Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq3136 127 4e-24 seq6114 93.3 9e-14 seq2428 87.8 4e-12 >seq3136 Length=29851 Score = 127 bits (140), Expect = 4e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 319813 TCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGC 319872 |||| |||||||||||| ||| |||| | ||||| || ||||||||| |||| Sbjct 5713 TCGATATCGTGTTCCACATAAACAGTGCGACATTCATCCTGAGTGGGGAACCCGTCAACT 5654 Query 319873 TGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACACAGA 319932 ||||| || |||| | ||||| || || ||||| || || || || || ||||| ||| Sbjct 5653 TGGCCATTAGCAATGGATCGCATTAGAGTGGATTTTCCGGCACCATTAGGACCACATAGA 5594 Query 319933 CCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCACCA 319992 || || | | || || |||| | || | || ||||| || | ||||| ||||| Sbjct 5593 CCATATCTCCTACCTCGCTTCAACCTCAATTGAGTCTTGTTTAGTAATATTTTGGCACCA 5534 Query 319993 TATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030 ||||||| ||||||||||||| ||||| ||| ||||| Sbjct 5533 TATGCCAAGGAAAATTCACAATTACACAAATCTTCACC 5496 >seq6114 Length=709 Score = 93.3 bits (102), Expect = 9e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 318991 TCTTTGTCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGA 319050 || || ||||||||| | |||||||||||||||||| || ||||| || |||||||| Sbjct 399 TCCTTATCTTCACCGAATTGATAACGCCATTGGATATATTGATTGGGGGTTTTGTCAAGA 340 Query 319051 TGATCCTCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGC 319110 ||| || | || ||||| ||||| || || || || |||| ||| | | ||||| Sbjct 339 TGACGTTCTAAATGATGGAAGGCATGTTGGGCAACATAGGCAACACGTAACATAGGATGT 280 Query 319111 TTCCAAACACTACCGATGGTGGCTTCCATTTGTCCCGTGAGCACCTTAATGAGGGTGCTT 319170 ||| | || ||| | |||| ||||| || || || | |||||| | || | Sbjct 279 TTCAATACTTCACCATTAGTGGGAGGCATTTCACCAGTAAGAATCTTAATCATAGTAGAT 220 Query 319171 TTCCCCGCACCGTT 319184 || || |||||||| Sbjct 219 TTACCAGCACCGTT 206 >seq2428 Length=31152 Score = 87.8 bits (96), Expect = 4e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 319813 TCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGC 319872 |||| ||||||||||| ||| | || | |||| || |||||| || |||| Sbjct 5629 TCGATGTCGTGTTCCACATAAACGGTGCGACATTCATCTTGAGTGGGGAAGCCGTCAACT 5570 Query 319873 TGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACACAGA 319932 || || || ||| | ||||| || || ||||| || || || || |||||||| ||| Sbjct 5569 TGACCATTGGCAACCGAACGCATTAGAGTGGATTTCCCAGCACCATTAGGCCCACATAGA 5510 Query 319933 CCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCACCA 319992 || || | | || | ||||| | | | || ||||| || | || || ||||| Sbjct 5509 CCATACCTTCTACCCCTTTTCAACCTTAGTTGAGTTTTGTTTAGCAAGATCTTGGCACCA 5450 Query 319993 TATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030 ||||||| |||||| ||||| | ||| | ||| ||||| Sbjct 5449 TATGCCAAAGAAAACTCACAGTTACATAAATCTTCACC 5412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057703117492970