Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq3379 163 3e-35 seq2421 96.9 4e-15 >seq3379 Length=20444 Score = 163 bits (180), Expect = 3e-35 Identities = 302/441 (68%), Gaps = 8/441 (2%) Strand=Plus/Plus Query 16955 AACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAA 17014 |||| || ||| || || ||| || || || |||||||||| ||| | ||||| || Sbjct 692 AACAACAAACAGGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAACTCGTTGGAG 751 Query 17015 AATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCA 17074 || ||||||||||||||| | |||| ||||| ||||| || || | |||||| ||||| Sbjct 752 AAGGTCAACCCGGGCATCATACCTCTCTTCTTCAACCAGAAGATGGAGGCGAAGGACCCG 811 Query 17075 GAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCT 17134 || ||||| | ||| |||| ||| || || |||| || || ||| || || ||||||| Sbjct 812 GAGAAGAAAACACCTTCGATGGACGCGAAGGCGACTAGTCTTTCACCGAACAGCGCGTCT 871 Query 17135 TTGTTACGAATCCATTTCTGCACCCACTCGG-CTTTTTGC---TTTATGCAATCCATCGT 17190 || | |||||| | | |||| |||| ||| | || ||| || || || Sbjct 872 GCGTCTTGGATCCATCTAAGGGCCCATTCGGCCTTCTCGCAAATTTCTG----GGATGGT 927 Query 17191 TTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAG 17250 || ||||| || || || || |||||| | | || | || || |||||||| | Sbjct 928 GTCGATGGCGTTGAACAAGAATTCACTTTCCTTTGGATCCTTGATGTAGGTATCGATCAA 987 Query 17251 TAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCG 17310 | | ||| ||||||| || ||||| || || || || || || ||||| || | Sbjct 988 CAAGGAGTAGGTTTCGGAATGAATGTTTTCGATAGCGATTTGGAAACCGTAGAAACTCTT 1047 Query 17311 GGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCC 17370 |||||||| || || || || | |||| || | | |||||||| || || || Sbjct 1048 GGCTTCCGGGATCTGGACCTCGGTGGAGAAATTCTCGACCAAGTTTTCGTTGACAATACC 1107 Query 17371 GTCGCTCGCGGCGAAAAACGC 17391 |||| |||||||| || || Sbjct 1108 GTCGGAGGCGGCGAAGAAGGC 1128 >seq2421 Length=19268 Score = 96.9 bits (106), Expect = 4e-15 Identities = 290/444 (65%), Gaps = 14/444 (3%) Strand=Plus/Plus Query 16955 AACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAA 17014 |||| || ||||| || ||| || || || |||||||| | ||| | |||||| ||| Sbjct 3954 AACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAA 4013 Query 17015 AATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCA 17074 || || || ||||||||| | |||| || || ||||| || || | ||| || || || Sbjct 4014 AAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCG 4073 Query 17075 GAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCT 17134 || || || | ||| || | ||| ||||| || | || || ||| | || ||||| Sbjct 4074 GAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCA 4133 Query 17135 TTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTT----GCTTTATGCAATCCATCGT 17190 || |||||||| | |||| ||||| || | | ||| || || || Sbjct 4134 GCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATG----GT 4189 Query 17191 TTCTATGGCCTTAAATAAT--TTCTCTTTTTCCTGTAGG-TCGATTATATACGTATCGAT 17247 | ||||| || || || ||| |||| || |||| || | || || |||||||| Sbjct 4190 GTGAATGGCATTGAACAAGAATTCACTTT---CTTTAGGGTCCTTGATGTAGGTATCGAT 4246 Query 17248 GAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCA 17307 | | | ||| |||| ||||| || || || || || || || ||||| || | Sbjct 4247 CAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACT 4306 Query 17308 TCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGAT 17367 || || | ||||| ||||| | |||| ||| | | ||||| || || || Sbjct 4307 CTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAAT 4366 Query 17368 GCCGTCGCTCGCGGCGAAAAACGC 17391 ||||| ||||||||||| || Sbjct 4367 ACCGTCAGAAGCGGCGAAAAAGGC 4390 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517487900134920