Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F000805465.1_202014-
12-19] 878 sequences; 21,919,346 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq125 123 3e-23
seq248 122 1e-22
seq206 109 6e-19
>seq125
Length=52383
Score = 123 bits (136), Expect = 3e-23
Identities = 337/511 (66%), Gaps = 10/511 (2%)
Strand=Plus/Minus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTG----AGACG 53248
||||||| || ||| | ||||| ||||| ||| || || ||||||| ||||
Sbjct 8438 TCATGCGTGTGGCCCTAGGTATTCACGGCAGCGA-TAT---CGAGTCCGTGCTGAAGACT 8383
Query 53249 TACGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGT 53308
||| |||| ||| | ||||| || ||||| | || || || || || || |||
Sbjct 8382 TACAACTTGATGTCGTTGAGATACTTCACCCACGCTTCCCCCACACTATTTAATGCCGGT 8323
Query 53309 ACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGAC 53368
||| || ||||| ||||| || |||||| | || |||||||| ||||| || ||
Sbjct 8322 ACGCCACATCCTCAAATGTCTTCTTGTTTCCTGATTGCCATGAAGGACGACTCCATTGAA 8263
Query 53369 GGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGT 53428
|| || ||||| || | || ||||||||| || |||||| | |||||| | |||
Sbjct 8262 GGTATTTACGACACTTTGAAAGAGTGTGCCATGATTTCCAAGACTGCAGGTGGTGTTGGT 8203
Query 53429 ATCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCC 53488
| || | || | ||| | | ||| | || || || ||||| |
Sbjct 8202 CTTCATATCAACAATATTCGTTCCACAGGCTCTTATATTGCAGGTACCAACGGTACTTCA 8143
Query 53489 GATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGT 53548
| || | | || ||| |||| |||||||||||||| || || ||||| |||| |||
Sbjct 8142 AACGGGTTGATTCCCATGATCCGTGTCTTCAACAACACTGCACGTTACGTGGACCAAGGT 8083
Query 53549 GGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATG 53608
||| ||| | || | || ||| | | | | ||||| ||||| || ||||| |
Sbjct 8082 GGTAACAAGAGACCCGGTGCCTTTGCCCTTTTCTTGGAGCCATGGCATGCAGACATCTTC 8023
Query 53609 GAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTT 53667
|| ||| |||| | | || ||| ||| | ||||| || || ||| | || ||||
Sbjct 8022 GACTTTGTCGATATCAGAAAGACTCATGGTAAGGAAGAAATTCG-TGCAAGAGATTTGTT 7964
Query 53668 TACAGCTCTGTGGATTCCGGACCTCTTCATG 53698
| ||||| |||||||| || || ||||||
Sbjct 7963 CCCTGCTCTATGGATTCCCGATCTTTTCATG 7933
>seq248
Length=29684
Score = 122 bits (134), Expect = 1e-22
Identities = 335/508 (66%), Gaps = 4/508 (1%)
Strand=Plus/Minus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-TACACGCGTGTCCGTGAGACGTAC 53251
||||| | |||||| | ||||| |||||||| || | | || | || || ||
Sbjct 7634 TCATGAGAGTCGCCCTAGGTATTCACGGTGAAAACATTGAGGCCGCTTTA-GAAACCTAT 7576
Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311
|||||||| | ||| |||||||| || ||| | ||||| | ||||||||||||||
Sbjct 7575 AACTTAATGTCTCTAAAATACTTTACTCATGCCTCTCCAACTTTATTCAACGCTGGTACT 7516
Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371
| ||||| ||||| ||| ||| | || || ||||||||||| || || || ||
Sbjct 7515 CCAAAGCCTCAAATGTCCTCCTGTTTCTTAGTTGCAATGAAGGATGATTCCATTGAAGGT 7456
Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431
|| ||||| || | ||||| ||||| || || || | || ||||| ||| |
Sbjct 7455 ATTTACGATACTTTGAAGGAATGTGCTTTGATTTCTAAAACTGCTGGAGGTATTGGTCTA 7396
Query 53432 CACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGAT 53491
|| | ||| | ||||| | |||| | || || || ||||| | |
Sbjct 7395 CATATCCACAACATTCGTGCAACCGGCTCTTACATTGCTGGTACAAACGGGACTTCTAAC 7336
Query 53492 GGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGT 53551
|| | | |||||| |||| ||||||||||| || ||||| || || |||| ||||||
Sbjct 7335 GGGTTAATTCCTATGATCCGTGTCTTCAACAATACTGCCCGTTATGTTGACCAAGGTGGT 7276
Query 53552 GGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAG 53611
||| | || | || || | || | ||||| |||||||| || || | ||
Sbjct 7275 AACAAGAGACCTGGTGCCTTTGCTCTATATTTGGAGCCATGGCACGCTGATATCTTCGAC 7216
Query 53612 TTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTTTAC 53670
|| |||| | | |||||| ||| | ||||| || || ||| | || | || |
Sbjct 7215 TTCATCGACATTAGAAAGAATCACGGTAAGGAAGAAATCCG-TGCGAGAGATTTATTCCC 7157
Query 53671 AGCTCTGTGGATTCCGGACCTCTTCATG 53698
||||| ||| |||| || || ||||||
Sbjct 7156 TGCTCTATGGGTTCCAGATCTTTTCATG 7129
>seq206
Length=37006
Score = 109 bits (120), Expect = 6e-19
Identities = 346/530 (65%), Gaps = 20/530 (4%)
Strand=Plus/Minus
Query 74750 GGCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCC 74809
|||||| || ||| | ||||| ||||||| ||||| || || || || | | ||
Sbjct 14560 GGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAAGGTCAACCC 14501
Query 74810 AGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGAT 74869
||||| | || | |||||||||||| ||||||| |||||| || |||||| |
Sbjct 14500 GGGCATCATACCTCTCTTCTTCAACCAGAAGATGGAGGCGAAGGACCCGGAGAAGAAAAC 14441
Query 74870 GCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC----A 74925
||||||| |||| |||||||| || | || ||||| | || || | ||| |
Sbjct 14440 ACCTTCGATGGACGCGAAGGCGACTAGTCTTTCACCGAACAGCGCGTCTG-CGTCTTGGA 14382
Query 74926 TCCAAGTCTGAGCCCATTCAG-CTTTTCG----TTTGACCGCAGGGACAGTATCGATCGC 74980
|||| | | |||||||| | ||| ||| ||| | |||| || ||||| ||
Sbjct 14381 TCCATCTAAGGGCCCATTCGGCCTTCTCGCAAATTT-----CTGGGATGGTGTCGATGGC 14327
Query 74981 TTGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTA 75040
| ||| | | | | | || | |||||||||| | | || |||| | |||||
Sbjct 14326 GTTGAACAAGAATTCACTTTCCTTTGGATCCTTGATGTAGGTATCGATCAACAAGGAGTA 14267
Query 75041 CGTCTCCGAATGAATCGACTCGTTGAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCTG 75099
|| || |||||||| ||| | | ||| ||| | |||||||| | || || |
Sbjct 14266 GGTTTCGGAATGAATGTTTTCGAT-AGCGATTTGGAAACCGTAGAAACTCTTGGCTTCCG 14208
Query 75100 CAATCTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGG 75159
||||| || || | || |||||| | | | || || |||| || ||||| ||||
Sbjct 14207 GGATCTGGACCTCGGTGGAGAAATTCTCGACCAAGTTTTCGTTGACAATACCGTCGGAGG 14148
Query 75160 CGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCTCATCGTCAGTGAGT---TTGT 75216
||||||| || || || || || ||| ||| | || | || | | | ||||
Sbjct 14147 CGGCGAAGAAGGCAAGGACTCTTGAGATGAAGAACCTTTCGTTTTCGTTCATTCTGTTGT 14088
Query 75217 CCCAATCCTTCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAAA 75266
||| || | | ||| | |||||| || |||||| | |||||||||
Sbjct 14087 TCCAGTCATGGATATCCTTGGACAAATCGATTTCCTCGGCAGTCCAGAAA 14038
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547209994304400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |