Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_001895.1
Length=33593
Score E
Sequences producing significant alignments: (Bits) Value
seq1378 172 1e-38
seq4801 156 9e-34
>seq1378
Length=479
Score = 172 bits (190), Expect = 1e-38
Identities = 290/415 (70%), Gaps = 16/415 (4%)
Strand=Plus/Plus
Query 23343 CTGTTGTTTCTCAAAGCGGGGCAGGGAGTGACGGCCAGCGGTaaaaaaaTCCCGCAGGTC 23402
||| ||||||| ||||| || || ||||||||||||||| || || ||| |
Sbjct 69 CTGCTGTTTCTGCGTCCGGGGAGCGGCGTCACGGCCAGCGGTAAACCCATTCCACAGCTG 128
Query 23403 ACCATAACCCG-CAGCGACGGCGACCGCCA-TCATTTTGCGATTGCTGACCGTGGAGCCT 23460
|| || || || ||| ||||| |||||||| | || || || |||||||| || || |
Sbjct 129 ACGATTACACGACAG-GACGGTGACCGCCACACCTTCAGC-ATCGCTGACCGGGGCGCAT 186
Query 23461 ACACCGGTGTAACGGCAAAATGGCTACACACTAAAGACCCGAAGCCGCAAAAGCAGAAGG 23520
| ||||| || ||||| | ||||| || || | ||| ||||||||| || ||||
Sbjct 187 ATACCGGCGTGACGGCCAGCTGGCTGCATACCAGAGATCCGAAGCCGAAA------AAGG 240
Query 23521 TAAAACTGAAACGCAAAAAGAAAGAGAAACACCTGCGCGCACTGGAGCACCCGAAAGCGA 23580
|||| | |||||||| | ||| |||||||||||||| |||||||| || ||||
Sbjct 241 TAAAGGTCAAACGCAAGCCGCGAGAAAAACACCTGCGCGCCTTGGAGCACACGGCGGCGA 300
Query 23581 AACCGGTCAGGCAGAAGAAAGCGCCTAAAGTACCGGAAGCGCGTGAAGGTGAATACATGG 23640
|| | | | ||| | | ||| |||||||| || || || || || |||
Sbjct 301 AA------AAGAAAAAGGTGGTTACAAAAACGCCGGAAGCACGCGAGGGGGATTATCTGG 354
Query 23641 CCGGTGAGGCTGACAACGTTTTTGCCCTGACCACGGTATATGCCACGAAAGCGCAGGCCA 23700
||| | || ||||| ||| ||| ||||||| || |||| ||||| || |
Sbjct 355 CCGCCACCGAAGATAACGTGTTTATGCTGCCCACGGTTTACGCCATCAAAGCCGCCGCGA 414
Query 23701 TGCGCGCCGCTCAGGCGAAGTGGGATAAACTGCAACGGGGCGTTGCGGAGTTCTC 23755
|||||||||| |||| || ||||| || ||||| ||||| ||||| ||||| ||
Sbjct 415 TGCGCGCCGCAAAGGCCAAATGGGACAAGCTGCAGCGGGGTGTTGCTGAGTTTTC 469
>seq4801
Length=500
Score = 156 bits (172), Expect = 9e-34
Identities = 127/154 (82%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 25560 CACTTGTGATGAATATATTCACGATGAATTGTTAACCAGTCTTTTGACCGGAGTGGGGCG 25619
|| |||| || |||| | ||||| |||||||||||||||||||||| ||||||| |||
Sbjct 18 CATTTGTAATAAATAAACTCACGGTGAATTGTTAACCAGTCTTTTGGTCGGAGTGCTGCG 77
Query 25620 ACGTTGTTTCGTTTTGCCCAAAGTGTGCGAGAGCGGGCGCAATTTGCCCGGACTCAGGAG 25679
| |||||| | | ||||||||||||||||||||| || |||| |||||||||||||| |
Sbjct 78 AGGTTGTTGCATCTTGCCCAAAGTGTGCGAGAGCCGGTTCAATCTGCCCGGACTCAGGTG 137
Query 25680 CGATCTGATTGGTCATGAACCATAAAGTGTATTT 25713
| ||||| | |||||| ||||| | ||||| ||
Sbjct 138 CTATCTGGTCGGTCATAAACCAAAGGGTGTACTT 171
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 107364627472290
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |