Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq3379 163 3e-35
seq2421 96.9 4e-15
>seq3379
Length=20444
Score = 163 bits (180), Expect = 3e-35
Identities = 302/441 (68%), Gaps = 8/441 (2%)
Strand=Plus/Plus
Query 16955 AACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAA 17014
|||| || ||| || || ||| || || || |||||||||| ||| | ||||| ||
Sbjct 692 AACAACAAACAGGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAACTCGTTGGAG 751
Query 17015 AATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCA 17074
|| ||||||||||||||| | |||| ||||| ||||| || || | |||||| |||||
Sbjct 752 AAGGTCAACCCGGGCATCATACCTCTCTTCTTCAACCAGAAGATGGAGGCGAAGGACCCG 811
Query 17075 GAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCT 17134
|| ||||| | ||| |||| ||| || || |||| || || ||| || || |||||||
Sbjct 812 GAGAAGAAAACACCTTCGATGGACGCGAAGGCGACTAGTCTTTCACCGAACAGCGCGTCT 871
Query 17135 TTGTTACGAATCCATTTCTGCACCCACTCGG-CTTTTTGC---TTTATGCAATCCATCGT 17190
|| | |||||| | | |||| |||| ||| | || ||| || || ||
Sbjct 872 GCGTCTTGGATCCATCTAAGGGCCCATTCGGCCTTCTCGCAAATTTCTG----GGATGGT 927
Query 17191 TTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAG 17250
|| ||||| || || || || |||||| | | || | || || |||||||| |
Sbjct 928 GTCGATGGCGTTGAACAAGAATTCACTTTCCTTTGGATCCTTGATGTAGGTATCGATCAA 987
Query 17251 TAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCG 17310
| | ||| ||||||| || ||||| || || || || || || ||||| || |
Sbjct 988 CAAGGAGTAGGTTTCGGAATGAATGTTTTCGATAGCGATTTGGAAACCGTAGAAACTCTT 1047
Query 17311 GGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCC 17370
|||||||| || || || || | |||| || | | |||||||| || || ||
Sbjct 1048 GGCTTCCGGGATCTGGACCTCGGTGGAGAAATTCTCGACCAAGTTTTCGTTGACAATACC 1107
Query 17371 GTCGCTCGCGGCGAAAAACGC 17391
|||| |||||||| || ||
Sbjct 1108 GTCGGAGGCGGCGAAGAAGGC 1128
>seq2421
Length=19268
Score = 96.9 bits (106), Expect = 4e-15
Identities = 290/444 (65%), Gaps = 14/444 (3%)
Strand=Plus/Plus
Query 16955 AACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAA 17014
|||| || ||||| || ||| || || || |||||||| | ||| | |||||| |||
Sbjct 3954 AACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAA 4013
Query 17015 AATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCA 17074
|| || || ||||||||| | |||| || || ||||| || || | ||| || || ||
Sbjct 4014 AAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCG 4073
Query 17075 GAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCT 17134
|| || || | ||| || | ||| ||||| || | || || ||| | || |||||
Sbjct 4074 GAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCA 4133
Query 17135 TTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTT----GCTTTATGCAATCCATCGT 17190
|| |||||||| | |||| ||||| || | | ||| || || ||
Sbjct 4134 GCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATG----GT 4189
Query 17191 TTCTATGGCCTTAAATAAT--TTCTCTTTTTCCTGTAGG-TCGATTATATACGTATCGAT 17247
| ||||| || || || ||| |||| || |||| || | || || ||||||||
Sbjct 4190 GTGAATGGCATTGAACAAGAATTCACTTT---CTTTAGGGTCCTTGATGTAGGTATCGAT 4246
Query 17248 GAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCA 17307
| | | ||| |||| ||||| || || || || || || || ||||| || |
Sbjct 4247 CAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACT 4306
Query 17308 TCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGAT 17367
|| || | ||||| ||||| | |||| ||| | | ||||| || || ||
Sbjct 4307 CTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAAT 4366
Query 17368 GCCGTCGCTCGCGGCGAAAAACGC 17391
||||| ||||||||||| ||
Sbjct 4367 ACCGTCAGAAGCGGCGAAAAAGGC 4390
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517487900134920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |