Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq2898 159 2e-34
seq2601 123 2e-23
>seq2898
Length=39256
Score = 159 bits (176), Expect = 2e-34
Identities = 371/560 (66%), Gaps = 31/560 (6%)
Strand=Plus/Minus
Query 96996 AAACTTTAGTGTTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAAT 97055
|| ||||||| | ||||| || || ||| ||| | | || ||| | | ||||||||
Sbjct 20831 AATCTTTAGTTTCGGGAATGGTCTTGGATTTCTGGAGATTTGTTCTTTCAAGGCATCAAT 20772
Query 97056 GTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATC 97115
||| | ||||| || ||||| || ||||| ||||| || || || || | | ||
Sbjct 20771 GTGGTCTTTATAAACATGTGCATCCCCCAAAGTATGAATGAACTCACCTGGCTCCATGTC 20712
Query 97116 AGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCC 97175
|| | || ||||| | ||| || | || ||| ||||||||||| || || ||
Sbjct 20711 GACAACTTTAGCAATCATTCTAGTCAACAAAGCATATGATGCAATGTTAAACGGTACTCC 20652
Query 97176 TAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAG-----------------C 97218
| ||||||||| || | ||| || || || ||||| |
Sbjct 20651 CAACCCCATATCACAAGAACGTTGGTACAATAAGCATGAAAGGCGGGGCTTACCGGATCC 20592
Query 97219 TT-TCCATC---------ACACACATAAAACTGACTCAATACATGACAGGGGGGCAACGC 97268
|| ||| || || ||||| ||||| || | ||| || || ||||| ||
Sbjct 20591 TTCTCCTTCTTTGGGGAAACTGACATAGAACTGTGAAAAAATATGGCATGGTGGCAAAGC 20532
Query 97269 CATTTTTGGAACATCTAAGACATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTT 97328
|||||| || ||| ||||| |||| ||| | |||||||||||| || ||
Sbjct 20531 CATTTTGTCAAAATCAGCTGGGTTCCAGGCACTCATAATGATTCTTCTATCGTAGGGATT 20472
Query 97329 TGTGTGTATGGTATTAATTATCTGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTG 97388
||| | | ||| ||| | ||| || |||||||||| |||| |||| ||| | ||
Sbjct 20471 TGTCTTAAGTTTATGAATAACCTGTTTCAATTGATCAATACCTTGTCCAGTATAGTCGT- 20413
Query 97389 CTTAAGAC--CTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCA 97446
| | || |||| |||| || ||||||||||||||||| ||||||||||| || ||
Sbjct 20412 CATCGCACGTCTTG-TATTTAGCACCAAAATGCCTCCATTGAAATCCATAAACGGGCCCC 20354
Query 97447 AGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTT 97506
|| |||||| ||| ||||| ||| || | |||||||||||| | |||||||||
Sbjct 20353 AGATCTCCTACTTTCCTATCTTTGAACCCCATCTTATCTAAATATTCACGAGATCCATTA 20294
Query 97507 GCATCCCAAATGTGCACACC 97526
| |||||||| | |||||
Sbjct 20293 CCGTCCCAAATCTTAACACC 20274
>seq2601
Length=276727
Score = 123 bits (136), Expect = 2e-23
Identities = 412/640 (64%), Gaps = 41/640 (6%)
Strand=Plus/Plus
Query 96912 CATTTTTATGCTAGGGTAAGGGTTATAGTTTTCCAGAATAATGTCATTTGCT---TTAAA 96968
||||| || || |||| ||| || |||| ||| ||| | || | || |||||
Sbjct 166253 CATTTGGATTCTTGGGTGAGGATTGTAGTCTTC---AATTTCGAAATCTTCTAACTTAAA 166309
Query 96969 ATCATCAATAGATGCAATCTTTCTGGCAAACTTTAGTGTTGGGAAAGGCCTGGGAGTTCG 97028
|||||||| || ||| | || || ||||| | | ||||| || || ||| ||
Sbjct 166310 GTCATCAATTTCTGTAATGTCCCTTTTAATCTTTAATTTGGGGAATGGTCTTGGATCTCT 166369
Query 97029 CGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGT 97088
| || || || | | |||||||| |||| | ||| | || ||||| || |||||
Sbjct 166370 TGAAATTTGTTCATTCAAGGCATCAATATGATCCTTATACACATGTGCATCCCCCAAAGT 166429
Query 97089 GTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGA 97148
||||| || || || || | | |||| ||| | || ||||| | ||| | ||| |
Sbjct 166430 ATGAATGAACTCACCCGGTTCCATATCAACGACTTTAGCTATCATTCTAGTCAGTAGCGC 166489
Query 97149 ATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTG 97208
||| || || ||||| ||||| || || ||||||||| || | ||| || | |
Sbjct 166490 ATATGAGGCGATATTAAATGGCACACCGAGCCCCATATCACAGGAACGTTGGTACAGCAA 166549
Query 97209 ACAGGAAAG-------------CTT-----TCCATC---------ACACACATAAAACTG 97241
|| ||||| ||| ||| || || |||||||| ||
Sbjct 166550 GCACGAAAGGCGAGGTTTACCACTTCCACTTCCCTCTTTGGGGAAACTGACATAAAATTG 166609
Query 97242 ACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACA 97301
|| | || || || || || ||||| || || |||| |||||||| |
Sbjct 166610 TGAAAAAATGTGGCATGGCGGTAAGGCCATCTTGTCAAAATCTGCAGGGTTCCAAGCGCT 166669
Query 97302 CATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTG 97361
||| | ||||||||||| |||||||| | || | | || | |||||| | ||
Sbjct 166670 CATGATGATTCTTCTATCATAAGGGTTTGTCTTTAATTTGTGTATAACCTGCTTCAGCTG 166729
Query 97362 ATCAACGCCTTCTCCACCATA---ATTGT-GCTTAAGACCTTGATATTCTGCTCCAAAAT 97417
||| | |||| ||| ||| || || || || |||| |||| || |||||||
Sbjct 166730 ATCGATACCTTGTCCGGTATAGTCATCGTCGC---AGGTCTTG-TATTTGGCACCAAAAT 166785
Query 97418 GCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAA 97477
| ||||||||||| ||||||||||| || || || ||| ||| ||||| || || |
Sbjct 166786 GTCTCCATTGGAACCCATAAACAGGACCCAGATCCCCTACTTTCCTATCCATGAGTCCCA 166845
Query 97478 GCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAAT 97517
||| || ||||| | ||||||||| | ||||||||
Sbjct 166846 TCTTGTCCAAATATTCACGAGATCCATTACCGTCCCAAAT 166885
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346746304470830
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |