Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_001317.1 Length=30624 Score E Sequences producing significant alignments: (Bits) Value seq1378 187 5e-43 >seq1378 Length=479 Score = 187 bits (206), Expect = 5e-43 Identities = 285/402 (71%), Gaps = 27/402 (7%) Strand=Plus/Plus Query 19955 ACGGCCAGCGGCAAGCCCGTCCCGCAAATGACACTAACTCGCAACGATGGTGACCGTCAT 20014 ||||||||||| || ||| | || || |||| | || || | || |||||||| || Sbjct 99 ACGGCCAGCGGTAAACCCATTCCACAGCTGACGATTACACGACAGGACGGTGACCGCCA- 157 Query 20015 CAGTTT--GCTATTGCCGACCGTGGGGCTTACACCGGCGTAACCGCAAAATGGTTGCACA 20072 || || || || || ||||| || || || |||||||| || || | ||| |||| | Sbjct 158 CACCTTCAGC-ATCGCTGACCGGGGCGCATATACCGGCGTGACGGCCAGCTGGCTGCATA 216 Query 20073 CCAAAGACCCGAAGCCGCAAAAGCAGAAAGTAACACTGAAACGCAAGCCAAAAGAGAAGC 20132 ||| ||| ||||||||| ||||| |||| | ||||||||||| ||| || | Sbjct 217 CCAGAGATCCGAAGCCGAAAAAG------GTAAAGGTCAAACGCAAGCCGCGAGAAAAAC 270 Query 20133 ACCTGCGCGCACTGGAGCACCCGAAAGCAAAGCCAGTCAGCAAAAAGACAAAGGCC---A 20189 |||||||||| |||||||| || || || ||||| ||||| | Sbjct 271 ACCTGCGCGCCTTGGAGCACACGGCGGCGAA------------AAAGAAAAAGGTGGTTA 318 Query 20190 AAAAAGAGCCGGAAGCGCGCGAGGGTGAGTATATGGCCGGTGAGGCCGATAACGTGCTGG 20249 |||| ||||||||| |||||||| || ||| |||||| | ||||||||| | Sbjct 319 CAAAAACGCCGGAAGCACGCGAGGGGGATTATCTGGCCGCCACCGAAGATAACGTGTTTA 378 Query 20250 CGCTGACGACGGTCTACGCT-TCTAAGGCGCAGGCGATGCGTGCCGCTCAGGCTAAGTGG 20308 |||| | ||||| ||||| || ||| ||| | ||||||| ||||| |||| || ||| Sbjct 379 TGCTGCCCACGGTTTACGCCATCAAAGCCGCCG-CGATGCGCGCCGCAAAGGCCAAATGG 437 Query 20309 GATAAGCTGCAGCGAGGCGTTGCGGAGTTTTCAATTACGCTG 20350 || ||||||||||| || ||||| |||||||| | |||||| Sbjct 438 GACAAGCTGCAGCGGGGTGTTGCTGAGTTTTCGCTGACGCTG 479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97864833731708