Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq4845 113 7e-20 seq4535 113 7e-20 seq4029 113 7e-20 seq2811 111 2e-19 seq3221 107 3e-18 seq6788 104 3e-17 seq1626 104 3e-17 seq3706 95.1 2e-14 seq3668 89.7 8e-13 >seq4845 Length=48244 Score = 113 bits (124), Expect = 7e-20 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| ||||| || ||||| || | |||||| || || || ||||| ||||| Sbjct 16061 CCACCTCTCAGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAGTCTGAC 16120 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | |||||| | ||| || | ||| || ||||||||||||| |||||| || || |||||| Sbjct 16121 AAAGTTCTACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGGA 16180 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| || ||||| Sbjct 16181 ATACCTTCCTTGTCTTG 16197 Score = 113 bits (124), Expect = 7e-20 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| ||||| || ||||| || | |||||| || || || ||||| ||||| Sbjct 16289 CCACCTCTCAGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAGTCTGAC 16348 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | |||||| | ||| || | ||| || ||||||||||||| |||||| || || |||||| Sbjct 16349 AAAGTTCTACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGGA 16408 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| || ||||| Sbjct 16409 ATACCTTCCTTGTCTTG 16425 Score = 113 bits (124), Expect = 7e-20 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| ||||| || ||||| || | |||||| || || || ||||| ||||| Sbjct 16517 CCACCTCTCAGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAGTCTGAC 16576 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | |||||| | ||| || | ||| || ||||||||||||| |||||| || || |||||| Sbjct 16577 AAAGTTCTACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGGA 16636 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| || ||||| Sbjct 16637 ATACCTTCCTTGTCTTG 16653 >seq4535 Length=12927 Score = 113 bits (124), Expect = 7e-20 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | ||| || ||||| |||| ||||||||| || || || || || || Sbjct 8316 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 8257 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | |||||| | ||| || ||||| || |||||||| ||||||||||| || || || ||| Sbjct 8256 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 8197 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 || ||||| || ||||| ||| || ||| ||| ||| Sbjct 8196 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 8137 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATTTT 146280 || || || || || ||||| ||||| || || | ||| |||||||| || Sbjct 8136 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 8087 >seq4029 Length=108955 Score = 113 bits (124), Expect = 7e-20 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | ||| || ||||| |||||||| || || || || || || || || Sbjct 14295 CCACCTCTCAATCTCAAAACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 14236 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | |||||||| || || ||||| || |||||||| ||||||||||| || || || ||| Sbjct 14235 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 14176 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 || ||||| || ||||| ||| |||||| ||| ||| Sbjct 14175 ATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCTGAAGATTCAACT 14116 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATTTT 146280 || || || || || ||||| ||||| || || | ||| |||||||| || Sbjct 14115 TCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 14066 >seq2811 Length=58406 Score = 111 bits (122), Expect = 2e-19 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | ||| || ||||| || | ||||||||| || || || ||||| || Sbjct 27197 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAATCAGAC 27256 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || ||||| | || || | ||| || || ||||||||||||||||| ||||| |||||| Sbjct 27257 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 27316 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 || ||||| || ||||| ||| || ||| ||| || Sbjct 27317 ATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 27376 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 ||||| || || || || ||||||| ||||| | ||| |||||||| Sbjct 27377 TCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 27423 Score = 98.7 bits (108), Expect = 1e-15 Identities = 153/227 (67%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||| || | ||| || || | || | |||||| || || || |||||||| || Sbjct 26969 CCACCCCTCAATCTCAACACAAGGTGAAGAGTAGACTCCTTCTGAATGTTATAATCAGAC 27028 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || ||||| | || || | ||| || || ||||||||||||||||| ||||| |||||| Sbjct 27029 AGCGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 27088 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 || ||||| || ||||| ||| || ||| ||| || Sbjct 27089 ATACCTTCCTTGTCTTGAATTTTCGACTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 27148 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 ||||| || || || || ||||||| ||||| | ||| |||||||| Sbjct 27149 TCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 27195 Score = 89.7 bits (98), Expect = 8e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | ||| || ||||| || | ||||||||| || || || || || || Sbjct 27425 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 27484 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | ||||| | || |||| || || || ||||| ||||||||||| ||||| ||||| Sbjct 27485 AAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 27544 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| || ||||| Sbjct 27545 ATACCTTCCTTGTCTTG 27561 >seq3221 Length=90415 Score = 107 bits (118), Expect = 3e-18 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | ||| || |||||||||||||| ||||| || || || || || || Sbjct 28373 CCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 28314 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 |||||||| | || || ||||| || |||||||| ||||||||||| || || || || Sbjct 28313 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 28254 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| || ||||| Sbjct 28253 ATACCTTCCTTGTCTTG 28237 >seq6788 Length=110522 Score = 104 bits (114), Expect = 3e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | ||| || || ||||||||||| ||||| || ||||| || || || Sbjct 41399 CCACCTCTCAATCTCAAAACTAAATGTAAAGTGGATTCCTTTTGGATATTGTAGTCAGAC 41340 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | ||||| | || || ||||| || |||||||| || |||||||| || || |||||| Sbjct 41339 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGA 41280 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| || ||||| Sbjct 41279 ATACCTTCCTTGTCTTG 41263 >seq1626 Length=97905 Score = 104 bits (114), Expect = 3e-17 Identities = 151/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATT-CTTTAGATATATTATAATCTGA 146109 |||||||| | ||| || || ||||||||||| |||| |||| || || || || || || Sbjct 62564 CCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGA-ATGTTGTAGTCGGA 62622 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | ||||| | || || ||||| || |||||||| ||||||||||| || || || || Sbjct 62623 CAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 62682 Query 146170 AATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTAC 146229 || |||||||| ||||| || || ||| ||| || Sbjct 62683 GATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAAC 62742 Query 146230 TTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAA 146268 |||||| ||||| |||||||| || || || |||| ||| Sbjct 62743 TTCTAGAGTGATGGTTTTACCAGTCAAAGTCTTAACGAA 62781 >seq3706 Length=333 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | ||| || ||||| || | ||||||||| || || || || || || Sbjct 144 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 203 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | ||||| | || ||||| || || || ||||| ||||||||||| ||||| ||||| Sbjct 204 AAGGTTCTACCGTCTTCTAACTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 263 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| || ||||| Sbjct 264 ATACCTTCCTTGTCTTG 280 >seq3668 Length=38538 Score = 89.7 bits (98), Expect = 8e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 |||||||| | ||| || || || || ||||| |||||||| || || || || || Sbjct 7888 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 7947 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | ||||| | || || ||||| || |||||||| ||||||||||| || || || || Sbjct 7948 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 8007 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| || ||||| Sbjct 8008 ATACCTTCCTTGTCTTG 8024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743443506100480