Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq7783 154 1e-32 seq8071 127 2e-24 seq6248 127 2e-24 seq8630 125 6e-24 seq3354 120 3e-22 seq2811 111 1e-19 seq4483 100 2e-16 seq3379 82.4 7e-11 >seq7783 Length=540 Score = 154 bits (170), Expect = 1e-32 Identities = 169/225 (75%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 |||||| || | | ||| |||||||||| || ||||| || || |||||||| ||| Sbjct 225 ACCTCCACGGAGACGCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGA 166 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 | |||||| ||||||||||| ||||| || |||| || |||||||||||||| || Sbjct 165 AAGAGTGCGGCCGTCCTCGAGCTGCTTTCCTGCAAAGATAAGTCGCTGCTGATCGGGTGG 106 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 ||||| ||||||||| || || || || | |||| |||||| | | |||||| Sbjct 105 GATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGAC 46 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTG 118735 ||||| ||| | || |||||||| ||||| || ||||| ||||| Sbjct 45 CTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTAACAAAGATCTG 1 >seq8071 Length=459 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| |||||||| || || |||||||| || | ||||| |||||| Sbjct 226 ACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCA 285 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || || |||| ||||||||||| || ||||| |||||||||||||| Sbjct 286 AGCTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGG 345 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| |||||| | ||| ||||||| ||| | || ||| Sbjct 346 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTG 405 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 ||||||| || || || ||||| |||||| Sbjct 406 CCGGTCAAGGTCTTGACGAAAATTTGCATG 435 >seq6248 Length=918 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| ||||||| |||||||| || ||||||||||| ||| || ||| || |||||| Sbjct 568 CACAAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGACAGAGTACGGCCATCCTC 509 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 || || |||||||| |||| |||||||| || || ||||| |||||||||||||| Sbjct 508 AAGTTGCTTTCCAGCAAAGATCAGACGCTGTTGGTCTGGAGGAATGCCCTCCTTGTCCTG 449 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| || || || | |||| ||||| | | || ||||||| || | || || Sbjct 448 AATCTTGGTCTTGACGTTGTCGATAGTGTCGGAGGATTCAACCTCGAGTGTGATGGTCTT 389 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| || || || || || || |||||||| Sbjct 388 GCCAGTAAGTGTCTTGACGAAGATCTGCAT 359 Score = 107 bits (118), Expect = 2e-18 Identities = 150/207 (72%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || |||||||| ||| | || || ||||||||| || Sbjct 334 GTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTACGACCATCCTCGAGTTG 275 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC-TGTAATTT 118653 || || ||| |||| | ||||| || || ||||| |||||||||||||| || | | Sbjct 274 CTTGCCGGCGAAGATCAAGCGCTGTTGGTCTGGAGGAATGCCCTCCTTGTCCTGGA--TC 217 Query 118654 TTTGT-TTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCG 118712 || || || || | |||| |||||| | ||||||||||| || | || |||||| Sbjct 216 TTGGTCTTGACATTGTCGATGGTGTCAGAAGACTCGACCTCGAGAGTGATGGTCTTGCCG 157 Query 118713 GTCAGAGTTTTTACAAAAATCTGCATG 118739 || || || || || || ||||||||| Sbjct 156 GTGAGGGTCTTGACGAAGATCTGCATG 130 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 || ||||||||| | || ||||| || || |||||||| || | ||| ||| ||| Sbjct 799 CAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGAGTACGCCCATC 740 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||| ||||| ||||| || |||| |||||||| || || || || || ||||||||||| Sbjct 739 CTCCAGCTGCTTTCCTGCAAAGATAAGACGCTGTTGGTCTGGTGGGATACCCTCCTTGTC 680 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 ||| || || || | |||| ||||| | || ||||||| || | ||| Sbjct 679 CTGAATCTTGGTCTTCACGTTGTCGATAGTGTCTGAAGATTCCACCTCGAGTGTAATCGT 620 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| |||| || || || || || ||||| Sbjct 619 CTTGCCCGTCAAGGTCTTGACGAAGATTTGCAT 587 >seq8630 Length=306 Score = 125 bits (138), Expect = 6e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || ||||||||||| | |||||| ||||||||| || ||||| Sbjct 304 GTGGACTCCTTCTGGATGTTGTAATCAGAGAGAGTGCGACCATCCTCGAGTTGCTTTCCG 245 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| | |||||||| || ||||| || || || ||||||||||| ||| || ||| Sbjct 244 GCGAAAATGAGACGTTGTTGATCAGGTGGGATCCCCTCCTTGTCCTGAATCTTGCTCTTA 185 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| |||||| | ||| ||||||| ||| | || ||||| |||||||| Sbjct 184 ACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTC 125 Query 118722 TTTACAAAAATCTGCAT 118738 || || || |||||||| Sbjct 124 TTGACGAAGATCTGCAT 108 >seq3354 Length=695 Score = 120 bits (132), Expect = 3e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || |||||||| || | ||||| ||||||||||| Sbjct 263 GTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGGCCGTCCTCGAGCTG 322 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| |||| || |||||||| || || || |||||||||||||| ||| || Sbjct 323 CTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGAATCTT 382 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | | || |||||||| | ||| ||||||| ||| | || || || || Sbjct 383 GGCCTTGACATTGTTGATGGTGTCCGAGGACTCCACCTCGAGGGTAATGGTCTTACCCGT 442 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 |||||| || || ||||||||||| Sbjct 443 CAGAGTCTTGACGAAAATCTGCAT 466 >seq2811 Length=58406 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | ||||||||||||||||| | ||||| || ||||| |||||||| || Sbjct 27423 TACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAG 27482 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || || | || || ||||| || || || |||| | | || ||||| |||| Sbjct 27483 ACAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAG 27542 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || ||||||||| |||||| ||||| | |||| |||||| | || | Sbjct 27543 GGATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTGTCGGAAGATTCAA 27602 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | || | ||||| ||||||| ||| || || ||||||||||| Sbjct 27603 CCTCTAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 27651 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || | ||||||||||||||||| | ||||| || || |||||||||||||| Sbjct 27195 TACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAATCAG 27254 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || || | || || || || || || || | || | | || ||||| |||| Sbjct 27255 ACAGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAG 27314 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || ||||||||| |||||| ||| || | || | ||||| | || | Sbjct 27315 GAATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAA 27374 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | ||| | || || || || |||||||| || ||||| ||||| Sbjct 27375 CCTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 27423 >seq4483 Length=688 Score = 100 bits (110), Expect = 2e-16 Identities = 152/213 (71%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||| | || ||||| || || |||||||| ||| | ||||| ||||| Sbjct 432 CACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTC 491 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTG 118647 |||||| || || ||| |||| | |||||||| ||||| || ||||||||||||| ||| Sbjct 492 GAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTG 551 Query 118648 TAATTTTTTGT-TTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTT 118706 | | || || || || | |||| |||||| | ||| ||||| | ||| | || Sbjct 552 GA--TCTTGGTCTTGACATTGTCGATGGTGTCGGACGACTCCACCTCAAGGGTGATAGTC 609 Query 118707 TTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || || || || || || || || ||||||||| Sbjct 610 TTACCCGTGAGGGTCTTGACGAAGATCTGCATG 642 >seq3379 Length=20444 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 44855 GAACGATTGGTCGCATTCGCCATTGTCGAAGGAGTGTTCTTTTCGGGGAGTTTTGCGGCG 44914 ||| || | ||||| ||||| ||||||| || ||||| || ||| || || | Sbjct 855 GAAAGACTAGTCGCCTTCGCGTCCATCGAAGGTGTTTTCTTCTCCGGGTCCTTCGCCTCC 796 Query 44915 ATATTTTACATGAAAACCAAGGGAGTGATGCCCGGACTGACGTTTAGCAACGAATTGATT 44974 || || | |||| | | || |||||||||| |||| || |||||| ||||| Sbjct 795 ATCTTCTGGTTGAAGAAGAGAGGTATGATGCCCGGGTTGACCTTCTCCAACGAGTTGATC 736 Query 44975 TCGAGAGACGAAGGTCTGCACACCAACTTTGCCTG 45009 | |||||||||||| |||||||| |||||||||| Sbjct 735 TGCAGAGACGAAGGTTTGCACACCGACTTTGCCTG 701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433783242499948