Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F000805465.1_202014-
12-19] 878 sequences; 21,919,346 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq8 123 6e-23
seq32 122 2e-22
seq2 120 7e-22
seq165 114 3e-20
seq60 107 5e-18
seq72 104 6e-17
seq43 95.1 3e-14
>seq8
Length=154085
Score = 123 bits (136), Expect = 6e-23
Identities = 153/208 (74%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237
||||| |||||| | || || || || |||||||||||||| ||| ||||||||| |
Sbjct 41050 TTTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCAT 41109
Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297
|| || ||| |||||||||||| || ||||| ||| || ||| |||||| |
Sbjct 41110 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAACAAAGATT 41169
Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357
||||| || || ||||| |||||||| || || || ||| | || ||||| |||| ||
Sbjct 41170 AATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAATATCCAAAA 41229
Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGA 206385
|| || ||| | || | |||||||||
Sbjct 41230 GGAATCCACTTTACATTTAGTTTTGAGA 41257
>seq32
Length=102181
Score = 122 bits (134), Expect = 2e-22
Identities = 142/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || || || || ||||||| ||| ||||||||| | || || |||
Sbjct 8422 ACCGGTAAGACTATTACCCTGGAAGTTGAATCTTCTGACACTATTGACAATGTCAAGTCC 8481
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| ||||| || ||||| ||| || ||| |||||| | ||||| || || |||
Sbjct 8482 AAGATCCAAGACAAGGAAGGTATTCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 8541
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| ||||||||||| || |||||| |||| |||||| |||| || || |||||||| |||
Sbjct 8542 CAATTGGAAGATGGTAGAACTTTGTCCGACTACAACATCCAAAAGGAATCTACTCTACAC 8601
Query 206374 CTTGTTTTGAGA 206385
| || ||||||
Sbjct 8602 TTGGTCTTGAGA 8613
>seq2
Length=186594
Score = 120 bits (132), Expect = 7e-22
Identities = 152/208 (73%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 206179 TTTTG-CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGT 206237
||||| ||| || | || || || || |||||||||||||| ||| ||||||||| |
Sbjct 30118 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 30177
Query 206238 CGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACT 206297
|| || ||| |||||||||||| || ||||| || || ||| |||||| |
Sbjct 30178 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 30237
Query 206298 TATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAA 206357
||||| || || ||||| |||||||| || || || ||| | || |||||| | || ||
Sbjct 30238 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAA 30297
Query 206358 AGAGTCTACTCTTCACCTTGTTTTGAGA 206385
||| || ||| | ||| | || ||||||
Sbjct 30298 AGAATCCACTTTGCACTTAGTCTTGAGA 30325
>seq165
Length=43850
Score = 114 bits (126), Expect = 3e-20
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || | || || ||||| || || |||||||| ||| ||| ||
Sbjct 16487 CAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCCGAT 16428
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| || |||||||| || ||||| || || || |||
Sbjct 16427 ACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAACAA 16368
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||| | ||||| ||||| |||||||| ||||| || || || ||| | || |||||| ||
Sbjct 16367 AGATTGATCTTTGCCGGTAAGCAGTTAGAAGACGGTAGAACCTTGTCTGACTACAACATC 16308
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
|| || || |||||||||||| | || ||||||
Sbjct 16307 CAAAAGGAATCTACTCTTCACTTGGTGTTGAGA 16275
Score = 109 bits (120), Expect = 1e-18
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| || || | || || ||||| || || |||||||| ||| ||| ||
Sbjct 16259 CAGATCTTTGTTAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCCGAT 16200
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| || |||||||| || ||||| || || || |||
Sbjct 16199 ACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAACAA 16140
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
||| | ||||| ||||| |||||| | ||||| || || || || | ||||||||| |
Sbjct 16139 AGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAACATT 16080
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385
||||| || |||||||||||| | || ||||||
Sbjct 16079 CAGAAGGAATCTACTCTTCACTTGGTGTTGAGA 16047
Score = 102 bits (112), Expect = 2e-16
Identities = 143/201 (71%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
|||||| || ||||| || || || || | || || ||| ||| ||||| | ||
Sbjct 15792 CAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGACACTATTGACAA 15733
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| || |||||||| || ||||| ||| || ||| |||||| | || ||
Sbjct 15732 CGTTAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAGCAAAGATTGATTTT 15673
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||||| ||||| | |||||||| || || || | || ||||| | || || |||||
Sbjct 15672 TGCCGGTAAGCAACTAGAAGATGGTAGAACGCTGTCGGACTACAATATTCAAAAGGAGTC 15613
Query 206364 TACTCTTCACCTTGTTTTGAG 206384
|||||||||||||| |||||
Sbjct 15612 CACTCTTCACCTTGTCTTGAG 15592
Score = 87.8 bits (96), Expect = 4e-12
Identities = 143/204 (70%), Gaps = 4/204 (2%)
Strand=Plus/Minus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
|||||| || ||||| || || || || | || || ||| ||| ||||| | ||
Sbjct 16020 CAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCCGACACTATTGACAA 15961
Query 206244 AGT--AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATC 206301
|| |||| |||| ||||||| || ||||| ||| || || |||||| | ||
Sbjct 15960 CGTCAAAAGTAAAA--TTCAAGACAAGGAAGGTATTCCTCCAGATCAACAAAGATTGATT 15903
Query 206302 TTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAG 206361
|| ||||| ||||| ||||||| || || || || | ||||| ||| | |||||||||
Sbjct 15902 TTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAACATTCAGAAAGAG 15843
Query 206362 TCTACTCTTCACCTTGTTTTGAGA 206385
||||| | || | || ||||||
Sbjct 15842 TCTACGTTGCATTTGGTGTTGAGA 15819
>seq60
Length=75461
Score = 107 bits (118), Expect = 5e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || || || || | ||||| ||| ||| ||||| | || || |||
Sbjct 10397 ACCGGTAAGACTATTACCCTTGAAGTTGAATCTTCAGACACTATTGACAATGTCAAGTCT 10456
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||||||||| || ||||| ||| || ||| |||||| | ||||| || || |||
Sbjct 10457 AAGATTCAAGACAAGGAAGGTATTCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 10516
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| |||||||| || || |||||| | || |||||| |||| || ||||| ||| | |||
Sbjct 10517 CAATTGGAAGACGGCAGAACTTTGTCTGACTACAACATCCAAAAGGAGTCCACTTTACAC 10576
Query 206374 CTTGTTTTGAGA 206385
| |||||||||
Sbjct 10577 TTGGTTTTGAGA 10588
>seq72
Length=71373
Score = 104 bits (114), Expect = 6e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || ||||| |||||| | ||||| ||| ||||||||| | || || ||
Sbjct 31946 ACTGGTAAAACCATCACTCTAGAAGTTGAATCTTCTGACACCATTGACAATGTCAAATCC 32005
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||||||||| |||||||| || || ||| |||||| | ||||| || || |||
Sbjct 32006 AAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTGATCTTTGCTGGTAAG 32065
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| |||||||| || || || ||| |||| |||||| | || || || || ||| | ||
Sbjct 32066 CAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAAGGAATCCACTTTACAT 32125
Query 206374 CTTGTTTTGAGA 206385
| || ||||||
Sbjct 32126 TTAGTCTTGAGA 32137
>seq43
Length=88948
Score = 95.1 bits (104), Expect = 3e-14
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253
|| || || || |||||||||||||| ||| ||||||||| | || || |||
Sbjct 26842 ACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATTGACAATGTCAAGTCC 26901
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| ||||| || ||||| || || || |||||| | ||||| || || |||
Sbjct 26902 AAGATCCAAGACAAGGAAGGTATCCCACCTGATCAACAAAGATTGATCTTTGCTGGTAAG 26961
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| |||||||| || || ||| | | || |||||| |||| || || || ||| | ||
Sbjct 26962 CAATTGGAAGACGGTAGAACTCTATCTGACTACAACATCCAAAAGGAATCCACTTTACAT 27021
Query 206374 CTTGTTTTGAGA 206385
| || ||||||
Sbjct 27022 TTGGTCTTGAGA 27033
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181807505254638
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |