Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F000805465.1_202014- 12-19] 878 sequences; 21,919,346 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq72 174 3e-38 seq60 161 2e-34 seq8 150 3e-31 seq165 149 1e-30 seq405 145 1e-29 seq2 145 1e-29 seq43 143 5e-29 seq32 143 5e-29 seq365 120 5e-22 >seq72 Length=71373 Score = 174 bits (192), Expect = 3e-38 Identities = 173/224 (77%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896 || ||||||||||| | || || |||||||||||||| | || || ||| || || Sbjct 32154 ATGATACCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAG 32095 Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956 || || || | || |||| |||||||| ||||||||||| || ||||| ||||||||| Sbjct 32094 TCGGACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCA 32035 Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016 ||||| || |||||||| ||||| || || ||| ||||| || || || || ||| Sbjct 32034 GGTGGGATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGAT 31975 Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAA 172060 || ||||||||||| |||||||||||||| || || |||| ||| Sbjct 31974 TCAACTTCTAGAGTGATGGTTTTACCAGTCAAAGTCTTAACGAA 31931 >seq60 Length=75461 Score = 161 bits (178), Expect = 2e-34 Identities = 179/239 (75%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893 ||| || ||||||||| | || || || || |||||||| | ||| || || || Sbjct 10608 TTCTTACCACCACCTCTCAATCTCAAAACCAAGTGTAAAGTGGACTCCTTTTGGATGTTG 10549 Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953 || || || |||| || |||| |||||||| ||||||||||| || ||||| |||||| Sbjct 10548 TAGTCAGACAAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGG 10489 Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013 |||||||| || ||||| || ||||| || ||| || ||||| ||||| ||||| Sbjct 10488 TCAGGTGGAATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCTGAA 10429 Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 ||||| ||||| || ||||| || ||||| ||||| || || | ||| || ||||| || Sbjct 10428 GATTCAACTTCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 10370 >seq8 Length=154085 Score = 150 bits (166), Expect = 3e-31 Identities = 164/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896 || ||||||||||| | || || |||||||||||||| | || || ||||| || Sbjct 41274 ATGATACCACCTCTCAATCTCAAAACTAAATGTAAAGTGGATTCCTTTTGGATATTGTAG 41215 Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956 || || || | || |||| |||||||| ||||||||||| |||||||| ||||||||| Sbjct 41214 TCAGACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCA 41155 Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016 || || || ||||| || ||||| || || || ||||| || || || || ||| Sbjct 41154 GGAGGAATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATGGTGTCAGAAGAT 41095 Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 172054 || ||||| | ||| ||||| |||||||| || ||||| Sbjct 41094 TCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTTTT 41057 >seq165 Length=43850 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || || || ||||| || |||| |||||| ||| |||||||| Sbjct 15805 ATACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCA 15864 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || |||| |||| ||| ||||| |||||||| ||||| ||||| || || Sbjct 15865 GACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGA 15924 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || ||||| |||||| |||| || || ||||| || || ||||| Sbjct 15925 GGAATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCA 15984 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 || ||||| || || || || || |||| ||||| | ||| || ||||| Sbjct 15985 ACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 16034 Score = 113 bits (124), Expect = 8e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || || || || || | ||||| || || ||| || ||||| Sbjct 16033 ATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAATCA 16092 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | | || |||| || | || ||||| ||||| || ||||| ||||| || || Sbjct 16093 GACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGA 16152 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || ||||| ||||| || || || || ||||| || ||||| Sbjct 16153 GGGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCA 16212 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| | || ||||||||||| || || || |||| || |||||||| Sbjct 16213 ACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 16262 Score = 113 bits (124), Expect = 8e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || || || || || | ||||| || || || || || || Sbjct 16261 ATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCA 16320 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || || | || |||| || || || ||||| ||||| || ||||| ||||| || || Sbjct 16321 GACAAGGTTCTACCGTCTTCTAACTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGA 16380 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || ||||| ||||| || || || || ||||| || ||||| Sbjct 16381 GGGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCA 16440 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| | || ||||||||||| || || || || | ||| |||||||| Sbjct 16441 ACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 16490 >seq405 Length=15789 Score = 145 bits (160), Expect = 1e-29 Identities = 173/234 (74%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 171831 AGTTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATA 171890 ||||| || | |||||||| |||| || || || || | ||| | ||| || ||| Sbjct 232 AGTTTAAT--TGCCACCTCTTAGTCTTAGGACCAAGTGCAGAGTGGACTCCTTTTGAATG 175 Query 171891 TTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGT 171950 ||||| || || |||| || |||| |||| ||| ||||| |||||||| || |||||| Sbjct 174 TTATAGTCCGACAAAGTTCTGCCGTCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGT 115 Query 171951 TGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCT 172010 ||||| || || || || |||||||| ||||| ||| | |||||||| || || || Sbjct 114 TGGTCCGGAGGAATGCCCTCTTTATCCTGTATCTTACTCTTTACATTGTCGATCGTGTCG 55 Query 172011 GACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATC 172064 || || || || || | ||||||||| ||||| ||||| || || | ||| ||| Sbjct 54 GAGGACTCGACCTCCAAAGTAATGGTCTTACCGGTTAAAGTCTTGACGAAAATC 1 >seq2 Length=186594 Score = 145 bits (160), Expect = 1e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896 || ||||||||||| | || || ||||| || ||||| | ||||| ||| || || Sbjct 30342 ATGATACCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAG 30283 Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956 || || || | || |||| |||||||| ||||||||||| || ||||| ||||||||| Sbjct 30282 TCAGACAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCA 30223 Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016 ||||| || ||||| || ||||| || || || ||||| ||||| || || ||| Sbjct 30222 GGTGGGATACCTTCCTTGTCTTGAATCTTTGACTTGACATTGTCAATAGTGTCAGAAGAT 30163 Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 172054 || ||||| | ||| ||||| |||||||| || || || Sbjct 30162 TCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTT 30125 >seq43 Length=88948 Score = 143 bits (158), Expect = 5e-29 Identities = 166/224 (74%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896 || ||||||||||| | || || || ||||||||||| | || || || || || Sbjct 27050 ATGATACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAG 26991 Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956 || |||| || || |||| |||||||| ||||||||||| || ||||| ||||| ||| Sbjct 26990 TCAGATAGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCA 26931 Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016 ||||| || ||||| || ||||| || || || ||||| || || || || ||| Sbjct 26930 GGTGGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGAT 26871 Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAA 172060 || ||||| | ||| ||||| |||||||| || || |||| ||| Sbjct 26870 TCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAA 26827 >seq32 Length=102181 Score = 143 bits (158), Expect = 5e-29 Identities = 175/239 (73%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893 ||| || ||||||||| | || || || || |||| ||||| || || || || Sbjct 8633 TTCTTACCACCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTG 8574 Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953 || || || |||| || | || |||||||| ||||||||||| || ||||| |||||| Sbjct 8573 TAGTCGGACAAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGG 8514 Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013 |||||||| || ||||| || ||||| || || || ||||| ||||| || || Sbjct 8513 TCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAA 8454 Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 ||||| ||||| || ||||| || ||||| ||||| || || | ||| || ||||| || Sbjct 8453 GATTCAACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8395 >seq365 Length=19284 Score = 120 bits (132), Expect = 5e-22 Identities = 335/505 (66%), Gaps = 13/505 (3%) Strand=Plus/Minus Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891 |||||||| ||||||||| | |||||||| ||||| || || || | || || || Sbjct 18957 TTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTACCGGCCAAGGAGATGTTT 18898 Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATA-CATATAA 38950 | ||| ||||| || || |||| | || || ||||| | | || | | | || || Sbjct 18897 TCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCT-TGTTACCGAAAGCAACCAA 18839 Query 38951 TAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATAA 39010 | ||| ||||| || || ||||| ||||| |||||| ||| |||||||| | || Sbjct 18838 CAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTCAGCGTTCATACCTAGCAA 18779 Query 39011 TTTAAATGGTAATGCATCATCAATAAAT-TCttt-ttctatttctacagcttgtttaatt 39068 || |||||| || || ||| || | ||||| ||| ||||| ||||| | | | Sbjct 18778 AGCAACTGGTAAGGCGTC--CAAGAAGTATCTTTGTTCAATTTCCACAGCCTCGGTGACA 18721 Query 39069 atcataattatattattttttgataa--tttatatttaatatgattcgcatataGTAAAC 39126 || | || | || | | | ||| | || | ||| || | | || | Sbjct 18720 ATTTT--TTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAATGG---GCGAACAACAAGC 18666 Query 39127 ATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATC 39186 ||||||| || || || ||||||||||| ||| | || ||||| || ||| ||||| | Sbjct 18665 ATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTTAAAC 18606 Query 39187 CTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATA 39246 | ||||| | ||||||||||| | ||| || || || ||||| || || || || | Sbjct 18605 CGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAAAAGA 18546 Query 39247 TACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAA 39306 ||| || | | ||||| || | || |||| | ||||||| | | | ||| || Sbjct 18545 CACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCAGCGTCTTGAA 18486 Query 39307 TCCAATTTATGGCCCAATCTGCTTT 39331 |||| ||| ||||| || || || Sbjct 18485 TCCATCTTAAAGCCCATTCGGCCTT 18461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905126066132400