Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_001317.1
Length=30624
Score E
Sequences producing significant alignments: (Bits) Value
seq1378 187 5e-43
>seq1378
Length=479
Score = 187 bits (206), Expect = 5e-43
Identities = 285/402 (71%), Gaps = 27/402 (7%)
Strand=Plus/Plus
Query 19955 ACGGCCAGCGGCAAGCCCGTCCCGCAAATGACACTAACTCGCAACGATGGTGACCGTCAT 20014
||||||||||| || ||| | || || |||| | || || | || |||||||| ||
Sbjct 99 ACGGCCAGCGGTAAACCCATTCCACAGCTGACGATTACACGACAGGACGGTGACCGCCA- 157
Query 20015 CAGTTT--GCTATTGCCGACCGTGGGGCTTACACCGGCGTAACCGCAAAATGGTTGCACA 20072
|| || || || || ||||| || || || |||||||| || || | ||| |||| |
Sbjct 158 CACCTTCAGC-ATCGCTGACCGGGGCGCATATACCGGCGTGACGGCCAGCTGGCTGCATA 216
Query 20073 CCAAAGACCCGAAGCCGCAAAAGCAGAAAGTAACACTGAAACGCAAGCCAAAAGAGAAGC 20132
||| ||| ||||||||| ||||| |||| | ||||||||||| ||| || |
Sbjct 217 CCAGAGATCCGAAGCCGAAAAAG------GTAAAGGTCAAACGCAAGCCGCGAGAAAAAC 270
Query 20133 ACCTGCGCGCACTGGAGCACCCGAAAGCAAAGCCAGTCAGCAAAAAGACAAAGGCC---A 20189
|||||||||| |||||||| || || || ||||| ||||| |
Sbjct 271 ACCTGCGCGCCTTGGAGCACACGGCGGCGAA------------AAAGAAAAAGGTGGTTA 318
Query 20190 AAAAAGAGCCGGAAGCGCGCGAGGGTGAGTATATGGCCGGTGAGGCCGATAACGTGCTGG 20249
|||| ||||||||| |||||||| || ||| |||||| | ||||||||| |
Sbjct 319 CAAAAACGCCGGAAGCACGCGAGGGGGATTATCTGGCCGCCACCGAAGATAACGTGTTTA 378
Query 20250 CGCTGACGACGGTCTACGCT-TCTAAGGCGCAGGCGATGCGTGCCGCTCAGGCTAAGTGG 20308
|||| | ||||| ||||| || ||| ||| | ||||||| ||||| |||| || |||
Sbjct 379 TGCTGCCCACGGTTTACGCCATCAAAGCCGCCG-CGATGCGCGCCGCAAAGGCCAAATGG 437
Query 20309 GATAAGCTGCAGCGAGGCGTTGCGGAGTTTTCAATTACGCTG 20350
|| ||||||||||| || ||||| |||||||| | ||||||
Sbjct 438 GACAAGCTGCAGCGGGGTGTTGCTGAGTTTTCGCTGACGCTG 479
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 97864833731708
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |