Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq4535 118 9e-22
seq4029 109 5e-19
seq2811 107 2e-18
seq3706 100 2e-16
seq4845 95.1 1e-14
seq6788 89.7 4e-13
seq1626 87.8 1e-12
seq3668 84.2 2e-11
>seq4535
Length=12927
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091
|| |||||||| ||| |||| || || || || || || |||||| ||| ||| |
Sbjct 8087 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 8146
Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151
| || || | | | || ||||| || || || || |||||| | || ||
Sbjct 8147 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 8206
Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211
||||||||| | |||||||| || || |||||||||||| | |||| || |||| |||
Sbjct 8207 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 8266
Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|| || ||||||||||||||||| ||| |||| || |||| |||| ||
Sbjct 8267 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 8316
>seq4029
Length=108955
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091
|| |||||||| ||| |||| || || || || || || |||||| ||| ||| |
Sbjct 14066 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCT 14125
Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151
|||| || | | | || ||||| || ||| || || |||||| | || ||
Sbjct 14126 TCAGACACTATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGAC 14185
Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211
||||||||| | |||||||| || || ||||||||||| || |||| || | || |||
Sbjct 14186 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTAC 14245
Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|| || |||||||| || ||| | ||| |||| || |||| |||| ||
Sbjct 14246 AACATCCAAAAGGAGTCCACTTTACACTTGGTTTTGAGATTGAGAGGTGG 14295
>seq2811
Length=58406
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
|||||||| ||| ||||||| | || || || || || ||| || ||| | |
Sbjct 27423 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 27364
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | | | |||| |||||| || || |||||| | || |||||||
Sbjct 27363 GACACTATTGACAACGTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 27304
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|||||| | || ||||| || || ||| ||||||| | ||| || | ||||||||
Sbjct 27303 CAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTACAAC 27244
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
||||| |||||||||||||||||| ||||||| |||| |||| ||
Sbjct 27243 ATTCAGAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 27197
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
||||| || ||| |||| || ||||| || |||||||| || || ||| | |
Sbjct 27651 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTAGAGGTTGAATCTTCC 27592
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | | | | ||| |||||| || || |||||| | || |||||||
Sbjct 27591 GACACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 27532
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|||||| | |||||||| || || || | ||||| | ||| || | || |||||
Sbjct 27531 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAAC 27472
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|| ||||||||||||||||||||| ||||||| |||| |||| ||
Sbjct 27471 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 27425
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
|||||||| ||| ||||||| | || || || || || ||| || ||| | |
Sbjct 27195 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 27136
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | | | ||||| |||||| || || |||||| | || |||||||
Sbjct 27135 GACACTATTGACAACGTCAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 27076
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|||||| | || ||||| || || ||| ||||||| | ||| || | ||||| ||
Sbjct 27075 CAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 27016
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATT 25252
||||| ||||| |||||||||||| | ||||| ||||
Sbjct 27015 ATTCAGAAGGAGTCTACTCTTCACCTTGTGTTGAGATT 26978
>seq3706
Length=333
Score = 100 bits (110), Expect = 2e-16
Identities = 108/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 25119 AAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAA 25178
|||||| || || |||||| | || ||||||||||||| | |||||||| || ||
Sbjct 286 AAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAACAAAGATTGATCTTTGCCGGTAAG 227
Query 25179 CAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCAC 25238
|| || ||||| | ||| || | || ||||| || |||||||||||||||||||||
Sbjct 226 CAGTTAGAAGACGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAATCTACTCTTCAC 167
Query 25239 ATGGTGTTACGATTACGAGGAGG 25261
||||||| |||| |||| ||
Sbjct 166 TTGGTGTTGAGATTGAGAGGTGG 144
>seq4845
Length=48244
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
|||||||| ||| |||| ||| |||| || || ||||| ||| || || | |
Sbjct 16287 ATGCAAATCTTCGTCAAGACACTGACTGGTAAGACCATAACCTTAGAGGTCGAGTCTTCT 16228
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | | | ||||| || ||| || || |||||| | || ||| |||
Sbjct 16227 GACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 16168
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|||||||| || ||||| || || ||| |||| ||| | |||| || | || || ||
Sbjct 16167 CAAAGACTGATTTTTGCTGGTAAGCAACTGGAGGATGGTAGAACTTTGTCAGACTATAAC 16108
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246
|| |||||||| |||||||||||| |||| ||
Sbjct 16107 ATCCAAAAGGAGTCTACTCTTCACTTGGTCTT 16076
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
|||||||| ||| |||| ||| |||| || || ||||| ||| || || | |
Sbjct 16515 ATGCAAATCTTCGTCAAGACACTGACTGGTAAGACCATAACCTTAGAGGTCGAGTCTTCT 16456
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | | | ||||| || ||| || || |||||| | || ||| |||
Sbjct 16455 GACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 16396
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|||||||| || ||||| || || ||| |||| ||| | |||| || | || || ||
Sbjct 16395 CAAAGACTGATTTTTGCTGGTAAGCAACTGGAGGATGGTAGAACTTTGTCAGACTATAAC 16336
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246
|| |||||||| |||||||||||| |||| ||
Sbjct 16335 ATCCAAAAGGAGTCTACTCTTCACTTGGTCTT 16304
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
|||||||| ||| |||| ||| |||| || || ||||| ||| || || | |
Sbjct 16743 ATGCAAATCTTCGTCAAGACACTGACTGGTAAGACCATAACCTTAGAGGTCGAGTCTTCT 16684
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | | | ||||| || ||| || || |||||| | || ||| |||
Sbjct 16683 GACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 16624
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|||||||| || ||||| || || ||| |||| ||| | |||| || | || || ||
Sbjct 16623 CAAAGACTGATTTTTGCTGGTAAGCAACTGGAGGATGGTAGAACTTTGTCAGACTATAAC 16564
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246
|| |||||||| |||||||||||| |||| ||
Sbjct 16563 ATCCAAAAGGAGTCTACTCTTCACTTGGTCTT 16532
>seq6788
Length=110522
Score = 89.7 bits (98), Expect = 4e-13
Identities = 148/214 (69%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 25048 TCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCAGAGACGGTGGCCG 25107
||||||| ||||| || || ||||| || ||| ||| | | || || | | |
Sbjct 41186 TCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCATTGACA 41245
Query 25108 ATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCT 25167
|| ||||| ||| ||| || || |||||| | || || ||||||||| | ||||
Sbjct 41246 ATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAACAAAGATTAATCT 41305
Query 25168 TTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAAT 25227
|||| || || ||||||||||| | ||| || | || |||||||| ||||||||||
Sbjct 41306 TTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAATATCCAAAAGGAAT 41365
Query 25228 CTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
| ||| | || | || || |||| |||| ||
Sbjct 41366 CCACTTTACATTTAGTTTTGAGATTGAGAGGTGG 41399
>seq1626
Length=97905
Score = 87.8 bits (96), Expect = 1e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 25044 TTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCAGAGACGGTG 25103
||| | || || ||||| || |||||||| || ||| ||| | | || || |
Sbjct 62781 TTCGTTAAGACTTTGACTGGTAAAACCATCACTCTAGAAGTTGAATCTTCTGACACCATT 62722
Query 25104 GCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTT 25163
| | || |||| || ||| || ||||||||| | || || ||||||||| |
Sbjct 62721 GACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTG 62662
Query 25164 ATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAG 25223
|||||||| || || ||||||||||| | ||| || |||| ||||| |||||||||
Sbjct 62661 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAAG 62602
Query 25224 GAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
||||| ||| | || | || || |||| |||| ||
Sbjct 62601 GAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 62564
>seq3668
Length=38538
Score = 84.2 bits (92), Expect = 2e-11
Identities = 147/214 (69%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 25048 TCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCAGAGACGGTGGCCG 25107
|||| || ||||| || || ||||| || ||| ||| | | || || | | |
Sbjct 8101 TCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATTGACA 8042
Query 25108 ATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCT 25167
|| ||||| ||| ||| || || |||||| | || || ||||||||| | ||||
Sbjct 8041 ATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTGATCT 7982
Query 25168 TTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAAT 25227
|||| || || ||||||||||| | ||| || | || ||||| |||||||| ||||
Sbjct 7981 TTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAAGAAT 7922
Query 25228 CTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
| ||| | ||| | || || |||| |||| ||
Sbjct 7921 CCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 7888
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410752146259466
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