Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F000805465.1_202014-
12-19] 878 sequences; 21,919,346 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq165 132 3e-26
seq60 109 4e-19
seq32 109 4e-19
seq43 100 2e-16
>seq165
Length=43850
Score = 132 bits (146), Expect = 3e-26
Identities = 172/235 (73%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| ||||||||||| |||||| || ||||| || ||||||||
Sbjct 16029 TTGCATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTA 16088
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||| | || | |||| || |||||||| |||||||||||||| | || |||||
Sbjct 16089 ATCAGACAGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATC 16148
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGG 44282
|| ||| | ||||||||| || || ||| ||| || ||| | ||||| |||| |
Sbjct 16149 TGGAGGGATACCTTCCTTGTCTTGAATTTTCGACTT-AACGTTGTCGATGGTATCGGAAG 16207
Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| || |||| || || || || || || | ||||| || ||||| |||||
Sbjct 16208 ATTCAACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 16262
Score = 132 bits (146), Expect = 3e-26
Identities = 174/236 (74%), Gaps = 4/236 (2%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || ||||||| ||||||||||| |||||| || ||||||||||||||||| ||
Sbjct 16260 CATACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTC 16319
Query 44167 GG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225
| | || | | |||| || | |||||| |||||||||||||| | || |||||||
Sbjct 16320 AGACAAGGTTCTAC-CGTCTTCTAACTGCTTACCGGCAAAGATCAATCTTTGTTGATCTG 16378
Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGAT 44284
||| | ||||||||| || || ||| ||| || ||| | ||||| |||| |||
Sbjct 16379 GAGGGATACCTTCCTTGTCTTGAATTTTCGACTT-AACGTTGTCGATGGTATCGGAAGAT 16437
Query 44285 TCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGAT 44340
|| || |||| || || || || || || | ||||| ||||| || ||||| ||
Sbjct 16438 TCAACTTCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAAT 16493
Score = 114 bits (126), Expect = 9e-21
Identities = 169/236 (72%), Gaps = 4/236 (2%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || ||||||| ||||||||||| || | ||| ||| || || ||||| ||
Sbjct 15801 TTGCATACCACCTCTCAATCTCAACACCAAATGCAACGTAGACTCTTTCTGAATGTTATA 15860
Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
||| | || | |||| ||||| ||||| |||||||| ||||| | || |||||
Sbjct 15861 ATCAGACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATC 15920
Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTT-CTGCTTCAATGTT-CCTATGGTGTCGGCG 44281
|| ||| | ||||||||| || || || || || | ||| | || |||||||
Sbjct 15921 TGGAGGAATACCTTCCTTGTCTTGAATTTTACT--TTTGACGTTGTCAATAGTGTCGGAA 15978
Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| ||||| | || || ||||| || || || || || ||||| ||||||||
Sbjct 15979 GATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 16034
>seq60
Length=75461
Score = 109 bits (120), Expect = 4e-19
Identities = 165/230 (72%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-C 44169
|| ||||||| |||||| |||| ||| | ||| |||||||||||||||||| || | |
Sbjct 10599 CCACCTCTCAATCTCAAAACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 10540
Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229
| | || |||| |||| ||||| || ||||||||||| | || || || | ||
Sbjct 10539 AAAGTTCTGC-CGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 10481
Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCC 44287
| ||||||||| || ||||| ||| || ||| | || ||||| | |||||
Sbjct 10480 AATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGT--CAATAGTGTCTGAAGATTCA 10423
Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || | ||||| ||||| || || | ||||| ||||| ||||||||
Sbjct 10422 ACTTCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 10373
>seq32
Length=102181
Score = 109 bits (120), Expect = 4e-19
Identities = 165/231 (71%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| ||||||| |||||| |||| ||| || || ||||||||||||||||| ||||
Sbjct 8624 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 8565
Query 44171 A--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228
| ||| | | || |||| ||||| || ||||||||||| | || || || | |
Sbjct 8564 AAAGTT--CTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTG 8507
Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTC 44286
| | ||||||||| || ||||| ||| || ||| | || ||||| | |||||
Sbjct 8506 GAATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGT--CAATAGTGTCAGAAGATTC 8449
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| |||| ||||| ||||| || || | ||||| ||||| ||||||||
Sbjct 8448 AACTTCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCAT 8398
>seq43
Length=88948
Score = 100 bits (110), Expect = 2e-16
Identities = 160/226 (71%), Gaps = 8/226 (4%)
Strand=Plus/Minus
Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167
|| || ||||| | |||||| |||| || | ||| ||||||||||||||||| ||
Sbjct 27047 ATACCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCA 26988
Query 44168 GC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTG 44225
| ||||| | |||| |||| ||||| || ||||||||||| | || ||||| |
Sbjct 26987 GATAGAGTT--CTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGATCAG 26930
Query 44226 AAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGA 44283
|| | ||||||||| || ||||| ||| || ||| | |||||||| | ||
Sbjct 26929 GTGGGATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGT--CAATGGTGTCAGAAGA 26872
Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAG 44329
||| || |||| || || ||||| || || | ||||| ||||||
Sbjct 26871 TTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTCTTAACGAAG 26826
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359986547877726
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |