Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq3379 104 2e-17
seq2421 96.9 4e-15
>seq3379
Length=20444
Score = 104 bits (114), Expect = 2e-17
Identities = 233/350 (67%), Gaps = 0/350 (0%)
Strand=Plus/Plus
Query 16193 AACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAA 16252
|||| | ||| || |||||| || | ||||||||||||| ||| | ||||||||
Sbjct 692 AACAACAAACAGGCAAAGTCGGTGTGCAAACCTTCGTCTCTGCAGATCAACTCGTTGGAG 751
Query 16253 AAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCC 16312
|| || ||||| ||||| | |||| ||||| |||||||| || | || || |||||
Sbjct 752 AAGGTCAACCCGGGCATCATACCTCTCTTCTTCAACCAGAAGATGGAGGCGAAGGACCCG 811
Query 16313 GAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCT 16372
|| ||||| | ||| || | || || || |||| || || ||| || || || |||
Sbjct 812 GAGAAGAAAACACCTTCGATGGACGCGAAGGCGACTAGTCTTTCACCGAACAGCGCGTCT 871
Query 16373 TTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCT 16432
| | |||||| | | |||||||||| || | || || || ||
Sbjct 872 GCGTCTTGGATCCATCTAAGGGCCCATTCGGCCTTCTCGCAAATTTCTGGGATGGTGTCG 931
Query 16433 ATGGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAA 16492
||||| || ||||| || |||||| ||| | || || ||||| |||| ||
Sbjct 932 ATGGCGTTGAACAAGAATTCACTTTCCTTTGGATCCTTGATGTAGGTATCGATCAACAAG 991
Query 16493 CTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAA 16542
||| |||| || || ||||| || || || || || || || |||||
Sbjct 992 GAGTAGGTTTCGGAATGAATGTTTTCGATAGCGATTTGGAAACCGTAGAA 1041
>seq2421
Length=19268
Score = 96.9 bits (106), Expect = 4e-15
Identities = 281/432 (65%), Gaps = 8/432 (2%)
Strand=Plus/Plus
Query 16202 CACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAAC 16261
|| || |||||| || | ||||||||||| | ||| | |||||||||||| |||||
Sbjct 3963 CATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAAAAGGTTAAA 4022
Query 16262 CCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAAT 16321
|| ||||| | |||| || || |||||||| || | ||||| || || || || ||
Sbjct 4023 CCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCGGAGAAAAAG 4082
Query 16322 ATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGA 16381
| ||| |||| || ||||| || | || || ||| | || || || | ||
Sbjct 4083 ACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCAGCGTCTTGA 4142
Query 16382 ATCCATTTCTGTACCCATTCGGCTTTTT----GTTTTATACAATCCATCGTTTCTATGGC 16437
|||||| | |||||||||| || | | ||| | || || | |||||
Sbjct 4143 ATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCT----GGGATGGTGTGAATGGC 4198
Query 16438 CTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTA 16497
|| ||||| || |||| | | || | || || ||||| |||| || |||
Sbjct 4199 ATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAGGTATCGATCAACAAGGAGTA 4258
Query 16498 CATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGC 16557
|||| ||||| || || || || || || || || ||||| | ||||| |
Sbjct 4259 AGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACTCTTTGCCTCTGG 4318
Query 16558 TATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGC 16617
||||| ||||| | | || ||| ||| ||| ||||| || ||||||||| ||
Sbjct 4319 AATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAATACCGTCAGAAGC 4378
Query 16618 AGCAAAAAACGC 16629
|| ||||| ||
Sbjct 4379 GGCGAAAAAGGC 4390
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511357383687080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |