCACAT--ATCGAATTGTA 61126
Query 25227 ACAATCCACTT-GCTGCAGGCGATTGATCAAAAGTTGAATATTTACCTTTTGTTATTGCC 25285
| ||| | ||| | || || || |||||||| ||||||||||||| | || |||
Sbjct 61125 A-AATACCCTTGGAAGCTGGAGAACCTTCAAAAGTAGAATATTTACCTTCTTTTTGGGCC 61067
Query 25286 ATATCTTTTGATTGCTCTAACGCAGCATAATACATATTTTCAAAAATCGCTTTGTTTAAA 25345
| || || || | | ||||| || ||| |||| || || |||||||| |
Sbjct 61066 AATTCACAGGAGGCTTCAAGAGTAGCATGGTAAATAGTTTCGAAGATTTGTTTGTTTAGA 61007
Query 25346 AACTTAGCTTTTTCT 25360
| ||||| ||||
Sbjct 61006 GTTTGAGCTTCTTCT 60992
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253037292313850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |