Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F000805465.1_202014-
12-19] 878 sequences; 21,919,346 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq165 125 6e-24
seq405 118 8e-22
seq60 118 8e-22
seq32 100 2e-16
seq2 93.3 3e-14
seq72 82.4 6e-11
>seq165
Length=43850
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||||||||| ||||||||| ||||||| || || || ||| | || || || |
Sbjct 16034 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 15975
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| ||| | | | | || ||| || ||| || || ||||| | || |||||
Sbjct 15974 GACACTATTGACAACGTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 15915
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
|| ||| | |||| ||| ||||| || ||||| |||| | ||| || | || || |||
Sbjct 15914 CAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 15855
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
||||| || |||||||||||||| |||||||||||||| |||| ||
Sbjct 15854 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 15808
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| ||||| ||||| ||||| || || |||||||| || | ||| || || |
Sbjct 16490 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 16431
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| ||| | | || || || ||| || || ||||| | || |||||
Sbjct 16430 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 16371
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
|| ||| | || | ||| ||||| ||| | || |||| | ||| || | |||||||||
Sbjct 16370 CAAAGATTGATCTTTGCCGGTAAGCAGTTAGAAGACGGTAGAACCTTGTCTGACTACAAC 16311
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
|| |||||||| ||||| | ||| |||||||||||||| |||| ||
Sbjct 16310 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 16264
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| || ||||| || ||||| || || |||||||| || | ||| || || |
Sbjct 16262 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 16203
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| ||| | | || || || ||| || || ||||| | || |||||
Sbjct 16202 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 16143
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
|| ||| | || | ||| ||||| ||||| || |||| | ||| || | || ||||||
Sbjct 16142 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAAC 16083
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
||||| ||||| ||||| | ||| |||||||||||||| |||| ||
Sbjct 16082 ATTCAGAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 16036
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/226 (70%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||||||||| ||||||||| ||||||| || || || ||| | || || || |
Sbjct 15806 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 15747
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| ||| | | | | || || || ||| || || ||||| | || || |||
Sbjct 15746 GACACTATTGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAG 15687
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
|| ||| | |||| ||| ||||| || || || || | | ||| || ||||||||||
Sbjct 15686 CAAAGATTGATTTTTGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAAT 15627
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGG 107781
|||||||||||||| || | ||| | || ||||| | |||||||
Sbjct 15626 ATTCAAAAGGAGTCCACTCTTCACCTTGTCTTGAGGT--CGAGGGG 15583
>seq405
Length=15789
Score = 118 bits (130), Expect = 8e-22
Identities = 161/225 (72%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 107562 ATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGCGATACT 107621
||||| ||||| |||||||| || || |||||||| | || ||| | ||| ||
Sbjct 2 ATTTTCGTCAAGACTTTAACCGGTAAGACCATTACTTTGGAGGTCGAGTCCTCCGACACG 61
Query 107622 GTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGCAGAGA 107681
||| | | ||||| ||||| |||||||| ||| | || ||| || |||||
Sbjct 62 ATCGACAATGTAAAGAGTAAGATACAGGATAAAGAGGGCATTCCTCCGGACCAACAGAGG 121
Query 107682 CTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAA 107741
| |||| ||| ||||| || ||||| |||| || ||| || ||||||| |||||||||
Sbjct 122 TTGATTTTTGCCGGTAAGCAACTGGAAGACGGCAGAACTTTGTCGGACTATAACATTCAA 181
Query 107742 AAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAAT 107786
|||||||| || ||||| |||| | ||| | |||| || |||
Sbjct 182 AAGGAGTCCACTCTGCACTTGGTCCTAAGACTAAGAGGTGGCAAT 226
>seq60
Length=75461
Score = 118 bits (130), Expect = 8e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612
|| ||||||||||| ||||| |||||||| || || || |||||| | ||| || ||
Sbjct 10370 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCT 10429
Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672
|| ||| | | | | || || |||||| || || ||||| | || ||
Sbjct 10430 TCAGACACTATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGAC 10489
Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732
|| || ||| | || | ||| ||||| || |||| |||| || ||| || | ||||||
Sbjct 10490 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTAC 10549
Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
||||| ||||||||||| || || ||| |||| ||||||||| |||| ||
Sbjct 10550 AACATCCAAAAGGAGTCCACTTTACACTTGGTTTTGAGATTGAGAGGTGG 10599
>seq32
Length=102181
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612
|| ||||||||||| ||||| |||||||| || || || |||||| | ||| || ||
Sbjct 8395 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 8454
Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672
|| ||| | | | | || || ||||| || || ||||| | || ||
Sbjct 8455 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 8514
Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732
|| || ||| | || | ||| ||||| || |||| || | | ||| || | ||||||
Sbjct 8515 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 8574
Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
||||| |||||||| ||||| | ||| |||| ||||||||| |||| ||
Sbjct 8575 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 8624
>seq2
Length=186594
Score = 93.3 bits (102), Expect = 3e-14
Identities = 152/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 107564 TTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGCGATACTGT 107623
||||||||| ||||| || || || ||||| || | ||| || || || ||| |
Sbjct 30118 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 30177
Query 107624 CGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACT 107683
| | | || || ||||||| || || ||||| | || || || || ||| |
Sbjct 30178 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 30237
Query 107684 TATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAAAA 107743
|| | ||| ||||| || |||| |||| | ||| || | |||||||||||||||||
Sbjct 30238 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAA 30297
Query 107744 GGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
|| || || |||||| | || ||||||||| |||| ||
Sbjct 30298 AGAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 30336
>seq72
Length=71373
Score = 82.4 bits (90), Expect = 6e-11
Identities = 149/218 (68%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 107565 TTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGCGATACTGTC 107624
|| || || ||||| || || |||||||| || | ||| || || || || |
Sbjct 31931 TTCGTTAAGACTTTGACTGGTAAAACCATCACTCTAGAAGTTGAATCTTCTGACACCATT 31990
Query 107625 GGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACTT 107684
| | | || ||| |||||| || |||||||| | || || || || ||| |
Sbjct 31991 GACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTG 32050
Query 107685 ATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAAAAG 107744
|| | ||| ||||| || |||| |||| | ||| || | ||||||||||||||||||
Sbjct 32051 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAAG 32110
Query 107745 GAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
|| || || || || | || ||||||||| |||| ||
Sbjct 32111 GAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 32148
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398872531768942
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |