Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F000805465.1_202014- 12-19] 878 sequences; 21,919,346 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq32 109 4e-19 seq2 93.3 3e-14 seq72 91.5 1e-13 seq165 89.7 4e-13 seq60 82.4 6e-11 >seq32 Length=102181 Score = 109 bits (120), Expect = 4e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 106257 AAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCC 106316 || ||||||||||| || || || || || || ||||| |||||| ||||| ||| | Sbjct 8395 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 8454 Query 106317 GGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGAT 106376 || || ||| | | || || || || ||||| ||||| | || ||| Sbjct 8455 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 8514 Query 106377 CAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTAC 106436 |||||||| | || | ||| || || ||||| |||||| || |||| || ||| ||| Sbjct 8515 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 8574 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 ||||| ||||| |||||||| ||||| || || ||||| || |||| || Sbjct 8575 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 8624 >seq2 Length=186594 Score = 93.3 bits (102), Expect = 3e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 106268 TTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGCGATTCTGT 106327 |||||| || || |||||||| |||||||| || ||||| ||| | || || | Sbjct 30118 TTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTAT 30177 Query 106328 TGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCT 106387 || | | || || ||| ||| ||||| ||||| | || ||| |||||||| | Sbjct 30178 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATT 30237 Query 106388 TATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAACATACAAAA 106447 || | ||| || || ||||| ||||| || ||| || || |||||||| ||||| Sbjct 30238 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAA 30297 Query 106448 AGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 |||||| || | || ||||| ||||| || |||| || Sbjct 30298 AGAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 30336 >seq72 Length=71373 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 106269 TTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGCGATTCTGTT 106328 || ||||| || |||||||| || ||||| || | ||| ||| | || | || Sbjct 31931 TTCGTTAAGACTTTGACTGGTAAAACCATCACTCTAGAAGTTGAATCTTCTGACACCATT 31990 Query 106329 GGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCTT 106388 | | | || ||| || ||| ||||||||||| | || ||| |||||||| | Sbjct 31991 GACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTG 32050 Query 106389 ATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAACATACAAAAA 106448 || | ||| || || ||||| ||||| || ||| || ||| |||||||| ||||| Sbjct 32051 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAAG 32110 Query 106449 GAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 ||||| || |||||||||| ||||| || |||| || Sbjct 32111 GAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 32148 >seq165 Length=43850 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||||||||| || ||||| | || || ||||| || ||| | || ||| | | Sbjct 16034 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 15975 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || || ||| | | || ||| |||||| ||||| ||||| | || |||||| Sbjct 15974 GACACTATTGACAACGTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 15915 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||| | |||| ||| || || ||| | ||||| || ||| || ||||| ||| Sbjct 15914 CAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 15855 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || || ||||| ||||| | ||||| || ||||| || |||| || Sbjct 15854 ATTCAGAAAGAGTCTACGTTGCATTTGGTGTTGAGATTGAGAGGTGG 15808 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| || |||||||| || ||||| || || ||||| || ||||| ||| | | Sbjct 16262 ATGCAGATCTTTGTTAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 16203 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | | | | | || || |||||| ||||| ||||| | || |||||| Sbjct 16202 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 16143 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||| | || | ||| || || || ||||||| || ||| || ||||||||| Sbjct 16142 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAAC 16083 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || || || |||||||| || || || || ||||| || |||| || Sbjct 16082 ATTCAGAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 16036 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| ||||| || || || ||||| || || ||||| || ||||| ||| | | Sbjct 16490 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 16431 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| | | | | | || || |||||| ||||| ||||| | || |||||| Sbjct 16430 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 16371 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||||| | || | ||| || || || |||||||| || ||| || || |||||| Sbjct 16370 CAAAGATTGATCTTTGCCGGTAAGCAGTTAGAAGACGGTAGAACCTTGTCTGACTACAAC 16311 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || ||||| |||||||| || || || || ||||| || |||| || Sbjct 16310 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 16264 >seq60 Length=75461 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 106257 AAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCC 106316 || ||||||||||| || || || || || || ||||| |||||| | ||| ||| | Sbjct 10370 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCT 10429 Query 106317 GGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGAT 106376 || || ||| | | || || || ||| ||||| ||||| | || ||| Sbjct 10430 TCAGACACTATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGAC 10489 Query 106377 CAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTAC 106436 |||||||| | || | ||| || || ||||| ||||| | |||| || || ||| Sbjct 10490 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTAC 10549 Query 106437 AACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 ||||| ||||| || || || |||| || || ||||| || |||| || Sbjct 10550 AACATCCAAAAGGAGTCCACTTTACACTTGGTTTTGAGATTGAGAGGTGG 10599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402325294821824