Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq3136 127 4e-24
seq6114 93.3 9e-14
seq2428 87.8 4e-12
>seq3136
Length=29851
Score = 127 bits (140), Expect = 4e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 319813 TCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGC 319872
|||| |||||||||||| ||| |||| | ||||| || ||||||||| ||||
Sbjct 5713 TCGATATCGTGTTCCACATAAACAGTGCGACATTCATCCTGAGTGGGGAACCCGTCAACT 5654
Query 319873 TGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACACAGA 319932
||||| || |||| | ||||| || || ||||| || || || || || ||||| |||
Sbjct 5653 TGGCCATTAGCAATGGATCGCATTAGAGTGGATTTTCCGGCACCATTAGGACCACATAGA 5594
Query 319933 CCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCACCA 319992
|| || | | || || |||| | || | || ||||| || | ||||| |||||
Sbjct 5593 CCATATCTCCTACCTCGCTTCAACCTCAATTGAGTCTTGTTTAGTAATATTTTGGCACCA 5534
Query 319993 TATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030
||||||| ||||||||||||| ||||| ||| |||||
Sbjct 5533 TATGCCAAGGAAAATTCACAATTACACAAATCTTCACC 5496
>seq6114
Length=709
Score = 93.3 bits (102), Expect = 9e-14
Identities = 137/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 318991 TCTTTGTCTTCACCGGAGGCATAACGCCATTGGATATACTGGTTGGGTGTCATGTCAAGA 319050
|| || ||||||||| | |||||||||||||||||| || ||||| || ||||||||
Sbjct 399 TCCTTATCTTCACCGAATTGATAACGCCATTGGATATATTGATTGGGGGTTTTGTCAAGA 340
Query 319051 TGATCCTCGATGTGGTGGAAAGCATGCTGTGCCACGTAAGCAAGACGCATATTTGGATGC 319110
||| || | || ||||| ||||| || || || || |||| ||| | | |||||
Sbjct 339 TGACGTTCTAAATGATGGAAGGCATGTTGGGCAACATAGGCAACACGTAACATAGGATGT 280
Query 319111 TTCCAAACACTACCGATGGTGGCTTCCATTTGTCCCGTGAGCACCTTAATGAGGGTGCTT 319170
||| | || ||| | |||| ||||| || || || | |||||| | || |
Sbjct 279 TTCAATACTTCACCATTAGTGGGAGGCATTTCACCAGTAAGAATCTTAATCATAGTAGAT 220
Query 319171 TTCCCCGCACCGTT 319184
|| || ||||||||
Sbjct 219 TTACCAGCACCGTT 206
>seq2428
Length=31152
Score = 87.8 bits (96), Expect = 4e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 319813 TCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGC 319872
|||| ||||||||||| ||| | || | |||| || |||||| || ||||
Sbjct 5629 TCGATGTCGTGTTCCACATAAACGGTGCGACATTCATCTTGAGTGGGGAAGCCGTCAACT 5570
Query 319873 TGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACACAGA 319932
|| || || ||| | ||||| || || ||||| || || || || |||||||| |||
Sbjct 5569 TGACCATTGGCAACCGAACGCATTAGAGTGGATTTCCCAGCACCATTAGGCCCACATAGA 5510
Query 319933 CCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCACCA 319992
|| || | | || | ||||| | | | || ||||| || | || || |||||
Sbjct 5509 CCATACCTTCTACCCCTTTTCAACCTTAGTTGAGTTTTGTTTAGCAAGATCTTGGCACCA 5450
Query 319993 TATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030
||||||| |||||| ||||| | ||| | ||| |||||
Sbjct 5449 TATGCCAAAGAAAACTCACAGTTACATAAATCTTCACC 5412
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057703117492970
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |