Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F000805465.1_202014-
12-19] 878 sequences; 21,919,346 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq405 104 2e-17
seq165 98.7 9e-16
>seq405
Length=15789
Score = 104 bits (114), Expect = 2e-17
Identities = 159/225 (71%), Gaps = 4/225 (2%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || | ||| | || |||| ||||| ||| |||||| |||||||||||||| ||
Sbjct 223 GCCACCTCTTAGTCTTAGGACCAAGTGCAGAGTGGACTCCTTTTGAATGTTATAGTCCGA 164
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
| || | |||| || || ||||| ||||| || |||| | ||||||||||| ||
Sbjct 163 CAAAGTTCTGCCGTCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGG 104
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCC 41812
|| || ||| || ||| || || ||| || | || | |||||| |||||
Sbjct 103 AATGCCCTCTTTATCCTGTATCTTACTCTTTACATTGTCG--ATCGTGTCGGAGGACTCG 46
Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATC 41857
||||||| || || || ||||| || | ||||| |||||||||
Sbjct 45 ACCTCCAAAGTAATGGTCTTACCGGTTAAAGTCTTGACGAAAATC 1
>seq165
Length=43850
Score = 98.7 bits (108), Expect = 9e-16
Identities = 151/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710
||||||| ||||| ||| ||| |||||||||||||| || || || || | ||||
Sbjct 15823 AACACCAAATGCAACGTAGACTCTTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCT 15882
Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770
|| || ||||| ||||| || |||| | ||||| || | |||| | ||||||| |
Sbjct 15883 TCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGT-C 15941
Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829
||| |||| || ||| | | | ||||||| || || ||||| | ||||| ||
Sbjct 15942 TTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGT 16001
Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| || || || || || |||||||| |||||
Sbjct 16002 CTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 16034
Score = 89.7 bits (98), Expect = 5e-13
Identities = 149/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710
||||||| || || || |||||||||||||| || || || || || | ||||
Sbjct 16051 AACACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCT 16110
Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770
|| |||||||| ||||| || |||| | ||||| || | || | | ||||||| |
Sbjct 16111 TCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGT-C 16169
Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829
||| |||| | | |||| | | | || ||| || || || |||| ||||| ||
Sbjct 16170 TTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGT 16229
Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||||| |||| ||||| || || ||||||||
Sbjct 16230 TTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 16262
Score = 89.7 bits (98), Expect = 5e-13
Identities = 149/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710
||||||| || || || ||||| || ||||| ||||| || | ||| | ||||
Sbjct 16279 AACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCT 16338
Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770
|| | |||||| ||||| || |||| | ||||| || | || | | ||||||||
Sbjct 16339 TCTAACTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCT 16398
Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829
||| |||| | | |||| | | | || ||| || || || |||| ||||| ||
Sbjct 16399 -TGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTATGGT 16457
Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||||| |||| ||||| ||||||||||||||
Sbjct 16458 TTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 16490
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462298926213600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |