Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F000805465.1_202014- 12-19] 878 sequences; 21,919,346 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq365 197 1e-45 seq206 152 4e-32 >seq365 Length=19284 Score = 197 bits (218), Expect = 1e-45 Identities = 562/855 (66%), Gaps = 24/855 (3%) Strand=Plus/Minus Query 4240 TTGAACA-AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTG 4298 ||| ||| ||||||| |||||||| || || |||| |||||||||||| ||||| || Sbjct 18975 TTGGACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTA 18916 Query 4299 CCTTCTAACGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTT-TTC 4357 || | || || || |||||||| ||||| || || || | ||||| | ||| || Sbjct 18915 CCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCTTG 18856 Query 4358 ACACTTTAGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTC 4417 || | ||| || | || || ||| || || || || | || ||| |||| | || Sbjct 18855 TTACCGAA-AGCAACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTC 18797 Query 4418 GCAGTTAATTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCT---TGTTCTAT 4474 ||| || || | || || |||| |||| ||| || | | ||||| || Sbjct 18796 AGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTC---CAAGAAGTATCTTTGTTCAAT 18740 Query 4475 AGTTACGGCTTCTGTGATTATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTA 4534 || || || |||| || | || | | || |||||| || || | Sbjct 18739 TTCCACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAATG 18680 Query 4535 TCCAAACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTT 4594 | ||||| || || ||||| || ||||||||||||||||| | |||| |||||| Sbjct 18679 GGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTT 18620 Query 4595 AGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGA 4654 ||||| ||||| |||||||| | |||||||||||| | ||| || || | |||||| || Sbjct 18619 GGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGA 18560 Query 4655 CCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCT 4714 || || || || | ||||| | || |||||| || |||| || || ||| || Sbjct 18559 ACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGC 18500 Query 4715 GGCTTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACG---CACGGAAT 4771 | | ||||| ||||||| |||| ||||| | || |||| | || || || Sbjct 18499 GTCAGCGTCTTGAATCCATCTTAAAGCCCATTCGGC---CTTCTCACCGATTTCTGGGAT 18443 Query 4772 TGTGTATATAGCGTT---AAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTC 4828 |||| || || || || |||| ||||| || | ||||| | || || || || Sbjct 18442 GGTGTGAATGGCATTGAACAAGAATTCACTTTCTTTA---GGGTCCTTGATGTAGGTATC 18386 Query 4829 TATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAA 4888 || | | | || ||||||| || |||||||| || || || || ||||| || Sbjct 18385 GATCAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAA 18326 Query 4889 GCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTAC 4948 | | || |||| | ||| |||||| | | || |||| || |||||||| || || Sbjct 18325 ACTCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAAC 18266 Query 4949 TATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGG 5008 ||||||||| || || ||||| || | ||| || || || | |||| Sbjct 18265 AATACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTC 18206 Query 5009 CTTAAGT---TTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCA 5065 || | | || ||||||| | | ||| |||| ||||||| ||||||| | ||||| Sbjct 18205 GTTCATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCA 18146 Query 5066 AAACGACGCTTCCGC 5080 || || ||||| || Sbjct 18145 GAAAGAAGCTTCGGC 18131 >seq206 Length=37006 Score = 152 bits (168), Expect = 4e-32 Identities = 565/873 (65%), Gaps = 17/873 (2%) Strand=Plus/Minus Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316 |||||||| ||||| |||| |||||||||||| || || || || | || ||||| ||| Sbjct 14853 TTTTGGTAGTCGGAGACTCTCTTTTCGAAGAAGTTGGTCTTACCGGCCAAGGAAATGTTT 14794 Query 4317 TCCATAAAATCAAACGGATTAGTTG-CGTTGTAATGTTT-TTCACACTTTAGAGCTACAA 4374 ||||| ||||| || || || || | | ||||| | || || || || || || | Sbjct 14793 TCCATGAAATCGAAGGGGTT-GTCGACCTTGTAGTACTTCTTGTTACCGAAG-GCGACCA 14736 Query 4375 GCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTA 4434 || || ||| || || || || | |||||| |||| | ||| || || || | | Sbjct 14735 ACAGTCTGTCTGCGACGAACTCGACGTACTGGTTCATCAAGTCGGCATTCATACCTAGCA 14676 Query 4435 ATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTA 4494 | || || | |||| | || | |||||| || ||||| || |||| | Sbjct 14675 AGGCGACTGGCAAGGCGTCTAGGAAGTATCTTTGTTCGATCTCGACGGCCTCGGTGACGA 14616 Query 4495 TATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAA 4554 | | | | | || || || || || | | ||||| ||||| |||| Sbjct 14615 TTTTCTCGACGATGGCTGGGTCCGGCTTGTTCTTCAAATGGGCGAACAACAAACAGGCAA 14556 Query 4555 AATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCA 4614 | || ||||||||||||||||||| |||| ||||| || || || || ||||||| Sbjct 14555 AGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAACTCGTTGGAGAAGGTCAACCCGGGCA 14496 Query 4615 TTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTT 4674 | | ||||||||| || | ||| || || | ||| || ||||| || ||||| | |||| Sbjct 14495 TCATACCTCTCTTCTTCAACCAGAAGATGGAGGCGAAGGACCCGGAGAAGAAAACACCTT 14436 Query 4675 CTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGC-TGGCTTTGTCTTTAATCCAT 4733 | | || || || || |||| || |||||| ||| | || ||||| |||||| Sbjct 14435 CGATGGACGCGAAGGCGACTAGTCTTTCACCGAAC-AGCGCGTCTGCGTCTTGGATCCAT 14377 Query 4734 TTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTT---AAAT 4790 | | ||||| | || || | || || || |||| || ||||| || Sbjct 14376 CTAAGGGCCCATTCGGCCTTCTCGCAAATTTCTGGGATGGTGTCGATGGCGTTGAACAAG 14317 Query 4791 AATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCA 4850 |||| || |||| ||| || | || || || || || | | | || |||| Sbjct 14316 AATTCAC---TTTCCTTTGGATCCTTGATGTAGGTATCGATCAACAAGGAGTAGGTTTCG 14260 Query 4851 GAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGA 4910 ||||| || ||||| ||||| || || || ||||| || | | ||||| | | || Sbjct 14259 GAATGAATGTTTTCGATAGCGATTTGGAAACCGTAGAAACTCTTGGCTTCCGGGATCTGG 14200 Query 4911 ACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAA 4970 || ||| | | || | || || ||||||||||| || |||||||| ||| || || Sbjct 14199 ACCTCGGTGGAGAAATTCTCGACCAAGTTTTCGTTGACAATACCGTCGGAGGCGGCGAAG 14140 Query 4971 AACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGT---TTTTTCCAGTGG 5027 || || | || || || ||| || ||||| || | | || ||||||| Sbjct 14139 AAGGCAAGGACTCTTGAGATGAAGAACCTTTCGTTTTCGTTCATTCTGTTGTTCCAGTCA 14080 Query 5028 GGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTG 5087 | | ||| || | ||||| | ||| || ||||||| || || || || || ||| Sbjct 14079 TGGATATCCTTGGACAAATCGATTTCCTCGGCAGTCCAGAAAGAGGCCTCGGCACGCTTG 14020 Query 5088 TAC-ATAGACCAAATATCAGGATACTGAATCGG 5119 ||| || | ||| || || | ||||| || || Sbjct 14019 TACGATTG-CCAGATCTCGTGGTACTGGATGGG 13988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427045030302374